Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_K15
(577 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 200 4e-52
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 198 2e-51
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 198 2e-51
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 129 1e-30
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 129 1e-30
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 129 1e-30
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 129 1e-30
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 129 1e-30
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 129 1e-30
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 129 1e-30
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 129 1e-30
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 129 1e-30
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 129 1e-30
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 129 1e-30
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 129 1e-30
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 129 1e-30
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 129 1e-30
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 129 1e-30
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 129 1e-30
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 129 1e-30
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 128 3e-30
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 128 3e-30
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 122 2e-28
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 106 1e-23
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 82 2e-16
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 64 5e-11
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 60 8e-10
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 55 4e-08
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 53 2e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 52 2e-07
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 50 1e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 48 3e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 48 3e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 48 3e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 48 3e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 47 8e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 47 1e-05
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 46 1e-05
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 46 2e-05
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 46 2e-05
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 44 6e-05
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 44 6e-05
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 44 6e-05
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 44 6e-05
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 44 1e-04
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 43 2e-04
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 42 2e-04
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 42 3e-04
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 40 9e-04
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 39 0.003
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 39 0.003
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 39 0.003
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 38 0.004
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 38 0.004
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 38 0.005
At1g11970.1 68414.m01383 hypothetical protein 35 0.034
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 35 0.045
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 33 0.10
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 33 0.14
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.18
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 31 0.42
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 31 0.42
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 30 1.3
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 1.3
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 30 1.3
At5g12280.1 68418.m01444 hypothetical protein 29 1.7
At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal... 29 2.2
At1g47680.1 68414.m05297 hypothetical protein 29 2.2
At5g11830.1 68418.m01382 hypothetical protein 28 5.1
At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal... 28 5.1
At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) famil... 27 6.8
At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) famil... 27 6.8
At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 27 6.8
At1g78020.1 68414.m09092 senescence-associated protein-related s... 27 9.0
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 200 bits (489), Expect = 4e-52
Identities = 98/151 (64%), Positives = 109/151 (72%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGE 419
STLHLV Y+ P LAVL+FYKVD +GK+ RL++EC
Sbjct: 65 STLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKECPSV 124
Query: 420 QCGAGVFMAVMEDRHYCGKCHSTMVFKDDDK 512
CG G FMA DRHYCGKC +T VFK D+
Sbjct: 125 SCGPGTFMASHFDRHYCGKCGTTYVFKKADE 155
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 198 bits (484), Expect = 2e-51
Identities = 97/149 (65%), Positives = 108/149 (72%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGE 419
STLHLV Y+ P LAVL+FYKVD +GK+ RLR+EC
Sbjct: 65 STLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKECPNA 124
Query: 420 QCGAGVFMAVMEDRHYCGKCHSTMVFKDD 506
CGAG FMA DRHYCGKC T V++ +
Sbjct: 125 TCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 198 bits (483), Expect = 2e-51
Identities = 96/149 (64%), Positives = 108/149 (72%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGE 419
STLHLV Y+ P LAVL+FYK+D +GK+ RLR+EC
Sbjct: 65 STLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKECPNA 124
Query: 420 QCGAGVFMAVMEDRHYCGKCHSTMVFKDD 506
CGAG FMA DRHYCGKC T V++ +
Sbjct: 125 TCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 233 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 292
Query: 240 STLHLV 257
STLHLV
Sbjct: 293 STLHLV 298
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 309 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 368
Query: 240 STLHLV 257
STLHLV
Sbjct: 369 STLHLV 374
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 233 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 292
Query: 240 STLHLV 257
STLHLV
Sbjct: 293 STLHLV 298
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 233 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 292
Query: 240 STLHLV 257
STLHLV
Sbjct: 293 STLHLV 298
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
Score = 58.4 bits (135), Expect = 3e-09
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKE 149
VKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 233 VKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 127 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 273
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 303
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 233 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 292
Query: 240 STLHLV 257
STLHLV
Sbjct: 293 STLHLV 298
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 309 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 368
Query: 240 STLHLV 257
STLHLV
Sbjct: 369 STLHLV 374
Score = 58.4 bits (135), Expect = 3e-09
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKE 149
VKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 385 VKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 127 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 273
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 233 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 292
Query: 240 STLHLV 257
STLHLV
Sbjct: 293 STLHLV 298
Score = 58.4 bits (135), Expect = 3e-09
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKE 149
VKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 309 VKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 127 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 273
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 233 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 292
Query: 240 STLHLV 257
STLHLV
Sbjct: 293 STLHLV 298
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 309 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 368
Query: 240 STLHLV 257
STLHLV
Sbjct: 369 STLHLV 374
Score = 58.4 bits (135), Expect = 3e-09
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKE 149
VKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 385 VKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 127 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 273
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 233 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 292
Query: 240 STLHLV 257
STLHLV
Sbjct: 293 STLHLV 298
Score = 58.4 bits (135), Expect = 3e-09
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKE 149
VKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 309 VKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 31.5 bits (68), Expect = 0.42
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 127 KLKFKTKRESLPINRG*SLLESSWKMDVPSRTTISRRNPPSTWC*GFVV 273
K K + K L + S LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 233 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 292
Query: 240 STLHLV 257
STLHLV
Sbjct: 293 STLHLV 298
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 233 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 292
Query: 240 STLHLV 257
STLHLV
Sbjct: 293 STLHLV 298
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 91.5 bits (217), Expect = 4e-19
Identities = 40/66 (60%), Positives = 53/66 (80%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 81 VKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGG 140
Query: 240 STLHLV 257
S LHLV
Sbjct: 141 SVLHLV 146
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 126 bits (304), Expect = 1e-29
Identities = 61/66 (92%), Positives = 64/66 (96%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKE IPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 156 VKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKE 215
Query: 240 STLHLV 257
STLHLV
Sbjct: 216 STLHLV 221
Score = 122 bits (294), Expect = 2e-28
Identities = 61/66 (92%), Positives = 64/66 (96%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+D NIQKE
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKE 139
Query: 240 STLHLV 257
STLHLV
Sbjct: 140 STLHLV 145
Score = 91.1 bits (216), Expect = 5e-19
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 206
VKTLTGKTITLEVE S TI+NVKAKIQDKEGIPP+QQRLIFAGKQLE G
Sbjct: 232 VKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 129 bits (312), Expect = 1e-30
Identities = 62/66 (93%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 64
Query: 240 STLHLV 257
STLHLV
Sbjct: 65 STLHLV 70
Score = 94.7 bits (225), Expect = 4e-20
Identities = 41/66 (62%), Positives = 54/66 (81%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 81 VKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGG 140
Query: 240 STLHLV 257
S LHLV
Sbjct: 141 SVLHLV 146
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 128 bits (309), Expect = 3e-30
Identities = 61/66 (92%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 81 VKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 140
Query: 240 STLHLV 257
STLHLV
Sbjct: 141 STLHLV 146
Score = 123 bits (297), Expect = 7e-29
Identities = 60/66 (90%), Positives = 63/66 (95%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEGI P+QQRLIFAGKQ EDGRTL+DYNIQKE
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKE 216
Query: 240 STLHLV 257
STLHLV
Sbjct: 217 STLHLV 222
Score = 113 bits (273), Expect = 6e-26
Identities = 53/66 (80%), Positives = 61/66 (92%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
+KTLTGKT LEVE SDTI+NVKAKIQD EGIPP+Q RLIFAGKQLEDGRTL+DYN+Q++
Sbjct: 5 LKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQED 64
Query: 240 STLHLV 257
STLHL+
Sbjct: 65 STLHLL 70
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 128 bits (308), Expect = 3e-30
Identities = 60/66 (90%), Positives = 65/66 (98%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PP+QQRLIFAGKQL+DGRTL+DYNIQKE
Sbjct: 83 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKE 142
Query: 240 STLHLV 257
STLHLV
Sbjct: 143 STLHLV 148
Score = 121 bits (291), Expect = 4e-28
Identities = 58/66 (87%), Positives = 62/66 (93%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
V+TLT KTI LEVE SDT +NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 159 VRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKE 218
Query: 240 STLHLV 257
STLHLV
Sbjct: 219 STLHLV 224
Score = 112 bits (269), Expect = 2e-25
Identities = 57/67 (85%), Positives = 61/67 (91%), Gaps = 1/67 (1%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RTLSDYNIQK 236
V TLTGKTITLEVE SDTI+NVKAKIQDKE I P+QQRLIFAG+QLEDG TL+DYNIQK
Sbjct: 235 VNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQK 294
Query: 237 ESTLHLV 257
ESTLHLV
Sbjct: 295 ESTLHLV 301
Score = 99.5 bits (237), Expect = 1e-21
Identities = 48/64 (75%), Positives = 56/64 (87%)
Frame = +3
Query: 63 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKES 242
KTLT KTIT++V SDTI NVKAKIQD EGIP +QQRLIF+GK L+DGRTL+DY+IQK+S
Sbjct: 8 KTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDS 67
Query: 243 TLHL 254
LHL
Sbjct: 68 ILHL 71
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 122 bits (293), Expect = 2e-28
Identities = 59/66 (89%), Positives = 63/66 (95%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
V+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYNIQKE
Sbjct: 83 VQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKE 142
Query: 240 STLHLV 257
STLHLV
Sbjct: 143 STLHLV 148
Score = 112 bits (269), Expect = 2e-25
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = +3
Query: 63 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKES 242
KTLT KTITL+VE SD+I NVKAKIQ+KEGIP +QQRLIFAGKQLEDG TL+DYNIQKES
Sbjct: 8 KTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKES 67
Query: 243 TLHLV 257
TLHLV
Sbjct: 68 TLHLV 72
Score = 98.7 bits (235), Expect = 2e-21
Identities = 49/66 (74%), Positives = 55/66 (83%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
+KTLTGKTI LEVE SDTI NVK KIQ KEGI P+QQ LIF G+QLEDG TL DY+I K+
Sbjct: 556 IKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKK 615
Query: 240 STLHLV 257
STL+LV
Sbjct: 616 STLYLV 621
Score = 98.3 bits (234), Expect = 3e-21
Identities = 51/68 (75%), Positives = 56/68 (82%), Gaps = 2/68 (2%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP--NQQRLIFAGKQLEDGRTLSDYNIQ 233
VKTLT K I LEVE DTIENVKA +QDKEGI P N QRLIF GK+L+DG TL+DY+IQ
Sbjct: 323 VKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQ 382
Query: 234 KESTLHLV 257
KESTLHLV
Sbjct: 383 KESTLHLV 390
Score = 93.9 bits (223), Expect = 7e-20
Identities = 46/65 (70%), Positives = 52/65 (80%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
VK GK ITLEV SDTI++VKAKIQDK G PP+QQ L+F G QL+DGRTL DYNI+ E
Sbjct: 397 VKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNE 456
Query: 240 STLHL 254
STLHL
Sbjct: 457 STLHL 461
Score = 89.4 bits (212), Expect = 1e-18
Identities = 44/64 (68%), Positives = 51/64 (79%)
Frame = +3
Query: 66 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKEST 245
+ TG+ LEVE SDTI+NVKAK+QDKE IP + RLIFAGK LE GRTL+ YNIQK ST
Sbjct: 249 SFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGST 308
Query: 246 LHLV 257
L+LV
Sbjct: 309 LYLV 312
Score = 88.2 bits (209), Expect = 3e-18
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = +3
Query: 54 FSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 233
FS +T T KTITLEVE SDTI+NVK KIQ K GIP ++QRLIF G+ L RTL DYNIQ
Sbjct: 478 FSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQ 537
Query: 234 KESTLH 251
K ST+H
Sbjct: 538 KGSTIH 543
Score = 86.6 bits (205), Expect = 1e-17
Identities = 44/69 (63%), Positives = 53/69 (76%), Gaps = 2/69 (2%)
Frame = +3
Query: 54 FSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL--EDGRTLSDYN 227
FS K T T+TL+VE SDTIENVKAKIQD+EG+ P+ QRLIF G++L ED RTL+DY
Sbjct: 162 FSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYG 221
Query: 228 IQKESTLHL 254
I+ STL L
Sbjct: 222 IRNRSTLCL 230
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 106 bits (254), Expect = 1e-23
Identities = 49/66 (74%), Positives = 57/66 (86%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP +QQRLIF GKQLEDG TL+DYNIQ +
Sbjct: 90 IKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQND 149
Query: 240 STLHLV 257
S LHL+
Sbjct: 150 SILHLI 155
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 82.2 bits (194), Expect = 2e-16
Identities = 36/69 (52%), Positives = 50/69 (72%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 230
+ VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN+
Sbjct: 2 EIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNL 61
Query: 231 QKESTLHLV 257
++ S LHLV
Sbjct: 62 ERGSVLHLV 70
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 64.5 bits (150), Expect = 5e-11
Identities = 28/69 (40%), Positives = 45/69 (65%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 230
+ ++KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y++
Sbjct: 25 ELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHL 84
Query: 231 QKESTLHLV 257
+ TLHL+
Sbjct: 85 ENGHTLHLI 93
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 60.5 bits (140), Expect = 8e-10
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 191
+KTLTG+T T EV+ SDTI +KAK ++KEGIP QQRLIF G+
Sbjct: 54 IKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 57.2 bits (132), Expect = 7e-09
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
V T+ KT LEV+ SDTI+ +K+ I D+ G P +QQ L G +L++ T+SDYNI+ +
Sbjct: 145 VSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYNIKPD 204
Query: 240 STL 248
+ L
Sbjct: 205 ANL 207
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEV-EPSDTIE 119
+ S+KT+ GK+I LEV + SDTI+
Sbjct: 97 RISIKTVKGKSINLEVADSSDTID 120
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 57 SVKTLTGKTITLEVEPSDTIENVK 128
S+KTL GK I LEVE S ++K
Sbjct: 4 SIKTLEGKRIKLEVEDSSNTIDLK 27
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 54.8 bits (126), Expect = 4e-08
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +3
Query: 75 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 254
GKTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y+I+++++L L
Sbjct: 105 GKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIEQDASLQL 164
Query: 255 V 257
V
Sbjct: 165 V 165
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/67 (31%), Positives = 39/67 (58%)
Frame = +3
Query: 57 SVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 236
+++ G +++ T+E+ K + +P NQQRLI+ G+ L+D +TL Y +Q
Sbjct: 21 NIRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQA 80
Query: 237 ESTLHLV 257
+ T+H+V
Sbjct: 81 DHTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +3
Query: 57 SVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQK 236
+V+ G ++ T+E+ K I +P NQQRLI+ G+ L+D +TL Y +Q
Sbjct: 21 NVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQA 80
Query: 237 ESTLHLV 257
+ T+H+V
Sbjct: 81 DHTVHMV 87
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDY 224
K VKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 2 KIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEEN 61
Query: 225 NIQKES 242
N+ + S
Sbjct: 62 NVVENS 67
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 221
K +VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 222 YNIQKESTL 248
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 221
K +VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 222 YNIQKESTL 248
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 221
K +VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L +
Sbjct: 2 KLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVE 61
Query: 222 YNIQKESTL 248
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 48.4 bits (110), Expect = 3e-06
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPNQQRLIFAGKQLEDGRTLSD 221
K +VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL +
Sbjct: 2 KLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLVE 61
Query: 222 YNIQKESTL 248
+ +E L
Sbjct: 62 NKVTEEGFL 70
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 47.2 bits (107), Expect = 8e-06
Identities = 22/68 (32%), Positives = 40/68 (58%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 230
K +V+ +G T ++++ DT+ K KI+ + IP ++Q + F GK LED + +++I
Sbjct: 2 KMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDI 61
Query: 231 QKESTLHL 254
+ LHL
Sbjct: 62 LQNPLLHL 69
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYN 227
+ +K L T TL VE + + ++K I G+ P +Q RL+F G+ L++ + LSDY+
Sbjct: 12 RIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYH 71
Query: 228 IQKESTLHLV 257
+++ TL+LV
Sbjct: 72 VEEGHTLYLV 81
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/69 (28%), Positives = 42/69 (60%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 230
+ +V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS +
Sbjct: 2 RITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALGV 61
Query: 231 QKESTLHLV 257
+ + L ++
Sbjct: 62 KDDDLLMMM 70
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
+ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I E
Sbjct: 5 IDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFE 64
Query: 240 STLHL 254
S L L
Sbjct: 65 SRLLL 69
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
+ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY I E
Sbjct: 5 IDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFE 64
Query: 240 STL 248
S L
Sbjct: 65 SLL 67
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 221
K VKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+ +
Sbjct: 2 KIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEE 61
Query: 222 YNIQKES 242
+ + S
Sbjct: 62 NKVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 221
K VKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+ +
Sbjct: 2 KIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIEE 61
Query: 222 YNIQKES 242
+ + S
Sbjct: 62 NKVAENS 68
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 233
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 234 KESTLHLV 257
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 233
VKT GK VE I VK +I K G + P++Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 234 KESTLHLV 257
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 230
K +VK GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++
Sbjct: 537 KLTVK-FGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDV 595
Query: 231 QKESTLHLV 257
+ L L+
Sbjct: 596 GSGAKLMLM 604
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYN 227
K + L GK L V +++ ++KAK K + ++ + GK+LED ++L++ N
Sbjct: 501 KIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQN 560
Query: 228 IQKESTLHLV 257
+Q S +HL+
Sbjct: 561 VQPNSLVHLL 570
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDYN 227
K VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+ N
Sbjct: 662 KIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQN 721
Query: 228 IQKESTLHLV 257
+Q S +HL+
Sbjct: 722 VQPNSLVHLI 731
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 227
+F V+ L GK++TL P E +K +I ++ IP + QRLI G Q+ DG +S
Sbjct: 10 QFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS--- 66
Query: 228 IQKESTLHLV 257
Q ++T++LV
Sbjct: 67 -QPDATVNLV 75
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 40.3 bits (90), Expect = 9e-04
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +3
Query: 57 SVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPNQQRLIFAGKQLEDGRTLSDYN 227
SV+T+ GK L VE S + VK +I KE GIP + + L G++L+D R ++D
Sbjct: 112 SVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDLC 170
Query: 228 IQKESTLHLV 257
++ +HL+
Sbjct: 171 QNGDNVIHLL 180
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 188
KF V+ L G + +EVE +DT+ VK KI+ + +P ++Q LI G
Sbjct: 2 KFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 63 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKES 242
+T +G T +E+ DT+ +K KI+ + IP ++Q L+F G L+D + I S
Sbjct: 6 ETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCVILNHS 65
Query: 243 TLHL 254
+ L
Sbjct: 66 RIQL 69
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 230
K ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + I
Sbjct: 3 KVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQI 62
Query: 231 QKESTLHL 254
+ S + L
Sbjct: 63 RHNSRILL 70
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLSD 221
K VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 2 KIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTMEA 61
Query: 222 YNIQKESTLHLV 257
+ +S + ++
Sbjct: 62 NKVFDKSVIAII 73
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +3
Query: 51 KFSVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 188
KF V+ L G + LEV+ DT+ VK KI+ + IP ++Q LI G
Sbjct: 2 KFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 239
++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + I+
Sbjct: 40 IENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHN 99
Query: 240 STLHL 254
S + L
Sbjct: 100 SRILL 104
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 35.1 bits (77), Expect = 0.034
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +3
Query: 45 RCKFSVKT--LTGKTITLEVEPSDTIENVKAKIQDKEGIP 158
R +F VK+ L+ K I +E++P D IE +K I+++ GIP
Sbjct: 40 RQRFKVKSQFLSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.7 bits (76), Expect = 0.045
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 90 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 203
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 33.5 bits (73), Expect = 0.10
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 63 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 203
+T +G +E+ DT+ +K KI+ + IP ++Q LIF G L+D
Sbjct: 6 ETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 33.1 bits (72), Expect = 0.14
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 161
V TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 53 VSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 60 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 203
V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 31.5 bits (68), Expect = 0.42
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +3
Query: 90 LEVEPSD-TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG----RTLSDYNIQKESTL 248
LEVE + T+ ++ ++ + G+ P +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 57 SVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-NQQRLIFAGKQLEDGRTLSDYNI 230
+V T GK V+ + +K +I ++ +G P + Q ++F G++L+D R +
Sbjct: 114 TVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGICK 173
Query: 231 QKESTLHLV 257
S +HL+
Sbjct: 174 DGNSVIHLL 182
>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to Chain A,
Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
Replaced By Phe (Y24f) gi|999542
Length = 363
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -3
Query: 257 HQVEGGF--LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 138
H V+G LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 272 HAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Frame = +3
Query: 105 SDTIENVKAKI-----QDKEGIPP--NQQRLIFAGKQLEDGRTLSD 221
S T+ ++K K+ +DKE P N +LI AGK LE+ RTL++
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 105 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 230
S+ + ++K KI + IP N+Q+L L+D +L+ YN+
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +3
Query: 78 KTITLEVEP-SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 230
K + + V+ S+ + ++K KI + P N+Q+L L+D +L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 363
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -3
Query: 236 LLDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 138
LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIIYGL 313
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 99 EPSDTIENVKAKIQDKEG-IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 254
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At5g11830.1 68418.m01382 hypothetical protein
Length = 174
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -1
Query: 124 TFSMVSDGSTSRVMVLPVRVFTENLHLHSPYAV 26
T +M+ DG T + + P ++ L+SPYA+
Sbjct: 106 TTAMLCDGQTCKYAIRPNGIYFIGYELYSPYAI 138
>At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 368
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 233 LDIVVREGTSIFQLLSSKDQPLLIGRDSLFVL 138
LD VR GT +F+ L+ + +GR SLF L
Sbjct: 284 LDGGVRRGTDVFKALALGASGVFVGRPSLFSL 315
>At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) family
protein contains Pfam profile: PF00579 tRNA synthetases
class I (W and Y)
Length = 412
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 530 LEGTYLFVVVFEDHRAMTLPAVVTVLHHRHEHSGAALLACAL 405
L+ TY + + DH A+TLP L + A LAC +
Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLACGI 133
>At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) family
protein contains Pfam profile: PF00579 tRNA synthetases
class I (W and Y)
Length = 408
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 530 LEGTYLFVVVFEDHRAMTLPAVVTVLHHRHEHSGAALLACAL 405
L+ TY + + DH A+TLP L + A LAC +
Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLACGI 133
>At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial, putative / succinyl-CoA
synthetase, beta chain, putative / SCS-beta, putative
identical to SP|O82662 Succinyl-CoA ligase [GDP-forming]
beta-chain, mitochondrial precursor (EC 6.2.1.4)
(Succinyl-CoA synthetase, beta chain) (SCS- beta)
{Arabidopsis thaliana}; similar to SP|O97580
Succinyl-CoA ligase [ADP-forming] beta-chain,
mitochondrial precursor (EC 6.2.1.5) {Sus scrofa};
contains Pfam profiles PF00549: CoA-ligase, PF02222:
ATP-grasp domain
Length = 421
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 105 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 257
+ ++E VK IQD + PN+ L+ + L GR L + + +H+V
Sbjct: 51 ASSLEEVKKAIQD---VFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIV 98
>At1g78020.1 68414.m09092 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana]
Length = 162
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 145 KRESLPINRG*SLLESSWKMDVPSRTTISRRNPPS 249
KR+ PINR SL E + +++PS + S + P+
Sbjct: 5 KRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPT 39
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,042,498
Number of Sequences: 28952
Number of extensions: 232448
Number of successful extensions: 791
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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