Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_K14
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 151 3e-37
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 149 1e-36
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 147 6e-36
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 60 1e-09
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 60 2e-09
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 55 3e-09
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 58 5e-09
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 58 5e-09
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 58 5e-09
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 58 5e-09
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 56 3e-08
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 56 3e-08
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 55 5e-08
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 53 1e-07
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 53 1e-07
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 53 2e-07
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 52 3e-07
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 52 3e-07
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 52 3e-07
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 52 3e-07
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 51 6e-07
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 51 6e-07
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 51 6e-07
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 51 6e-07
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 51 6e-07
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 51 6e-07
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 51 8e-07
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 50 2e-06
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 50 2e-06
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 50 2e-06
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 49 2e-06
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 48 5e-06
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 47 1e-05
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 47 1e-05
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 47 1e-05
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 46 2e-05
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 46 2e-05
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 46 2e-05
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 45 4e-05
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 45 4e-05
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 45 4e-05
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 45 4e-05
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 45 4e-05
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 45 5e-05
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 45 5e-05
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 44 7e-05
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 44 9e-05
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 44 9e-05
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 44 9e-05
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 44 1e-04
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 44 1e-04
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 44 1e-04
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 44 1e-04
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 43 2e-04
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 42 3e-04
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 42 5e-04
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 42 5e-04
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 41 6e-04
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 41 8e-04
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 41 8e-04
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 39 0.001
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 40 0.001
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 40 0.001
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 40 0.001
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 40 0.001
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 40 0.002
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 39 0.003
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 39 0.003
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 39 0.003
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 39 0.003
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 39 0.003
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 39 0.003
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 39 0.003
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 39 0.003
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 39 0.003
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 39 0.003
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 39 0.003
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 39 0.003
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 39 0.003
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 38 0.004
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 38 0.004
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 38 0.004
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 38 0.004
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 38 0.006
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 38 0.006
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 38 0.006
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 38 0.006
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 38 0.008
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 38 0.008
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 38 0.008
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 38 0.008
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 38 0.008
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 38 0.008
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 38 0.008
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 37 0.010
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 37 0.010
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 37 0.010
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 37 0.010
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 37 0.010
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 37 0.010
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 37 0.010
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 37 0.010
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 37 0.013
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 37 0.013
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 36 0.018
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 36 0.018
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 36 0.018
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 36 0.024
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 36 0.024
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 36 0.031
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 36 0.031
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 35 0.041
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 35 0.041
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 35 0.041
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 35 0.054
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 35 0.054
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 35 0.054
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 34 0.072
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 34 0.072
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.072
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.072
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 34 0.072
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 34 0.095
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 34 0.095
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 33 0.13
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 33 0.13
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 33 0.17
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.17
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.17
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 33 0.22
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 33 0.22
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 33 0.22
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 33 0.22
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 33 0.22
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 33 0.22
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 33 0.22
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 32 0.29
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 32 0.29
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 32 0.29
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 32 0.29
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 32 0.29
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 32 0.29
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 32 0.38
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 32 0.38
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 32 0.38
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 32 0.38
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 32 0.38
At5g62620.1 68418.m07859 galactosyltransferase family protein co... 31 0.51
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 31 0.51
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 31 0.51
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 31 0.51
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 31 0.51
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 31 0.51
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 31 0.51
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 31 0.51
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 31 0.67
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 31 0.67
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 31 0.67
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 31 0.67
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 31 0.67
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 31 0.67
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 31 0.67
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 31 0.67
At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A... 31 0.67
At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A... 31 0.67
At1g17630.1 68414.m02181 pentatricopeptide (PPR) repeat-containi... 31 0.67
At5g55740.1 68418.m06948 pentatricopeptide (PPR) repeat-containi... 31 0.88
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 31 0.88
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 31 0.88
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 31 0.88
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 31 0.88
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 31 0.88
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 31 0.88
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 30 1.2
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 30 1.2
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 30 1.2
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 1.2
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 30 1.5
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 30 1.5
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 30 1.5
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 29 2.0
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 29 2.0
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 29 2.0
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 29 2.0
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 29 2.0
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 29 2.0
At5g09760.1 68418.m01130 pectinesterase family protein contains ... 29 2.7
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 29 2.7
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 29 3.6
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 29 3.6
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 28 4.7
At4g38010.1 68417.m05370 pentatricopeptide (PPR) repeat-containi... 28 4.7
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 28 4.7
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 28 4.7
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 28 4.7
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 28 4.7
At1g16480.1 68414.m01971 pentatricopeptide (PPR) repeat-containi... 28 4.7
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 28 6.2
At5g12430.1 68418.m01461 DNAJ heat shock N-terminal domain-conta... 28 6.2
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 28 6.2
At4g04710.1 68417.m00692 calcium-dependent protein kinase, putat... 28 6.2
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 28 6.2
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 28 6.2
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 27 8.2
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 27 8.2
At4g03970.1 68417.m00561 Ulp1 protease family protein contains P... 27 8.2
At2g18810.1 68415.m02189 hypothetical protein contains Pfam prof... 27 8.2
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 27 8.2
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 27 8.2
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 27 8.2
At1g27120.1 68414.m03305 galactosyltransferase family protein co... 27 8.2
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 151 bits (367), Expect = 3e-37
Identities = 70/108 (64%), Positives = 85/108 (78%)
Frame = +1
Query: 76 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 255
E L L+GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL GH
Sbjct: 3 EGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGH 62
Query: 256 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
SHF+ DVVLSSDG +ALSGSWD LRLWDLAAG +TRRF HTKDVLS
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLS 110
Score = 93.9 bits (223), Expect = 8e-20
Identities = 40/62 (64%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = +3
Query: 474 LAECKYTIQD--DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHS 647
L ECKYTI + +GH DWVSCVRFSPN P IVS WD TVKVW+L+NCKL+ GH+
Sbjct: 135 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHT 194
Query: 648 GY 653
GY
Sbjct: 195 GY 196
Score = 58.4 bits (135), Expect = 4e-09
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +1
Query: 55 NHFQKCLETLKLRGTLRGHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGI 231
N +C T+ G GH WV+ + +P I+S+S DKT+ VW L+ +
Sbjct: 133 NTLGECKYTISEGG--EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL---- 186
Query: 232 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 357
+ L GH+ ++S V +S DG+ SG D + LWDLA GK
Sbjct: 187 -RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 227
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +2
Query: 401 VAFSVDNRQIVSGSRDKTIXLWNTLG 478
VAFS+DNRQIVS SRD+TI LWNTLG
Sbjct: 111 VAFSLDNRQIVSASRDRTIKLWNTLG 136
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 333
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGG-EGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 177
Query: 334 LWDLAAGKTTRRFEDHT 384
+W+L+ K HT
Sbjct: 178 VWNLSNCKLRSTLAGHT 194
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L GH+ +V + + LS S D L +W L G+ +R GH+ + V
Sbjct: 59 LTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLAA-----GVSTRRFVGHTKDVLSVA 112
Query: 280 LSSDGNYALSGSWDKTLRLWD 342
S D +S S D+T++LW+
Sbjct: 113 FSLDNRQIVSASRDRTIKLWN 133
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 389 MYSRVAFSVDNRQI-VSGSRDKTIXLW 466
M + +A +DN I VS SRDK+I LW
Sbjct: 17 MVTAIATPIDNADIIVSASRDKSIILW 43
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWH-LTNCKLKINHLG 641
GH+ V V FS + N IVS D T+K+W+ L CK I+ G
Sbjct: 103 GHTKDVLSVAFSLD--NRQIVSASRDRTIKLWNTLGECKYTISEGG 146
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3
Query: 474 LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCK 620
L+ CK GH+ +VS V SP+ + S G D V +W L K
Sbjct: 181 LSNCKLRSTLAGHTGYVSTVAVSPD--GSLCASGGKDGVVLLWDLAEGK 227
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 149 bits (362), Expect = 1e-36
Identities = 68/108 (62%), Positives = 85/108 (78%)
Frame = +1
Query: 76 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 255
E L L+G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL GH
Sbjct: 3 EGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGH 62
Query: 256 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
SHF+ DVVLSSDG +ALSGSWD LRLWDLA G+TTRRF HTKDVLS
Sbjct: 63 SHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLS 110
Score = 95.1 bits (226), Expect = 4e-20
Identities = 41/61 (67%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +3
Query: 474 LAECKYTIQD-DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSG 650
L ECKYTI + DGH +WVSCVRFSPN P IVS WD TVKVW+L NCKL+ + +GHSG
Sbjct: 135 LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSG 194
Query: 651 Y 653
Y
Sbjct: 195 Y 195
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 106 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 282
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNSLVGHSGYLNTVAV 201
Query: 283 SSDGNYALSGSWDKTLRLWDLAAGK 357
S DG+ SG D + LWDLA GK
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGK 226
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +2
Query: 401 VAFSVDNRQIVSGSRDKTIXLWNTLG 478
VAFS DNRQIVS SRD+TI LWNTLG
Sbjct: 111 VAFSTDNRQIVSASRDRTIKLWNTLG 136
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/91 (26%), Positives = 45/91 (49%)
Frame = +1
Query: 73 LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 252
L+ KLR +L GH+G++ +A +P + S +D +++W L + Y + +
Sbjct: 180 LQNCKLRNSLVGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSLEAGSII- 237
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
HS + S Y L + + ++R+WDL
Sbjct: 238 HS------LCFSPNRYWLCAATENSIRIWDL 262
Score = 40.7 bits (91), Expect = 8e-04
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 333
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 334 LWDLAAGKTTRRFEDHT 384
+W+L K H+
Sbjct: 177 VWNLQNCKLRNSLVGHS 193
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L GH+ +V + + LS S D L +W L E +R GH+ + V
Sbjct: 59 LTGHSHFVEDVVLSSD-GQFALSGSWDGELRLWDLATGETT-----RRFVGHTKDVLSVA 112
Query: 280 LSSDGNYALSGSWDKTLRLWD 342
S+D +S S D+T++LW+
Sbjct: 113 FSTDNRQIVSASRDRTIKLWN 133
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWH-LTNCKLKIN 632
GH+ V V FS + N IVS D T+K+W+ L CK I+
Sbjct: 103 GHTKDVLSVAFSTD--NRQIVSASRDRTIKLWNTLGECKYTIS 143
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 147 bits (356), Expect = 6e-36
Identities = 66/108 (61%), Positives = 85/108 (78%)
Frame = +1
Query: 76 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 255
E L L+GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+ GH
Sbjct: 3 EGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGH 62
Query: 256 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
SHF+ DVVLSSDG +ALSGSWD LRLWDLA G++TRRF HTKDVLS
Sbjct: 63 SHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLS 110
Score = 93.9 bits (223), Expect = 8e-20
Identities = 41/61 (67%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Frame = +3
Query: 474 LAECKYTIQD-DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSG 650
L ECKYTI + DGH +WVSCVRFSPN P IVS WD TVKVW+L NCKL+ GHSG
Sbjct: 135 LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSG 194
Query: 651 Y 653
Y
Sbjct: 195 Y 195
Score = 56.0 bits (129), Expect = 2e-08
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 106 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 282
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNTLAGHSGYLNTVAV 201
Query: 283 SSDGNYALSGSWDKTLRLWDLAAGK 357
S DG+ SG D + LWDLA GK
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGK 226
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +2
Query: 401 VAFSVDNRQIVSGSRDKTIXLWNTLG 478
VAFS DNRQIVS SRD+TI LWNTLG
Sbjct: 111 VAFSTDNRQIVSASRDRTIKLWNTLG 136
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/91 (27%), Positives = 45/91 (49%)
Frame = +1
Query: 73 LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 252
L+ KLR TL GH+G++ +A +P + S +D +++W L + Y + +
Sbjct: 180 LQNCKLRNTLAGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSLEAGSII- 237
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
HS + S Y L + + ++R+WDL
Sbjct: 238 HS------LCFSPNRYWLCAATENSIRIWDL 262
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 333
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEAD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 334 LWDLAAGKTTRRFEDHT 384
+W+L K H+
Sbjct: 177 VWNLQNCKLRNTLAGHS 193
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/81 (28%), Positives = 39/81 (48%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
+ GH+ +V + + LS S D L +W L E+ +R GH+ + V
Sbjct: 59 MTGHSHFVQDVVLSSD-GQFALSGSWDGELRLWDLATGEST-----RRFVGHTKDVLSVA 112
Query: 280 LSSDGNYALSGSWDKTLRLWD 342
S+D +S S D+T++LW+
Sbjct: 113 FSTDNRQIVSASRDRTIKLWN 133
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWH-LTNCKLKINHL-GH 644
GH+ V V FS + N IVS D T+K+W+ L CK I+ GH
Sbjct: 103 GHTKDVLSVAFSTD--NRQIVSASRDRTIKLWNTLGECKYTISEADGH 148
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 389 MYSRVAFSVDNRQ-IVSGSRDKTIXLW 466
M + +A VDN IV+ SRDK+I LW
Sbjct: 17 MVTAIATPVDNSDVIVTSSRDKSIILW 43
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 60.1 bits (139), Expect = 1e-09
Identities = 34/100 (34%), Positives = 54/100 (54%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L GH V + NP +I S S D+ + +W++ D N+ + L GH + I D+
Sbjct: 49 LSGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMV----LKGHKNAILDLH 103
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
+SDG+ +S S DKT+R WD+ GK ++ +H+ V S
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNS 143
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/114 (26%), Positives = 51/114 (44%)
Frame = +1
Query: 73 LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 252
+ET K + H+ +V + P +I+S S D T +W + + P K
Sbjct: 125 VETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDK---- 180
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS 414
+ I+ V S + +G D +++WDL G+ T E H +D ++G LS
Sbjct: 181 --YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGH-QDTITGMSLS 231
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
TL GH +T ++ +P +L++ D L VW + R K GH H
Sbjct: 217 TLEGHQDTITGMSLSPD-GSYLLTNGMDNKLCVWDM-RPYAPQNRCVKIFEGHQHNFEKN 274
Query: 277 VL----SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
+L S DG +GS D+ + +WD + +T + HT V
Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSV 317
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 154 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 333
D I + D + VW L + E L GH I+ + LS DG+Y L+ D L
Sbjct: 193 DKIFTGGVDNDVKVWDLRKGEATM-----TLEGHQDTITGMSLSPDGSYLLTNGMDNKLC 247
Query: 334 LWDL 345
+WD+
Sbjct: 248 VWDM 251
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 416 DNRQIVSGSRDKTIXLWNTLGGVQV 490
D QIVS S DKT+ W+ G Q+
Sbjct: 107 DGSQIVSASPDKTVRAWDVETGKQI 131
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/96 (33%), Positives = 49/96 (51%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
TL HN V+ + + ++ S+S DKT+ + + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 277 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 384
SSD + +S S DKTL+LWD+ G + HT
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHT 113
Score = 52.0 bits (119), Expect = 3e-07
Identities = 30/96 (31%), Positives = 50/96 (52%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 285
GH ++ +A + I+S+S DKTL +W + G K L GH+++ V +
Sbjct: 69 GHENGISDVAFSSD-ARFIVSASDDKTLKLWDVET-----GSLIKTLIGHTNYAFCVNFN 122
Query: 286 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
N +SGS+D+T+R+WD+ GK + H+ V
Sbjct: 123 PQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPV 158
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/101 (27%), Positives = 47/101 (46%)
Frame = +1
Query: 79 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 258
T K L H+ VT + N + +I+SSS D +W D + + +
Sbjct: 144 TGKCLKVLPAHSDPVTAVDFN-RDGSLIVSSSYDGLCRIW----DSGTGHCVKTLIDDEN 198
Query: 259 HFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
+S V S +G + L G+ D TLRLW++++ K + + H
Sbjct: 199 PPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH 239
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 339
I+S S D + +W+L N+ + QK L GH+ + +V N SGS DKT+R+W
Sbjct: 258 IVSGSEDNCVHMWEL----NSKKLLQK-LEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 35.5 bits (78), Expect = 0.031
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCK-LKI 629
GH+++ CV F+P + +IVS +D TV++W +T K LK+
Sbjct: 111 GHTNYAFCVNFNPQ--SNMIVSGSFDETVRIWDVTTGKCLKV 150
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH---SHFISDVVLSSDGNYALSGSWDKTL 330
IL + D TL +W ++ + K GH + IS ++G +SGS D +
Sbjct: 213 ILVGTLDNTLRLWNISSAKF-----LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCV 267
Query: 331 RLWDLAAGKTTRRFEDHTKDVLS 399
+W+L + K ++ E HT+ V++
Sbjct: 268 HMWELNSKKLLQKLEGHTETVMN 290
Score = 35.1 bits (77), Expect = 0.041
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 450 RLSXSGTPLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKI 629
R+ SGT C T+ DD + VS VRFSPN I+ D T+++W++++ K
Sbjct: 180 RIWDSGT--GHCVKTLIDDENPP-VSFVRFSPN--GKFILVGTLDNTLRLWNISSAKFLK 234
Query: 630 NHLGH 644
+ GH
Sbjct: 235 TYTGH 239
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +2
Query: 395 SRVAFSVDNRQIVSGSRDKTIXLWNTLGG 481
S VAFS D R IVS S DKT+ LW+ G
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWDVETG 103
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 229 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
+ + L H+ +S V SSDG S S DKT+R + +
Sbjct: 15 VHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTI 53
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSGY 653
GH + +S V FS + IVS D T+K+W + L +GH+ Y
Sbjct: 69 GHENGISDVAFSSDAR--FIVSASDDKTLKLWDVETGSLIKTLIGHTNY 115
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 401 VAFSVDNRQIVSGSRDKTIXLWNTLGG 481
V F+ + IVSGS D+T+ +W+ G
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDVTTG 145
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 55.2 bits (127), Expect(2) = 3e-09
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +1
Query: 151 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 330
P+ ++S S D T+ +W+ + + P+KRL GH ++ V S DG + S S+DK++
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFSPDGKWIASASFDKSV 384
Query: 331 RLWDLAAGKTTRRFEDHTKDV 393
RLW+ G+ F H V
Sbjct: 385 RLWNGITGQFVTVFRGHVGPV 405
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/79 (32%), Positives = 42/79 (53%)
Frame = +1
Query: 103 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 282
RGH G V Q++ + ++LS S+D TL +W++ + +P GH+ + V
Sbjct: 399 RGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDLP-----GHADEVFAVDW 452
Query: 283 SSDGNYALSGSWDKTLRLW 339
S DG +SG D+ L+LW
Sbjct: 453 SPDGEKVVSGGKDRVLKLW 471
Score = 37.1 bits (82), Expect = 0.010
Identities = 28/100 (28%), Positives = 43/100 (43%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L GH V + +P I S+S DK++ +W G GH + V
Sbjct: 356 LTGHQQLVNHVYFSPD-GKWIASASFDKSVRLWN-----GITGQFVTVFRGHVGPVYQVS 409
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
S+D LSGS D TL++W++ K + H +V +
Sbjct: 410 WSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFA 449
Score = 36.7 bits (81), Expect = 0.013
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
T +GH WV +A +P ++ S S+ + W + E G P L GH +I+ +
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLV-SGSKSGEICCWNPKKGELE-GSP---LTGHKKWITGI 200
Query: 277 V-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 384
LSS ++ S D R+WD+ K+ HT
Sbjct: 201 SWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHT 241
Score = 35.5 bits (78), Expect = 0.031
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
GH+ + V S DG SGS D T+RLWDL
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL 138
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 471 PLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHL 608
P+ C TI GH++ V CV FSP+ + S D TV++W L
Sbjct: 97 PVNRCSQTIA--GHAEAVLCVSFSPDGKQ--LASGSGDTTVRLWDL 138
Score = 32.3 bits (70), Expect = 0.29
Identities = 23/87 (26%), Positives = 39/87 (44%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
T+ GH V ++ +P + S S D T+ +W L + P GH +++ V
Sbjct: 104 TIAGHAEAVLCVSFSPD-GKQLASGSGDTTVRLWDLYTET-----PLFTCKGHKNWVLTV 157
Query: 277 VLSSDGNYALSGSWDKTLRLWDLAAGK 357
S DG + +SGS + W+ G+
Sbjct: 158 AWSPDGKHLVSGSKSGEICCWNPKKGE 184
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 401 VAFSVDNRQIVSGSRDKTIXLWN 469
V+FS D +Q+ SGS D T+ LW+
Sbjct: 115 VSFSPDGKQLASGSGDTTVRLWD 137
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 386 RMYSRVAFSVDNRQIVSGSRDKTIXLWNTLGG 481
++ + V FS D + I S S DK++ LWN + G
Sbjct: 361 QLVNHVYFSPDGKWIASASFDKSVRLWNGITG 392
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +2
Query: 398 RVAFSVDNRQIVSGSRDKTIXLW 466
+V++S D+R ++SGS+D T+ +W
Sbjct: 407 QVSWSADSRLLLSGSKDSTLKIW 429
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL-SGSWDKTLR 333
+I + S+D T+ +W+ T+ G + L GH H+I+ + LS++ Y L +G++D T R
Sbjct: 254 IIYTGSQDCTIKMWETTQ-----GKLIRELKGHGHWINSLALSTE--YVLRTGAFDHTGR 306
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGH 644
GH+ V+CV++ + II + D T+K+W T KL GH
Sbjct: 239 GHTLAVTCVKWG---GDGIIYTGSQDCTIKMWETTQGKLIRELKGH 281
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 401 VAFSVDNRQIVSGSRDKTIXLWNTLGG 481
VA+S D + +VSGS+ I WN G
Sbjct: 157 VAWSPDGKHLVSGSKSGEICCWNPKKG 183
Score = 23.4 bits (48), Expect(2) = 3e-09
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 85 KLRGTLRGHNGWVTQIATNPKY 150
KL L+GH W+ +A + +Y
Sbjct: 273 KLIRELKGHGHWINSLALSTEY 294
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 58.0 bits (134), Expect = 5e-09
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +1
Query: 79 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 258
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 259 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDV 393
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDV 251
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/92 (27%), Positives = 42/92 (45%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 285
GH V ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 257
Query: 286 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
DG +GS D T RL+D+ G + ++ H
Sbjct: 258 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLT 611
GH +VSC ++ PN +I S G D T +W +T
Sbjct: 154 GHRGYVSCCQYVPNEDAHLITSSG-DQTCILWDVT 187
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 58.0 bits (134), Expect = 5e-09
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +1
Query: 79 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 258
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 142
Query: 259 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDV 393
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV
Sbjct: 143 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDV 189
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 279
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 286
Query: 280 LSSDGNYALSGSWDKTLRLW 339
LS+DG+ +GSWD L++W
Sbjct: 287 LSADGSALCTGSWDSNLKIW 306
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/92 (27%), Positives = 42/92 (45%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 285
GH V ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 195
Query: 286 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
DG +GS D T RL+D+ G + ++ H
Sbjct: 196 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 227
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLT 611
GH +VSC ++ PN +I S G D T +W +T
Sbjct: 92 GHRGYVSCCQYVPNEDAHLITSSG-DQTCILWDVT 125
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 58.0 bits (134), Expect = 5e-09
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +1
Query: 79 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 258
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 259 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDV 393
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDV 251
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 279
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 348
Query: 280 LSSDGNYALSGSWDKTLRLW 339
LS+DG+ +GSWD L++W
Sbjct: 349 LSADGSALCTGSWDSNLKIW 368
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/92 (27%), Positives = 42/92 (45%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 285
GH V ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 257
Query: 286 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
DG +GS D T RL+D+ G + ++ H
Sbjct: 258 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPH 289
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLT 611
GH +VSC ++ PN +I S G D T +W +T
Sbjct: 154 GHRGYVSCCQYVPNEDAHLITSSG-DQTCILWDVT 187
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 58.0 bits (134), Expect = 5e-09
Identities = 31/96 (32%), Positives = 53/96 (55%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L+ HNG + + +P + +SS DKT+ +W + + + + +K L GH ++ D V
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASS-DKTVKIWNV----DGFKL-EKVLTGHQRWVWDCV 260
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 387
S DG + ++ S D T RLW + AGK + ++ H K
Sbjct: 261 FSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHK 296
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGI--PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 330
M+++++ T VW+L R + P +L H+ I +LS Y + S DKT+
Sbjct: 176 MVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTV 235
Query: 331 RLWDLAAGKTTRRFEDHTK 387
++W++ K + H +
Sbjct: 236 KIWNVDGFKLEKVLTGHQR 254
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 375
H++ + V D + SGS D T+++WDL A + +E
Sbjct: 77 HTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYE 117
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 55.6 bits (128), Expect = 3e-08
Identities = 33/82 (40%), Positives = 47/82 (57%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
TL GH ++ + + +++ S+S DKT+I+W T NY + R GHS ISD+
Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISDL 91
Query: 277 VLSSDGNYALSGSWDKTLRLWD 342
SSD +Y S S D TLR+WD
Sbjct: 92 AWSSDSHYTCSASDDCTLRIWD 113
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/98 (29%), Positives = 51/98 (52%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 285
GH+ ++ +A + S+S D TL +W D + K L GH++F+ V +
Sbjct: 83 GHSSGISDLAWSSD-SHYTCSASDDCTLRIW----DARSPYECLKVLRGHTNFVFCVNFN 137
Query: 286 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
N +SGS+D+T+R+W++ GK R + H+ + S
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISS 175
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/100 (29%), Positives = 49/100 (49%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
LRGH +V + NP ++I+S S D+T+ +W++ G + + HS IS V
Sbjct: 124 LRGHTNFVFCVNFNPP-SNLIVSGSFDETIRIWEVKT-----GKCVRMIKAHSMPISSVH 177
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
+ DG+ +S S D + ++WD G + D +S
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVS 217
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = +1
Query: 238 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
K L GH+ IS V S+DGN S S DKT+ LW R+E H+ +
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGI 88
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 286 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGS 405
++G Y +SGS D + LWDL A +R E HT V+S S
Sbjct: 268 TNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVS 307
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHS 647
+GH+ +SCV+FS N N ++ S D T+ +W TN L + GHS
Sbjct: 40 EGHTAAISCVKFS-NDGN-LLASASVDKTMILWSATNYSLIHRYEGHS 85
Score = 33.9 bits (74), Expect = 0.095
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCK 620
GH+++V CV F+P + +IVS +D T+++W + K
Sbjct: 126 GHTNFVFCVNFNP--PSNLIVSGSFDETIRIWEVKTGK 161
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +2
Query: 353 ARLPDDSRTILRMYSRVAFSVD----NRQIVSGSRDKTIXLWNTLGG 481
AR P + +LR ++ F V+ + IVSGS D+TI +W G
Sbjct: 114 ARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTG 160
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +2
Query: 404 AFSVDN-RQIVSGSRDKTIXLWN 469
AFSV N + IVSGS D + LW+
Sbjct: 264 AFSVTNGKYIVSGSEDNCVYLWD 286
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 55.6 bits (128), Expect = 3e-08
Identities = 33/104 (31%), Positives = 54/104 (51%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L+ HN + + +P + +SS DKT+ +W L + + + +K L GH ++ D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASS-DKTVKIWNL----DGFKL-EKVLTGHERWVWDCD 266
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLL 411
S DG Y ++ S D T RLW + AGK ++ H K + +LL
Sbjct: 267 FSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVCCTLL 310
Score = 34.7 bits (76), Expect = 0.054
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 157 MILSSSRDKTLIVWK--LTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 330
M+++++ T VW+ R P +L H+ I +LS Y + S DKT+
Sbjct: 182 MVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTV 241
Query: 331 RLWDLAAGKTTRRFEDHTK 387
++W+L K + H +
Sbjct: 242 KIWNLDGFKLEKVLTGHER 260
Score = 31.1 bits (67), Expect = 0.67
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 220 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 372
N IP + H+ + V G+ SGS D ++++WDL + R F
Sbjct: 72 NPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREF 122
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 54.8 bits (126), Expect = 5e-08
Identities = 34/109 (31%), Positives = 50/109 (45%)
Frame = +1
Query: 73 LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 252
LE K+ GH + + +P + + + S S D L VW D G Q G
Sbjct: 36 LEESKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVW----DTRKKGCIQT-YKG 89
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
H+ IS + S DG + +SG D +++WDL AGK F+ H + S
Sbjct: 90 HTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRS 138
Score = 34.7 bits (76), Expect = 0.054
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSG 650
GH+ +S + FSP+ +VS G D VKVW LT KL H G
Sbjct: 89 GHTRGISTIEFSPD--GRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEG 134
Score = 33.9 bits (74), Expect = 0.095
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
L GH+ + V +S+ L+G+ ++LWDL K R F H
Sbjct: 3 LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGH 48
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 386 RMYSRVAFSVDNRQIVSGSRDKTIXLWNTLGG 481
R S + FS D R +VSG D + +W+ G
Sbjct: 92 RGISTIEFSPDGRWVVSGGLDNVVKVWDLTAG 123
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/99 (35%), Positives = 50/99 (50%)
Frame = +1
Query: 103 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 282
+GHN V +P + S S D+T +W + R + P + + GH +SDV
Sbjct: 457 KGHNYPVWDAQFSP-FGHYFASCSHDRTARIWSMDRIQ-----PLRIMAGH---LSDVDW 507
Query: 283 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
+ NY +GS DKT+RLWD+ G+ R F H VLS
Sbjct: 508 HPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLS 546
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/98 (32%), Positives = 47/98 (47%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L GH+G V +P D +LSSS D T+ +W + N + K GH++ + D
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNANL--VCYK---GHNYPVWDAQ 467
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
S G+Y S S D+T R+W + + R H DV
Sbjct: 468 FSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDV 505
Score = 41.1 bits (92), Expect = 6e-04
Identities = 27/100 (27%), Positives = 44/100 (44%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
LR G ++ + +P + I + S DKT+ +W + E + GH + +
Sbjct: 495 LRIMAGHLSDVDWHPNC-NYIATGSSDKTVRLWDVQTGEC-----VRIFIGHRSMVLSLA 548
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
+S DG Y SG D T+ +WDL+ + H V S
Sbjct: 549 MSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWS 588
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/91 (27%), Positives = 42/91 (46%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 285
GH V +A +P M S D T+++W L+ L GH+ + + S
Sbjct: 539 GHRSMVLSLAMSPDGRYMA-SGDEDGTIMMWDLSTARCI-----TPLMGHNSCVWSLSYS 592
Query: 286 SDGNYALSGSWDKTLRLWDLAAGKTTRRFED 378
+G+ SGS D T++LWD+ + + E+
Sbjct: 593 GEGSLLASGSADCTVKLWDVTSSTKLTKAEE 623
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/96 (30%), Positives = 47/96 (48%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 285
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ + L G + D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHLKGVN--CVDYFTG 196
Query: 286 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
D Y ++GS D T ++WD + E HT +V
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNV 232
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLK 626
+GH+ VS V F P PII++ D TV++WH T +L+
Sbjct: 226 EGHTHNVSAVSFHPEL--PIIITGSEDGTVRIWHATTYRLE 264
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHL 608
+GHS +V V F+P N S D T+K+W+L
Sbjct: 139 EGHSHYVMQVTFNPKDTN-TFASASLDRTIKIWNL 172
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 339
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/101 (28%), Positives = 47/101 (46%)
Frame = +1
Query: 70 CLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 249
C +L T GH V+ I PK ++LS+ D + +W D N G +
Sbjct: 268 CYIPKRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYM 323
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 372
GH+ + D+ S+DG+ L+ +DK ++ WD G+ F
Sbjct: 324 GHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTF 364
Score = 36.7 bits (81), Expect = 0.013
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNC-KLKINHLGHS 647
GH+ VS +RF P + +++S G D VK+W + N K ++GH+
Sbjct: 280 GHTKGVSAIRFFPKQGH-LLLSAGMDCKVKIWDVYNSGKCMRTYMGHA 326
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +1
Query: 109 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH--SHFISDVVL 282
H + I+ +P + + + S D ++++ TR+ +KR GH + + V
Sbjct: 454 HMHSMPSISVHPN-GNWLAAQSLDNQILIYS-TRERFQLN-KKKRFAGHIVAGYACQVNF 510
Query: 283 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
S DG + +SG + WD + K R + H
Sbjct: 511 SPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 543
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/98 (27%), Positives = 46/98 (46%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
++GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 172 IQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIEQVRGLA 225
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
+S+ Y S DK ++ WDL K R + H V
Sbjct: 226 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGV 263
Score = 48.4 bits (110), Expect = 4e-06
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = +1
Query: 67 KC--LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQK 240
KC LE K+ + GH V +A +P D++L+ RD VW + +
Sbjct: 243 KCWDLEQNKVIRSYHGHLSGVYCLALHPTL-DVLLTGGRDSVCRVWDIRTKMQIFA---- 297
Query: 241 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSL 408
L GH + + V ++GS D T++ WDL GKT H K V + +L
Sbjct: 298 -LSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTL 352
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGH 644
GH WV V F P+ N + D T+K+W + LK+ GH
Sbjct: 174 GHLGWVRSVAFDPS--NEWFCTGSADRTIKIWDVATGVLKLTLTGH 217
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 401 VAFSVDNRQIVSGSRDKTIXLWNTLGGV 484
VAF N +GS D+TI +W+ GV
Sbjct: 182 VAFDPSNEWFCTGSADRTIKIWDVATGV 209
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/109 (28%), Positives = 51/109 (46%)
Frame = +1
Query: 73 LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 252
+E K+ GH + + +P + + + S S D L +W + + G Q G
Sbjct: 87 VEEAKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDANLKIWDIRKK----GCIQT-YKG 140
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
HS IS + + DG + +SG D +++WDL AGK F+ H + S
Sbjct: 141 HSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRS 189
Score = 36.7 bits (81), Expect = 0.013
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSG 650
GHS +S +RF+P+ +VS G D VKVW LT KL H G
Sbjct: 140 GHSRGISTIRFTPD--GRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEG 185
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
L GH+ + V S L+G+ ++LWD+ K R F H
Sbjct: 54 LCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGH 99
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 386 RMYSRVAFSVDNRQIVSGSRDKTIXLWNTLGG 481
R S + F+ D R +VSG D + +W+ G
Sbjct: 143 RGISTIRFTPDGRWVVSGGLDNVVKVWDLTAG 174
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 279
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
D Y ++GS D T ++WD + E HT +V
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNV 232
Score = 35.1 bits (77), Expect = 0.041
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLK 626
+GH+ VS V F P PII++ D TV++WH T +L+
Sbjct: 226 EGHTHNVSAVCFHPEL--PIIITGSEDGTVRIWHATTYRLE 264
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHL 608
+GHS +V V F+P N S D T+K+W+L
Sbjct: 139 EGHSHYVMQVTFNPKDTN-TFASASLDRTIKIWNL 172
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVL 396
HS +I V + Y LS S D ++LWD G T+ FE H+ V+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVM 146
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 339
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVW 602
+ HSD++ CV P P ++S D +K+W
Sbjct: 96 EAHSDYIRCVAVHP--TLPYVLSSSDDMLIKLW 126
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVW 602
D H V+CV + P +++ D T KVW
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/98 (28%), Positives = 46/98 (46%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L+GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 166 LQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIGQVRGLA 219
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
+S+ Y S DK ++ WDL K R + H V
Sbjct: 220 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGV 257
Score = 45.2 bits (102), Expect = 4e-05
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Frame = +1
Query: 67 KC--LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQK 240
KC LE K+ + GH V +A +P D++L+ RD VW + + +P
Sbjct: 237 KCWDLEQNKVIRSYHGHLHGVYCLALHPTL-DVVLTGGRDSVCRVWDIRTKMQIFVLP-- 293
Query: 241 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSL 408
H + V+ ++GS D T++ WDL GK+ +H K V + +L
Sbjct: 294 ----HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMAL 345
Score = 34.7 bits (76), Expect = 0.054
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSG 650
GH WV V F P+ N + D T+K+W + LK+ GH G
Sbjct: 168 GHLGWVRSVAFDPS--NEWFCTGSADRTIKIWDVATGVLKLTLTGHIG 213
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 401 VAFSVDNRQIVSGSRDKTIXLWNTLGGV 484
VAF N +GS D+TI +W+ GV
Sbjct: 176 VAFDPSNEWFCTGSADRTIKIWDVATGV 203
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 51.2 bits (117), Expect = 6e-07
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 1/132 (0%)
Frame = +1
Query: 22 DLTLQ-WSRRSSNHFQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 198
D TL+ WS + + LK R + H+ + +A + ++ + S D+T +W
Sbjct: 468 DRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAV-ARNDSLVCTGSEDRTASIW 526
Query: 199 KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED 378
+L + L GH I V S+ ++ S DKT+++W ++ G + FE
Sbjct: 527 RLPDL-----VHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEG 581
Query: 379 HTKDVLSGSLLS 414
HT VL S ++
Sbjct: 582 HTSSVLRASFIT 593
Score = 46.8 bits (106), Expect = 1e-05
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Frame = +1
Query: 19 PDLTLQWSRRSSNHFQKC-LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIV 195
PD L +S S + LETLK + +GH G V +A + ++ ++ D+ ++V
Sbjct: 70 PDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHAS-GGLLATAGADRKVLV 128
Query: 196 WKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGN--YALSGSWDKTLRLWDLAAGKTTRR 369
W + + G GH +S ++ D N +SGS D T+R+WDL A T ++
Sbjct: 129 WDV-----DGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKK 183
Score = 44.0 bits (99), Expect = 9e-05
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 103 RGHNGWVTQIATNP-KYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
RGH G V+ I +P ++++S S D T+ VW L +N + H ++ +
Sbjct: 141 RGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNA-KNTEKKCLAIMEKHFSAVTSIA 199
Query: 280 LSSDGNYALSGSWDKTLRLWDL 345
LS DG S DK + LWDL
Sbjct: 200 LSEDGLTLFSAGRDKVVNLWDL 221
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = +1
Query: 94 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL--TRDENNYGIPQKR---LYGHS 258
G GHNG + +A K +S S D+TL VW L +++ I K + H
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHD 499
Query: 259 HFISDVVLSSDGNYALSGSWDKTLRLWDL 345
I+ V ++ + + +GS D+T +W L
Sbjct: 500 KDINSVAVARNDSLVCTGSEDRTASIWRL 528
Score = 35.1 bits (77), Expect = 0.041
Identities = 22/99 (22%), Positives = 44/99 (44%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
TL+GH + + + ++++S DKT+ +W ++ G K GH+ +
Sbjct: 536 TLKGHKRRIFSVEFST-VDQCVMTASGDKTVKIWAISD-----GSCLKTFEGHTSSVLRA 589
Query: 277 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
+DG +S D L+LW++ + ++ H V
Sbjct: 590 SFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKV 628
Score = 34.7 bits (76), Expect = 0.054
Identities = 28/126 (22%), Positives = 54/126 (42%)
Frame = +1
Query: 88 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 267
++ T+ G + +T +A +P ++ S+ + + VW L E I + GH +
Sbjct: 52 VKSTIEGESDTLTALALSPD-DKLLFSAGHSRQIRVWDL---ETLKCIRSWK--GHEGPV 105
Query: 268 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS*QPSDSVWFSR 447
+ + G + D+ + +WD+ G T F H K V+S L + ++ S
Sbjct: 106 MGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGH-KGVVSSILFHPDSNKNILISG 164
Query: 448 QDYXTL 465
D T+
Sbjct: 165 SDDATV 170
Score = 33.9 bits (74), Expect = 0.095
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +1
Query: 79 TLKLRGTLRGHNGWVTQIAT--NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 252
T+ L GH V + T + +I++ S+DKT+ +W T ++ G+ G
Sbjct: 390 TMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNAT-SKSCIGVGT----G 444
Query: 253 HSHFISDVVLSSDG-NYALSGSWDKTLRLWDL 345
H+ I V + ++ +SGS D+TL++W L
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 244 LYGHSHFIS--DVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
L GH + D +SS GN + +GS DKT+RLW+ + H D+L+
Sbjct: 397 LAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILA 451
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHL 608
GH VS + F P+ I++S D TV+VW L
Sbjct: 142 GHKGVVSSILFHPDSNKNILISGSDDATVRVWDL 175
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSG 650
+G SD ++ + SP+ + ++ S G ++VW L K + GH G
Sbjct: 57 EGESDTLTALALSPD--DKLLFSAGHSRQIRVWDLETLKCIRSWKGHEG 103
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 410 SVDNRQIVSGSRDKTIXLWN 469
S N IV+GS+DKT+ LWN
Sbjct: 413 SSGNVLIVTGSKDKTVRLWN 432
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 279
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
D Y ++GS D T ++WD + + HT +V
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNV 232
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLK 626
DGH+ VS V F P PII++ D TV++WH T +L+
Sbjct: 226 DGHTHNVSAVCFHPEL--PIIITGSEDGTVRIWHATTYRLE 264
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHL 608
+GHS +V V F+P N S D T+K+W+L
Sbjct: 139 EGHSHYVMQVVFNPKDTN-TFASASLDRTIKIWNL 172
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVL 396
HS +I V + Y LS S D ++LWD G T+ FE H+ V+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVM 146
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 339
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTN 614
+ HSD++ CV P P ++S D +K+W N
Sbjct: 96 EAHSDYIRCVAVHP--TLPYVLSSSDDMLIKLWDWEN 130
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVW 602
D H V+CV + P +++ D T KVW
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 279
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
D Y ++GS D T ++WD + + HT +V
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNV 232
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLK 626
DGH+ VS V F P PII++ D TV++WH T +L+
Sbjct: 226 DGHTHNVSAVCFHPEL--PIIITGSEDGTVRIWHATTYRLE 264
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHL 608
+GHS +V V F+P N S D T+K+W+L
Sbjct: 139 EGHSHYVMQVVFNPKDTN-TFASASLDRTIKIWNL 172
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVL 396
HS +I V + Y LS S D ++LWD G T+ FE H+ V+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVM 146
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 339
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTN 614
+ HSD++ CV P P ++S D +K+W N
Sbjct: 96 EAHSDYIRCVAVHP--TLPYVLSSSDDMLIKLWDWEN 130
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVW 602
D H V+CV + P +++ D T KVW
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 279
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
D Y ++GS D T ++WD + + HT +V
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNV 232
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLK 626
DGH+ VS V F P PII++ D TV++WH T +L+
Sbjct: 226 DGHTHNVSAVCFHPEL--PIIITGSEDGTVRIWHATTYRLE 264
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHL 608
+GHS +V V F+P N S D T+K+W+L
Sbjct: 139 EGHSHYVMQVVFNPKDTN-TFASASLDRTIKIWNL 172
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVL 396
HS +I V + Y LS S D ++LWD G T+ FE H+ V+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVM 146
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 339
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTN 614
+ HSD++ CV P P ++S D +K+W N
Sbjct: 96 EAHSDYIRCVAVHP--TLPYVLSSSDDMLIKLWDWEN 130
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVW 602
D H V+CV + P +++ D T KVW
Sbjct: 182 DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVW 214
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 51.2 bits (117), Expect = 6e-07
Identities = 31/97 (31%), Positives = 46/97 (47%)
Frame = +1
Query: 103 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 282
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 283 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
S G + LSGS D +RLWDL + + HT V
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSV 300
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 51.2 bits (117), Expect = 6e-07
Identities = 31/97 (31%), Positives = 46/97 (47%)
Frame = +1
Query: 103 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 282
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 283 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
S G + LSGS D +RLWDL + + HT V
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSV 300
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 50.8 bits (116), Expect = 8e-07
Identities = 31/97 (31%), Positives = 46/97 (47%)
Frame = +1
Query: 109 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 288
H G VT + N K M+ S S+D +I+W + + + RL GH ++D+V
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLVFLD 158
Query: 289 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
G +S S DK LR+WDL + H +V S
Sbjct: 159 GGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWS 195
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL 396
LYGH + + +SSDG ++GS DK L++W L G + H V+
Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVM 628
Score = 35.1 bits (77), Expect = 0.041
Identities = 25/107 (23%), Positives = 49/107 (45%)
Frame = +1
Query: 73 LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 252
+++LK +L GH V I + ++I++ S+DK L +W L ++G K ++
Sbjct: 569 MDSLKFYLSLYGHKLPVMCIDISSD-GELIVTGSQDKNLKIWGL-----DFGDCHKSIFA 622
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
H + V + +Y S D+ ++ WD + E H ++
Sbjct: 623 HGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEI 669
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 342
L GH I + +S+ G++ ++GS D+++R WD
Sbjct: 662 LEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/109 (26%), Positives = 50/109 (45%)
Frame = +1
Query: 73 LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 252
LE K+ TL GH + +P + + S S D L +W + + + G
Sbjct: 88 LEEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----G 141
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
H+ ++ + + DG + +SG D +++WDL AGK F+ H + S
Sbjct: 142 HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQS 190
Score = 36.7 bits (81), Expect = 0.013
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
LYGHS I V + +G+ T++LWDL K R H + +S
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS 106
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSG 650
GH+ V+ +RF+P+ +VS G D VKVW LT KL H G
Sbjct: 141 GHTRGVNVLRFTPD--GRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG 186
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/109 (26%), Positives = 50/109 (45%)
Frame = +1
Query: 73 LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 252
LE K+ TL GH + +P + + S S D L +W + + + G
Sbjct: 88 LEEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----G 141
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
H+ ++ + + DG + +SG D +++WDL AGK F+ H + S
Sbjct: 142 HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQS 190
Score = 36.7 bits (81), Expect = 0.013
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
LYGHS I V + +G+ T++LWDL K R H + +S
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCIS 106
Score = 35.1 bits (77), Expect = 0.041
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSG 650
GH+ V+ +RF+P+ +VS G D VKVW LT KL H G
Sbjct: 141 GHTRGVNVLRFTPD--GRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG 186
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/109 (26%), Positives = 50/109 (45%)
Frame = +1
Query: 73 LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 252
LE K+ TL GH + +P + + S S D L +W + + + G
Sbjct: 181 LEEAKVVRTLTGHRSNCVSVNFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----G 234
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
H+ ++ + + DG + +SG D +++WDL AGK F+ H + S
Sbjct: 235 HTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQS 283
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
LYGHS I V + +G+ T++LWDL K R H + +S
Sbjct: 148 LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVS 199
Score = 35.1 bits (77), Expect = 0.041
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSG 650
GH+ V+ +RF+P+ IVS G D VKVW LT KL H G
Sbjct: 234 GHTRGVNVLRFTPD--GRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG 279
Score = 28.3 bits (60), Expect = 4.7
Identities = 23/83 (27%), Positives = 31/83 (37%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
T +GH V + P I+S D + VW LT G H I +
Sbjct: 231 TYKGHTRGVNVLRFTPD-GRWIVSGGEDNVVKVWDLTA-----GKLLHEFKSHEGKIQSL 284
Query: 277 VLSSDGNYALSGSWDKTLRLWDL 345
+GS DKT++ WDL
Sbjct: 285 DFHPHEFLLATGSADKTVKFWDL 307
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +1
Query: 106 GHNGW-VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 282
GH GW V + +P +++S +D+ + +W TR G L+GH + + V
Sbjct: 266 GH-GWDVKSVDWHPT-KSLLVSGGKDQLVKLWD-TRS----GRELCSLHGHKNIVLSVKW 318
Query: 283 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
+ +GN+ L+ S D+ ++L+D+ K + F HTKDV S
Sbjct: 319 NQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTS 357
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/89 (26%), Positives = 40/89 (44%)
Frame = +1
Query: 73 LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 252
+ T+K + RGH VT +A +P + + +S S D ++ W + + IP
Sbjct: 339 IRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPN----A 394
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLW 339
H + + D+ G SGS D T + W
Sbjct: 395 HDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 570 SCGWDXTVKVWHLTNCKLKINHLGHSG 650
SC D TVKVW T C + + G+ G
Sbjct: 224 SCSDDTTVKVWDFTKCVDESSLTGYIG 250
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 48.0 bits (109), Expect = 5e-06
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = +1
Query: 154 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 333
+M+ S S+D + +W++ G+ +R HS ++ + S DG+ LS S+D+T R
Sbjct: 276 EMLASGSQDGKIKIWRIRT-----GVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTAR 330
Query: 334 LWDLAAGKTTRRFEDHTKDV 393
+ L +GK + F HT V
Sbjct: 331 IHGLKSGKLLKEFRGHTSYV 350
Score = 34.7 bits (76), Expect = 0.054
Identities = 21/78 (26%), Positives = 42/78 (53%)
Frame = +1
Query: 109 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 288
H+ VT ++ + + +LS+S D+T + L G K GH+ +++ + +S
Sbjct: 304 HSQGVTSLSFS-RDGSQLLSTSFDQTARIHGLKS-----GKLLKEFRGHTSYVNHAIFTS 357
Query: 289 DGNYALSGSWDKTLRLWD 342
DG+ ++ S D T+++WD
Sbjct: 358 DGSRIITASSDCTVKVWD 375
Score = 33.5 bits (73), Expect = 0.13
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Frame = +1
Query: 160 ILSSSRDKTLIVW-----KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDK 324
+ SSS D + VW KL +D Y + + H + + S D SGS D
Sbjct: 228 LASSSVDGFIEVWDYISGKLKKDLQ-YQADESFMM-HDDPVLCIDFSRDSEMLASGSQDG 285
Query: 325 TLRLWDLAAGKTTRRFEDHTKDVLS 399
+++W + G RRF+ H++ V S
Sbjct: 286 KIKIWRIRTGVCIRRFDAHSQGVTS 310
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 103 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 282
RGH G + ++ + K +LSSS D+T+ +W++ + R++ H F++ V
Sbjct: 360 RGHTGEILDLSWSEK--GFLLSSSVDETVRLWRVGSSDECI-----RVFSHKSFVTCVAF 412
Query: 283 SS-DGNYALSGSWDKTLRLWDLA 348
+ D NY +SGS D +R+WD++
Sbjct: 413 NPVDDNYFISGSIDGKVRIWDVS 435
Score = 31.9 bits (69), Expect = 0.38
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 232 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
PQ GH+ I D+ S G + LS S D+T+RLW + + R H
Sbjct: 355 PQHEFRGHTGEILDLSWSEKG-FLLSSSVDETVRLWRVGSSDECIRVFSH 403
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 46.8 bits (106), Expect = 1e-05
Identities = 35/120 (29%), Positives = 56/120 (46%)
Frame = +1
Query: 49 SSNHFQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 228
S+N F + + ++R TL GH V + + ++S++ D+T+ +W L + G
Sbjct: 294 SNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHK-----G 348
Query: 229 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSL 408
+ S+ + + LS DG SG D LRLWD+ GK H+ V S SL
Sbjct: 349 YCTNTVLFTSN-CNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSL 407
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 339
+ + +D+ + +W + N G K LYG I D+ ++ D ++ + L +W
Sbjct: 246 LFTGGQDRAVKMW-----DTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVW 300
Query: 340 DLAAGKTTRRFEDHTKDV 393
D+++G+ HT V
Sbjct: 301 DVSSGRVRHTLTGHTDKV 318
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +3
Query: 507 GHSDWVSCV---RFSPNHANPIIVSCGWDXTVKVWHL 608
GH+D V V +FS H +VS +D T+K+W L
Sbjct: 313 GHTDKVCAVDVSKFSSRH----VVSAAYDRTIKLWDL 345
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/101 (29%), Positives = 45/101 (44%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
T GH + ++A +P + ++S DKT +W + N G GHS + +
Sbjct: 334 TFEGHLDRLARVAFHPS-GKYLGTTSYDKTWRLWDI-----NTGAELLLQEGHSRSVYGI 387
Query: 277 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
DG A S D R+WDL G++ F+ H K V S
Sbjct: 388 AFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFS 428
Score = 33.9 bits (74), Expect = 0.095
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = +1
Query: 109 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 288
H V+Q+ P+ + ++S D + +W RD + K L GH ++ + +++
Sbjct: 464 HANLVSQVKYEPQEGYFLATASYDMKVNIWS-GRDFSLV----KSLAGHESKVASLDITA 518
Query: 289 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
D + + S D+T++LW ++G E T D+
Sbjct: 519 DSSCIATVSHDRTIKLW-TSSGNDDEDEEKETMDI 552
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/76 (25%), Positives = 30/76 (39%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS*QPSD 429
GH + V S +G + SG D R+WDL K+ H V S + +P +
Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLV---SQVKYEPQE 477
Query: 430 SVWFSRQDYXTLEHPW 477
+ + Y + W
Sbjct: 478 GYFLATASYDMKVNIW 493
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +1
Query: 94 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 273
G + GH V+ +A NP Y I S+S D + +W ++ P GH +
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFP-----GHQGAVRG 104
Query: 274 VVLSSDGNYALSGSWDKTLRLWDL 345
+ S+DGN +S D T+RLW++
Sbjct: 105 LTASTDGNVLVSCGTDCTVRLWNV 128
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSG 650
DGH D VSC+ +PN+ I S D +++W +++ + GH G
Sbjct: 53 DGHRDGVSCMAKNPNYLKGIF-SASMDGDIRLWDISSRRTVCQFPGHQG 100
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 274 VVLSSDGNYALSGSWDKTLRLWDLAAGK 357
V S D Y +SGS D LRLW A +
Sbjct: 328 VKYSCDATYVISGSDDTNLRLWKAKASE 355
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +3
Query: 561 IIVSCGWDXTVKVWHLTNCKLKINHLGHSGY 653
++VSCG D TV++W++ L+ + + +
Sbjct: 113 VLVSCGTDCTVRLWNVPRPSLEDSSISSENF 143
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/103 (30%), Positives = 51/103 (49%)
Frame = +1
Query: 85 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 264
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 265 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
+ V + Y +S S D T +DL++G + D +K+V
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNV 354
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/103 (30%), Positives = 51/103 (49%)
Frame = +1
Query: 85 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 264
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 265 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
+ V + Y +S S D T +DL++G + D +K+V
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNV 354
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +1
Query: 100 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 258
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 259 HFISDVVLSSDGNYALSGSWDKTLRLWD 342
+ V GN S SWD T+ LW+
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 35.5 bits (78), Expect = 0.031
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Frame = +1
Query: 79 TLKLRG--TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-------------RD 213
T K+R LRGH V ++ K +M+ SSS D T+ +W R
Sbjct: 192 TTKVRAYKILRGHKASVQSVSAQ-KSGNMVCSSSWDCTINLWNTNESTSEGESVSVKKRK 250
Query: 214 ENNY-------GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 357
NN G L GH+ +S VV + + S SWD ++R WD+ GK
Sbjct: 251 GNNQAEESQSEGEAVTSLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDVETGK 304
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +1
Query: 100 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 258
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 259 HFISDVVLSSDGNYALSGSWDKTLRLWD 342
+ V GN S SWD T+ LW+
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 35.5 bits (78), Expect = 0.031
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Frame = +1
Query: 79 TLKLRG--TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-------------RD 213
T K+R LRGH V ++ K +M+ SSS D T+ +W R
Sbjct: 192 TTKVRAYKILRGHKASVQSVSAQ-KSGNMVCSSSWDCTINLWNTNESTSEGESVSVKKRK 250
Query: 214 ENNY-------GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 357
NN G L GH+ +S VV + + S SWD ++R WD+ GK
Sbjct: 251 GNNQAEESQSEGEAVTSLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDVETGK 304
Score = 28.7 bits (61), Expect = 3.6
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL-SSDGNYALSGSWDKTLR 333
+I + D L VW + + P + HS +IS S + LS S+D +
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTS--APVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIM 384
Query: 334 LWDLAAGKTTRRFEDHTKDVLS 399
LWDL + H VLS
Sbjct: 385 LWDLRTAWPLSVIDTHNDKVLS 406
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +1
Query: 103 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 282
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDEC------LRTFTHNNFVTCVAF 370
Query: 283 SS-DGNYALSGSWDKTLRLWDL 345
+ D NY +SGS D +R+WD+
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDV 392
Score = 33.9 bits (74), Expect = 0.095
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 483 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKL 623
C ++ H+++V+CV F+P N +S D V++W +T C++
Sbjct: 352 CDECLRTFTHNNFVTCVAFNPVDDN-YFISGSIDGKVRIWDVTRCRV 397
Score = 31.9 bits (69), Expect = 0.38
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +1
Query: 163 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 333
L S D T +V T + I +K L+ GH I D+ S G Y LS S D+T+R
Sbjct: 292 LRKSSDSTCVVLPPTI----FSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 334 LWDLAAGKTTRRF 372
LW + + R F
Sbjct: 347 LWRVGCDECLRTF 359
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 109 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 210
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +1
Query: 103 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 282
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDEC------LRTFTHNNFVTCVAF 370
Query: 283 SS-DGNYALSGSWDKTLRLWDL 345
+ D NY +SGS D +R+WD+
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDV 392
Score = 33.9 bits (74), Expect = 0.095
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 483 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKL 623
C ++ H+++V+CV F+P N +S D V++W +T C++
Sbjct: 352 CDECLRTFTHNNFVTCVAFNPVDDN-YFISGSIDGKVRIWDVTRCRV 397
Score = 31.9 bits (69), Expect = 0.38
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +1
Query: 163 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 333
L S D T +V T + I +K L+ GH I D+ S G Y LS S D+T+R
Sbjct: 292 LRKSSDSTCVVLPPTI----FSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 334 LWDLAAGKTTRRF 372
LW + + R F
Sbjct: 347 LWRVGCDECLRTF 359
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 109 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 210
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 45.2 bits (102), Expect = 4e-05
Identities = 30/102 (29%), Positives = 52/102 (50%)
Frame = +1
Query: 85 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 264
++ TL GH+ VT I D++L++S DKT+ +W + D NY + L HS
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSED-GNY-TSRHTLKDHSAE 311
Query: 265 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 390
+ V + + Y +S S D T +DL++G + D +++
Sbjct: 312 VRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASEN 353
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA-GKTTRR--FEDHTKDV 393
L GHS ++ + D + L+ S DKT+R+W + G T R +DH+ +V
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEV 312
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 44.8 bits (101), Expect = 5e-05
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = +1
Query: 85 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 264
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 265 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
+ + + Y +SGS D + +W+L G+ + + H V
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQV 116
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 44.8 bits (101), Expect = 5e-05
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Frame = +1
Query: 85 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 264
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 265 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
+ + + Y +SGS D + +W+L G+ + + H V
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQV 116
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 44.4 bits (100), Expect = 7e-05
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 118 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKR-LYGHSHFISDVVLSSDG 294
W Q + N KY + SSS+D+T I+W+++ D + I K L GH + ++ S D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISADGH---ISLKHTLVGHHKPVIAILWSPDD 331
Query: 295 NYALSGSWDKTLRLWDLAAGKTTRRFE 375
L+ ++ +R WD+ +G +E
Sbjct: 332 RQVLTCGAEEVIRRWDVDSGDCVHMYE 358
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 486 KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHL 608
K ++ GH+ V+CV +SP + + ++ S D T+++W L
Sbjct: 522 KLIVELPGHAGAVNCVSWSPTNLH-MLASASDDGTIRIWGL 561
Score = 30.7 bits (66), Expect = 0.88
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = +1
Query: 79 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 258
T KL L GH G V ++ +P M+ S+S D T+ +W L R N +K + G S
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR-INQQNQKKKLVQGSS 578
Query: 259 HFISDVVLSSDGN 297
+ V+ +GN
Sbjct: 579 S--NGVIHRCNGN 589
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +1
Query: 148 YPDM--ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWD 321
YPD I++ D+++ +W L E Q+ + +SD+ ++ DG + +S D
Sbjct: 370 YPDGQGIIAGMTDRSICMWDLDGREKECWKGQR-----TQKVSDIAMTDDGKWLVSVCKD 424
Query: 322 KTLRLWDLAAGKTTRRFEDHTKDVLSGSL 408
+ L+D A T R + + S SL
Sbjct: 425 SVISLFDREA--TVERLIEEEDMITSFSL 451
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 44.0 bits (99), Expect = 9e-05
Identities = 26/96 (27%), Positives = 49/96 (51%)
Frame = +1
Query: 112 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 291
+G V Q+ + D++ + ++D +++ W+ N + P L GH+ ++ V L
Sbjct: 227 SGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFE-PSASLTGHT--LAVVTLYVG 283
Query: 292 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
N SGS DKT+++W L + + DH+ V+S
Sbjct: 284 ANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMS 319
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 241 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 363
+L GH +S + L S + +GS D+TLR+WD A+G+ T
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCT 186
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 76 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 198
E+ L L GH V+ IA P D + + S+D+TL VW
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 44.0 bits (99), Expect = 9e-05
Identities = 31/105 (29%), Positives = 47/105 (44%)
Frame = +1
Query: 85 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 264
KL L GHN V + +P P ++ S S D + + + G + GH+ +
Sbjct: 191 KLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD-AEGKTLLG----SMSGHTSW 245
Query: 265 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
+ V S DG +GS D+T+RLWDL + +H V S
Sbjct: 246 VLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWS 290
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 44.0 bits (99), Expect = 9e-05
Identities = 33/110 (30%), Positives = 57/110 (51%)
Frame = +1
Query: 46 RSSNHFQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 225
+SS+H + LET ++GH +T + N + D++ S ++D T VW +N
Sbjct: 17 KSSSH--QTLETRMRPILMKGHERPLTFLRYN-RNGDLLFSCAKDHTPTVWFA---DNGE 70
Query: 226 GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 375
+ R GHS + +S D + ++GS D+T +LWD+ +GK F+
Sbjct: 71 RLGTYR--GHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFK 118
Score = 34.7 bits (76), Expect = 0.054
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
GH I+ + ++D ++ L+GS DKT +LWD+
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDM 249
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSG 650
GH ++ +R++ N ++ SC D T VW N + + GHSG
Sbjct: 35 GHERPLTFLRYNRN--GDLLFSCAKDHTPTVWFADNGERLGTYRGHSG 80
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/98 (28%), Positives = 45/98 (45%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L+GH G V N + L+ +D+T+ +W R GI K H + DV
Sbjct: 14 LKGHEGAVLAARFNGD-GNYALTCGKDRTIRLWNPHR-----GILIKTYKSHGREVRDVH 67
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
++SD S D+ + WD++ G+ R+F H +V
Sbjct: 68 VTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEV 105
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 265 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
++ + +S+DGN L+G D TLRL D G+ + ++ H
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGH 225
Score = 30.7 bits (66), Expect = 0.88
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 85 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 201
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVW 602
GH V+ V+F N ++ ++VS G+D +++VW
Sbjct: 100 GHDGEVNAVKF--NDSSSVVVSAGFDRSLRVW 129
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +1
Query: 238 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 342
++ GH ++ V + + +S +D++LR+WD
Sbjct: 96 RKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +1
Query: 49 SSNHFQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 228
+S +K + ++ + +L H V I +P +++ S + L +WKL E N
Sbjct: 43 NSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQS 101
Query: 229 IP-QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
K L H + D+ S D Y +SGS D + +WD+ G + + H
Sbjct: 102 WKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAH 153
Score = 31.1 bits (67), Expect = 0.67
Identities = 23/94 (24%), Positives = 41/94 (43%)
Frame = +1
Query: 58 HFQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 237
H + ++ K+ +L H V + +P ++S S D + I+W + N G
Sbjct: 94 HPSETNQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDV-----NKGSVH 147
Query: 238 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 339
+ L H H++ V Y S S D+T R++
Sbjct: 148 QILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +1
Query: 49 SSNHFQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 228
+S +K + ++ + +L H V I +P +++ S + L +WKL E N
Sbjct: 43 NSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQS 101
Query: 229 IP-QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
K L H + D+ S D Y +SGS D + +WD+ G + + H
Sbjct: 102 WKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAH 153
Score = 31.1 bits (67), Expect = 0.67
Identities = 23/94 (24%), Positives = 41/94 (43%)
Frame = +1
Query: 58 HFQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 237
H + ++ K+ +L H V + +P ++S S D + I+W + N G
Sbjct: 94 HPSETNQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDV-----NKGSVH 147
Query: 238 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 339
+ L H H++ V Y S S D+T R++
Sbjct: 148 QILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
TL GH ++ + + +YP I+S+S D+T+ +W + + L GH+H++
Sbjct: 88 TLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW-QSRTCVSV----LTGHNHYVMCA 141
Query: 277 VLSSDGNYALSGSWDKTLRLWDLAA 351
+ +S S D+T+R+WD+ A
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGA 166
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L GH+ V A +P P +I+S + D+ + +W++ + L GH + +S V+
Sbjct: 200 LEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNETK---AWEVDTLRGHMNNVSSVM 255
Query: 280 LSSDGNYALSGSWDKTLRLWD 342
+ + +S S DK++R+WD
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWD 276
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 210
TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 243 TLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +3
Query: 483 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSGY 653
C +T+ GH D++ V+F +H P IVS D T+++W+ + GH+ Y
Sbjct: 85 CLFTLL--GHLDYIRTVQF--HHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHY 137
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSGY 653
D H V V F +++ P+ VS G D +KVW+ N + LGH Y
Sbjct: 48 DEHEGPVRGVHF--HNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDY 95
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 238 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 366
K+L GHS ++D SS+ Y S S DKT+R+W+L+ G R
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIR 252
Score = 37.1 bits (82), Expect = 0.010
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Frame = +1
Query: 4 F*HVLPDLTLQWSRRSSNHFQKCLETLKLRGTLRGHNGWVTQI--ATNPKYPDMILSSSR 177
F H+ D+ + S LE + L GH+ VT ++N +Y I SSS
Sbjct: 180 FGHMSSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQY---IASSSL 236
Query: 178 DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 357
DKT+ VW+L+R G+ + +YG S + N+ +G+ +K L +++ + G+
Sbjct: 237 DKTIRVWELSR-----GVCIRVIYGISPQYCIRFHPVNNNFLSAGNANKELTVFNFSTGR 291
Query: 358 TTRR--FED 378
++ FED
Sbjct: 292 IIKKLLFED 300
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 407 FSVDNRQIVSGSRDKTIXLWNTLGGV 484
FS +N+ I S S DKTI +W GV
Sbjct: 224 FSSNNQYIASSSLDKTIRVWELSRGV 249
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 42.3 bits (95), Expect = 3e-04
Identities = 30/100 (30%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = +1
Query: 103 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 282
RGH G V I+ + + +LS+S DKT+ +WK+ ++ G+ + H+ +++ V
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKVGSNDC-LGV-----FAHNSYVTSVQF 376
Query: 283 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
+ + NY +SGS D +R+W++ +G + + D KD++S
Sbjct: 377 NPVNENYFMSGSIDGKVRIWNI-SGCSVVDWAD-LKDIIS 414
Score = 36.3 bits (80), Expect = 0.018
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Frame = +1
Query: 223 YGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA 351
+ I +K LY GH+ + D+ S D NY LS S DKT+RLW + +
Sbjct: 314 FRIMEKPLYEFRGHTGEVLDISWSKD-NYLLSASMDKTVRLWKVGS 358
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
+L+GH + ++ + ++LSSS DKT+ +W + E + +L+ H+ +++ +
Sbjct: 501 SLKGHLDAILDLSWSKS--QLLLSSSMDKTVRLWDI---ETKTCL---KLFAHNDYVTCI 552
Query: 277 VLSS-DGNYALSGSWDKTLRLWDL 345
S D NY LSGS D +R+W +
Sbjct: 553 QFSPVDENYFLSGSLDAKIRIWSI 576
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 480 ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHL 608
E K ++ H+D+V+C++FSP N +S D +++W +
Sbjct: 535 ETKTCLKLFAHNDYVTCIQFSPVDEN-YFLSGSLDAKIRIWSI 576
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +1
Query: 232 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
P L GH I D+ S LS S DKT+RLWD+
Sbjct: 498 PVCSLKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDI 534
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 41.5 bits (93), Expect = 5e-04
Identities = 29/87 (33%), Positives = 49/87 (56%)
Frame = +1
Query: 85 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 264
+LR TL+GH G V I+++ I+S S D ++IVW D+ + ++ L GH
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW----DKQTTQLLEE-LKGHDSQ 941
Query: 265 ISDVVLSSDGNYALSGSWDKTLRLWDL 345
+S V + S G L+ + D T+++WD+
Sbjct: 942 VSCVKMLS-GERVLTAAHDGTVKMWDV 967
Score = 31.1 bits (67), Expect = 0.67
Identities = 26/108 (24%), Positives = 50/108 (46%)
Frame = +1
Query: 76 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 255
+T +L L+GH+ V+ + + +L+++ D T+ +W + D + +
Sbjct: 927 QTTQLLEELKGHDSQVSCVKMLSG--ERVLTAAHDGTVKMWDVRTDMCVATVGRCS---- 980
Query: 256 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
S +S S G A +G D +WD+ +GK + + HTK + S
Sbjct: 981 SAILSLEYDDSTGILAAAGR-DTVANIWDIRSGKQMHKLKGHTKWIRS 1027
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 41.1 bits (92), Expect = 6e-04
Identities = 28/105 (26%), Positives = 47/105 (44%)
Frame = +1
Query: 37 WSRRSSNHFQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 216
W + + K L L HN + +A + ++ S D +++VW+ RD+
Sbjct: 234 WRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWE--RDD 291
Query: 217 NNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA 351
+ L GH+ + + + SD SGS DKT+RLW +A
Sbjct: 292 GGDIVVVGMLRGHTESVLCLAVVSD--ILCSGSADKTVRLWKCSA 334
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS 414
H +S + LS DG S SWD+TL++W K F + D ++ LS
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALS 217
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 510 HSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCK 620
H D VS + S + ++ S WD T+K+W T+ K
Sbjct: 164 HVDAVSGLALSRD--GTLLYSVSWDRTLKIWRTTDFK 198
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 40.7 bits (91), Expect = 8e-04
Identities = 24/96 (25%), Positives = 49/96 (51%)
Frame = +1
Query: 112 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 291
NG V Q+ + D++ + ++D +++VW+ + + P L GH+ ++ V L
Sbjct: 220 NGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFD-PAASLLGHT--LAVVSLYVG 276
Query: 292 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
N SG+ D ++++W L + + +HT V+S
Sbjct: 277 ANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMS 312
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 241 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 363
+L GH ++ + L S + + S D+T+R+WD A+G+ T
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCT 179
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 40.7 bits (91), Expect = 8e-04
Identities = 29/103 (28%), Positives = 44/103 (42%)
Frame = +1
Query: 73 LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 252
+E K TLRGH V + +P M+ S S D T+ +W + G+ L G
Sbjct: 105 VENWKAVMTLRGHTADVVDLNWSPD-DSMLASGSLDNTVHIWNMRT-----GMCTTVLRG 158
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
H + V G++ S S DKT+ +W + R + H
Sbjct: 159 HLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 39.1 bits (87), Expect(2) = 0.001
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 247 YGHSHFISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTRRFEDHTKDVLSG 402
+ H IS + LS D SGSWDKT ++W DL ++ ED V+SG
Sbjct: 208 FRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSG 262
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +1
Query: 121 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 300
VT IA + ++ S D T+ W+ + N G+ L GH ++ + L + GN
Sbjct: 303 VTAIAVDQS-ATLVYCGSSDGTVNFWERENNMKNGGV----LKGHK--LAVLCLVAAGNL 355
Query: 301 ALSGSWDKTLRLW 339
SGS D +R+W
Sbjct: 356 MFSGSADLGIRVW 368
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 510 HSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCK 620
H D +SC+ S + ++ S WD T KVW +++ +
Sbjct: 210 HLDAISCLALSEDKR--LLYSGSWDKTFKVWRVSDLR 244
Score = 20.6 bits (41), Expect(2) = 0.001
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +1
Query: 154 DMILSSSRDKTLIVWKLTRDENN 222
D I + +D + VWK E+N
Sbjct: 147 DKIFTGHQDGKIRVWKAASKESN 169
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIPQ-KRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 333
M+ + + +++VWK T D + L GHS ++ + G SGS DKT++
Sbjct: 224 MLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVG--GQMLYSGSVDKTIK 281
Query: 334 LWDLAAGKTTRRFEDHTKDVLS 399
+WDL + + HT V S
Sbjct: 282 MWDLNTLQCIMTLKQHTGTVTS 303
Score = 30.7 bits (66), Expect = 0.88
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS*QP 423
L GH+ + + L + S S D TLR+WD +G+ D +GSL+S P
Sbjct: 127 LEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSI---NLDAEAGSLISEGP 183
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/80 (26%), Positives = 41/80 (51%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
LRGH V ++ N ++ + RDK++ +W++ +E++ L GHS + V+
Sbjct: 88 LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVL 146
Query: 280 LSSDGNYALSGSWDKTLRLW 339
+ S S+D T+++W
Sbjct: 147 WHPTMDVLFSCSYDNTIKIW 166
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 201
L GH V +A NP +I S S DKT+ +W+
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVW 602
+GH+D V V ++P A+ +I SC D TV++W
Sbjct: 17 EGHTDRVWNVAWNPA-ADGVIASCSADKTVRIW 48
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVW 602
GHS+ V V + P ++ SC +D T+K+W
Sbjct: 137 GHSEDVKMVLWHPTM--DVLFSCSYDNTIKIW 166
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +1
Query: 73 LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 252
+ET + RGH G +T +A + ++ S+S D + VW+L G+P L G
Sbjct: 334 METALCLASCRGHEGDITDLAVSSNNA-LVASASNDFVIRVWRLPD-----GMPISVLRG 387
Query: 253 HSHFISDVVLS---SDGNYALSGSWDKTLRLWD 342
H+ ++ + S + LS S D T R+WD
Sbjct: 388 HTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
Score = 34.3 bits (75), Expect = 0.072
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 13/114 (11%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVWKLTRDE----------NNYGIPQKR 243
LRGH G VT IA +P+ + +LSSS D T +W + ++
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDANTGSTS 444
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSG 402
SH I +++G ++GS D R+W + + H DVL G
Sbjct: 445 NASQSHQILCCAYNANGTIFVTGSSDSNARVWSASKPNLDDAEQPTHELDVLRG 498
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +1
Query: 238 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
K+L GH + + + G Y ++GS D+ +++W + H D+
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDI 350
Score = 32.7 bits (71), Expect = 0.22
Identities = 26/95 (27%), Positives = 41/95 (43%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
LRGH V A + +++ S D+ + +W + E + R GH I+D+
Sbjct: 301 LRGHRNAV-YCAIFDRSGRYVITGSDDRLVKIWSM---ETALCLASCR--GHEGDITDLA 354
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 384
+SS+ S S D +R+W L G HT
Sbjct: 355 VSSNNALVASASNDFVIRVWRLPDGMPISVLRGHT 389
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/87 (27%), Positives = 45/87 (51%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
TL GH ++ + + + P I+S+S D+T+ +W + + L GH+H++
Sbjct: 88 TLLGHLDYIRTVQFHHENP-WIVSASDDQTIRIWNW-QSRTCISV----LTGHNHYVMCA 141
Query: 277 VLSSDGNYALSGSWDKTLRLWDLAAGK 357
+ +S S D+T+R+WD+ A K
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGALK 168
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/81 (27%), Positives = 43/81 (53%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L GH+ V + +P P +I+S + D+ + +W++ + L GH + +S V+
Sbjct: 200 LEGHDRGVNWASFHPTLP-LIVSGADDRQVKLWRMNETK---AWEVDTLRGHMNNVSSVM 255
Query: 280 LSSDGNYALSGSWDKTLRLWD 342
+ + +S S DK++R+WD
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWD 276
Score = 35.5 bits (78), Expect = 0.031
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 483 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSGY 653
C +T+ GH D++ V+F +H NP IVS D T+++W+ + GH+ Y
Sbjct: 85 CLFTLL--GHLDYIRTVQF--HHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHY 137
Score = 34.3 bits (75), Expect = 0.072
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L GHN +V + +PK D+++S+S D+T+ VW + + P L S SD+
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLF 189
Query: 280 LSSDG--NYALSG 312
D Y L G
Sbjct: 190 GGVDAIVKYVLEG 202
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 210
TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 243 TLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSGY 653
D H V V F +++ P+ VS G D +KVW+ + LGH Y
Sbjct: 48 DEHEGPVRGVHF--HNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDY 95
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +1
Query: 211 DENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 342
+EN Y IP + +L GH+ +S + + S G LSGS+D T+R++D
Sbjct: 159 EENRYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYD 205
Score = 33.9 bits (74), Expect = 0.095
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
H+ I+ V SSDG LS S+D +L++WDL
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDL 402
Score = 31.1 bits (67), Expect = 0.67
Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Frame = +1
Query: 103 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF-ISDVV 279
+GH +T +P+ + +L+SS D +L +W + + + + +L ++
Sbjct: 275 KGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCA 334
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRR----FEDHTKDVLS 399
DG G D ++++W L G +R + HT D+ S
Sbjct: 335 WDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITS 378
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 154 DMILSSSRDKTLIVWKLTRDENNYGIP-QKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 330
+++ S + L +WKL E N K L H + D+ S D Y +SGS D +
Sbjct: 18 ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSC 77
Query: 331 RLWDLAAGKTTRRFEDH 381
+WD+ G + + H
Sbjct: 78 IIWDVNKGSVHQILDAH 94
Score = 31.1 bits (67), Expect = 0.67
Identities = 23/94 (24%), Positives = 41/94 (43%)
Frame = +1
Query: 58 HFQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 237
H + ++ K+ +L H V + +P ++S S D + I+W + N G
Sbjct: 35 HPSETNQSWKVHKSLSFHRKDVLDLQWSPD-DAYLISGSVDNSCIIWDV-----NKGSVH 88
Query: 238 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 339
+ L H H++ V Y S S D+T R++
Sbjct: 89 QILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 122
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/94 (26%), Positives = 44/94 (46%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
+L GH VT I + + ++ S+ D + VW + ++ + H+ + DV
Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKK---KVRAFLHHNAPVKDV 211
Query: 277 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED 378
S G LS +D T RL+D+ G T+ F++
Sbjct: 212 KWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKE 245
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR--DE------NNYGIPQKRLY-- 249
L H G V Q+ +P + ++ SS D+ L+VW + R DE + P + L+
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360
Query: 250 -GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLAAGKTTRRFEDHTKD 390
GH ISD + D + +S + D +L++W +A ED D
Sbjct: 361 GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDEDDD 409
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 232 PQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTR 366
P RL GH + SS Y LSGS D+ + LWD++A T +
Sbjct: 161 PDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDK 206
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 336
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 522 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 576
Query: 337 WDLA-AGKTTRRFEDHTKDVLS 399
WD + G R H V+S
Sbjct: 577 WDASDPGYFLRTISGHAAPVMS 598
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 336
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 337 WDLA-AGKTTRRFEDHTKDVLS 399
WD + G R H V+S
Sbjct: 579 WDASDPGYFLRTISGHAAPVMS 600
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 336
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 337 WDLA-AGKTTRRFEDHTKDVLS 399
WD + G R H V+S
Sbjct: 579 WDASDPGYFLRTISGHAAPVMS 600
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 336
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 337 WDLA-AGKTTRRFEDHTKDVLS 399
WD + G R H V+S
Sbjct: 579 WDASDPGYFLRTISGHAAPVMS 600
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 336
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 337 WDLA-AGKTTRRFEDHTKDVLS 399
WD + G R H V+S
Sbjct: 579 WDASDPGYFLRTISGHAAPVMS 600
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/86 (24%), Positives = 39/86 (45%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
T GH G + +A +P ++ + D +WK+ + +P GH +S +
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELP-----GHKDSVSCL 119
Query: 277 VLSSDGNYALSGSWDKTLRLWDLAAG 354
S DG SG D ++++D ++G
Sbjct: 120 AFSYDGQLLASGGLDGVVQIFDASSG 145
Score = 36.7 bits (81), Expect = 0.013
Identities = 28/96 (29%), Positives = 48/96 (50%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 285
GHN VT P +I + S D +LIVW E+ + I + Y H+ ++ + ++
Sbjct: 195 GHNLNVTCGDFTPD-GKLICTGSDDASLIVWNPKTCESIH-IVKGHPY-HTEGLTCLDIN 251
Query: 286 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
S+ + A+SGS D ++ + ++ GK HT V
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSV 287
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 504 DGHSDWVSCVRFSPNHAN-PIIVSCGWDXTVKVWHL 608
+ H+D V CV+FSP+ A P+ + G D + +W L
Sbjct: 281 NSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDL 316
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLK 626
GH D VSC+ FS + ++ S G D V+++ ++ LK
Sbjct: 111 GHKDSVSCLAFS--YDGQLLASGGLDGVVQIFDASSGTLK 148
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 357
GH+ I+D+ S DG + +S S D +LR+WD+ K
Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAK 590
Score = 25.8 bits (54), Expect(2) = 1.4
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = +1
Query: 223 YGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 342
+ + +KR Y H + V S +S + L++WD
Sbjct: 463 FDMSEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWD 502
Score = 22.6 bits (46), Expect(2) = 1.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 319 DKTLRLWDLAAGKTTRRFEDHT 384
D +RL+D+ K R F HT
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHT 557
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKT--TRRFEDHTKDV 393
+S D + ++GS D+T +LWD+ +GK T +F T+ V
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSV 99
Score = 36.3 bits (80), Expect = 0.018
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 336
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 337 WDL 345
WD+
Sbjct: 220 WDM 222
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKT--TRRFEDHTKDV 393
+S D + ++GS D+T +LWD+ +GK T +F T+ V
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSV 99
Score = 36.3 bits (80), Expect = 0.018
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 336
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 337 WDL 345
WD+
Sbjct: 220 WDM 222
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKT--TRRFEDHTKDV 393
+S D + ++GS D+T +LWD+ +GK T +F T+ V
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSV 99
Score = 36.3 bits (80), Expect = 0.018
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 336
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 337 WDL 345
WD+
Sbjct: 220 WDM 222
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +1
Query: 139 NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 318
NP + S+S D T+ +W + G GH + + S +G Y SGS
Sbjct: 507 NPNKQLTLASASFDSTVKLW-----DAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSL 561
Query: 319 DKTLRLWDLAAGKTTRRF 372
DK++ +W + GK + +
Sbjct: 562 DKSIHIWSIKEGKIVKTY 579
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL 396
H I + + G+Y L+GS D+T +WD+ A + ++FE H+ L
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTL 411
Score = 31.9 bits (69), Expect = 0.38
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHL 608
GH V+CV++ P + ++ SC D T K+W++
Sbjct: 446 GHQGEVNCVKWDPTGS--LLASCSDDSTAKIWNI 477
Score = 31.5 bits (68), Expect = 0.51
Identities = 27/103 (26%), Positives = 48/103 (46%)
Frame = +1
Query: 85 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 264
+L TL H G + + N K D +L+ S D+T +VW + +E +++ HS
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEE-----WKQQFEFHSGP 409
Query: 265 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
DV ++ ++A S S D + L + + + F H +V
Sbjct: 410 TLDVDWRNNVSFATS-STDSMIYLCKIGETRPAKTFTGHQGEV 451
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +1
Query: 232 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
P K GH ++ V G+ S S D T ++W++ +HTK++
Sbjct: 440 PAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEI 493
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 389 MYSRVAFSVDNRQIVSGSRDKTIXLWNTLGG 481
+YS +AFS + I SGS DK+I +W+ G
Sbjct: 544 VYS-LAFSPNGEYIASGSLDKSIHIWSIKEG 573
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/78 (23%), Positives = 38/78 (48%)
Frame = +1
Query: 121 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 300
++ ++ +PK D+++++S D + W++TR + + K H + DG
Sbjct: 29 ISSLSFSPK-ADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTT 87
Query: 301 ALSGSWDKTLRLWDLAAG 354
+G DK ++W L +G
Sbjct: 88 VFTGGCDKQAKMWPLLSG 105
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 513 SDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLT 611
+D +S + FSP I+V+ WD V+ W +T
Sbjct: 26 TDSISSLSFSPKA--DILVATSWDCQVRCWEIT 56
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
L GH + ++ S S SWD T+RLWD+ A K T H DVL+
Sbjct: 473 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLT 524
Score = 36.3 bits (80), Expect = 0.018
Identities = 29/130 (22%), Positives = 55/130 (42%)
Frame = +1
Query: 76 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 255
+T +++ L GH V + +P ++ SSS D T+ +W + + + H
Sbjct: 465 KTGQIKDILSGHEAPVHGLMFSP-LTQLLASSSWDYTVRLWDVFASKGTV-----ETFRH 518
Query: 256 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS*QPSDSV 435
+H + V DG S + D + WD G E +D+ G +++ + S +
Sbjct: 519 NHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGR-RDIAGGRVMTDRRSAAN 577
Query: 436 WFSRQDYXTL 465
S + + TL
Sbjct: 578 SSSGKCFTTL 587
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 401 VAFSVDNRQIVSGSRDKTIXLWNTLGGVQVY 493
VAF D +Q+ S + D I W+T+ GV +Y
Sbjct: 525 VAFRPDGKQLASSTLDGQINFWDTIEGVLMY 555
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
GH ++ V S D +G+ D +++W++ +G F +HT V
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAV 394
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 489 YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHS 647
Y ++ GH V+CV +SP+ + ++ + D VKVW++ + I H+
Sbjct: 341 YILKQQGHYFDVNCVTYSPD--SQLLATGADDNKVKVWNVMSGTCFITFTEHT 391
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHS 647
GH V + FSP ++ S WD TV++W + K + H+
Sbjct: 475 GHEAPVHGLMFSP--LTQLLASSSWDYTVRLWDVFASKGTVETFRHN 519
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
L GH + ++ S S SWD T+RLWD+ A K T H DVL+
Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLT 564
Score = 36.3 bits (80), Expect = 0.018
Identities = 29/130 (22%), Positives = 55/130 (42%)
Frame = +1
Query: 76 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 255
+T +++ L GH V + +P ++ SSS D T+ +W + + + H
Sbjct: 505 KTGQIKDILSGHEAPVHGLMFSP-LTQLLASSSWDYTVRLWDVFASKGTV-----ETFRH 558
Query: 256 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS*QPSDSV 435
+H + V DG S + D + WD G E +D+ G +++ + S +
Sbjct: 559 NHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGR-RDIAGGRVMTDRRSAAN 617
Query: 436 WFSRQDYXTL 465
S + + TL
Sbjct: 618 SSSGKCFTTL 627
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 401 VAFSVDNRQIVSGSRDKTIXLWNTLGGVQVY 493
VAF D +Q+ S + D I W+T+ GV +Y
Sbjct: 565 VAFRPDGKQLASSTLDGQINFWDTIEGVLMY 595
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
GH ++ V S D +G+ D +++W++ +G F +HT V
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAV 434
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 489 YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHS 647
Y ++ GH V+CV +SP+ + ++ + D VKVW++ + I H+
Sbjct: 381 YILKQQGHYFDVNCVTYSPD--SQLLATGADDNKVKVWNVMSGTCFITFTEHT 431
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHS 647
GH V + FSP ++ S WD TV++W + K + H+
Sbjct: 515 GHEAPVHGLMFSP--LTQLLASSSWDYTVRLWDVFASKGTVETFRHN 559
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRL 336
+LSSS DKT+ +W L+ +++ HS +++ + + D NY +SGS D +R+
Sbjct: 482 LLSSSMDKTVRLWDLSSKTC------LKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Query: 337 WDL 345
W +
Sbjct: 536 WSI 538
Score = 34.3 bits (75), Expect = 0.072
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +1
Query: 112 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV-LS- 285
NG ++ +PK S SR K++ + + E +G+ +K + + DV+ LS
Sbjct: 419 NGSPEPVSMSPKRRGRT-SFSR-KSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSW 476
Query: 286 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 384
S + LS S DKT+RLWDL++ KT + H+
Sbjct: 477 SKSQHLLSSSMDKTVRLWDLSS-KTCLKVFSHS 508
Score = 31.1 bits (67), Expect = 0.67
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 510 HSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHL 608
HSD+V+C++F+P N +S D V++W +
Sbjct: 507 HSDYVTCIQFNPVDDN-YFISGSLDAKVRIWSI 538
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +1
Query: 109 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 288
H+ +VT I NP + +S S D + +W + ++ + L+ ++ +
Sbjct: 507 HSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIP---DHQVVDWNDLH---EMVTAACYTP 560
Query: 289 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 390
DG AL GS+ T L++ K +R E + K+
Sbjct: 561 DGQGALVGSYKGTCCLYNTHDNKLQQRREINLKN 594
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E + G FI+
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIA-- 421
Query: 277 VLSSDGNYALS-GSWDKTLRLWD 342
S D + L+ G L+LWD
Sbjct: 422 -FSPDNPFLLAMGGVMGELKLWD 443
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 295 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
N S S DK +++WD+A G E HTK+V
Sbjct: 247 NILASASADKKVKVWDVATGTCKITMEHHTKEV 279
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 232 PQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLA 348
P + GH + V + S N +GS D+T++LWDL+
Sbjct: 361 PSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLS 400
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 37.9 bits (84), Expect = 0.006
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 6/112 (5%)
Frame = +1
Query: 79 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 258
T+ RG GH V +A +P S D LI+W N +K
Sbjct: 281 TVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADL 340
Query: 259 HFISDVVLSSDGNYALSGSWDKTLRLWD---LAA---GKTTRRFEDHTKDVL 396
H + D N L+GS D T+RL+D L A G +FE H VL
Sbjct: 341 HCVD--WNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVL 390
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Frame = +1
Query: 109 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI-------PQKRLYGHSHFI 267
H G V +I P+ ++ + + +++W + N + + P L GH
Sbjct: 163 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNA 222
Query: 268 S-DVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 363
+ + + LSG DK++ LW + TT
Sbjct: 223 EFALAMCPTEPFVLSGGKDKSVVLWSIQDHITT 255
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 37.9 bits (84), Expect = 0.006
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR-DENNYGI-------PQKRLY-- 249
+ H G V Q+ +P + ++ SS D+ L+VW L R E I P + L+
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSH 359
Query: 250 -GHSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
GH ISD + + + + S + D +L++W +A ++ R E+ +D+
Sbjct: 360 GGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMA--ESIYRDEEDAEDI 407
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +1
Query: 76 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 255
++L + + H G V +A + ++ + S D+ L++W L + P + + H
Sbjct: 215 KSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASK--PVQSVVAH 272
Query: 256 SHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTT-RRFEDHTKDV 393
S ++ + + + + +GS DKT++L+DL T F+ H ++V
Sbjct: 273 SMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEV 320
Score = 33.9 bits (74), Expect = 0.095
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI------PQKRLY--- 249
T H V Q+ NPK ++ S + L+VW L+R + + P + L+
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHG 371
Query: 250 GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLA 348
GH+ ISD + ++ +S + D L++W +A
Sbjct: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/95 (27%), Positives = 40/95 (42%)
Frame = +1
Query: 115 GWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDG 294
G V Q+ M+ + + +++VWK T E++ L GH H G
Sbjct: 264 GVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGH-HSGEVTCFVVGG 322
Query: 295 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
SGS DKT+++WDL + + H V S
Sbjct: 323 EVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTS 357
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS*QP 423
L GH + I + L + S S D TL +WD +G+ R + +GSL+S P
Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAE---AGSLISEGP 239
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 37.5 bits (83), Expect = 0.008
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L GH +V +P M+++ S D T+ VW +N+ I + H + DVV
Sbjct: 174 LLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNW-IAE---INHGLPVEDVV 229
Query: 280 -LSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLS 399
L S G A +G ++++WDL GK E H K V S
Sbjct: 230 YLPSGGLIATAGG--NSVKVWDLIGGGKMVCSMESHNKTVTS 269
Score = 34.7 bits (76), Expect = 0.054
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVW----HLTNCKLKINH 635
GH D+V C SP + + ++V+ +D TVKVW H +N +INH
Sbjct: 176 GHKDYVRCGDCSPVN-DSMLVTGSYDHTVKVWDARVHTSNWIAEINH 221
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
H +S + L+ D SGSWDKTL++W L+ K E H
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAH 286
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 510 HSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCK 620
H D VSC+ S N ++ S WD T+KVW L++ K
Sbjct: 244 HFDAVSCL--SLNEDLGLLYSGSWDKTLKVWRLSDSK 278
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 336
++ S S DKTL VW+L+ + + + H ++ VV D + +GS D TL++
Sbjct: 259 LLYSGSWDKTLKVWRLSDSK-----CLESIEAHDDAVNTVVSGFD-DLVFTGSADGTLKV 312
Query: 337 W 339
W
Sbjct: 313 W 313
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 37.5 bits (83), Expect = 0.008
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +1
Query: 109 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 285
H V + NP D L+SS D T+ +W + R + + H++ + V +
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPAS-----VRTFKEHAYCVYQAVWNP 159
Query: 286 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
G+ S S D TLR+WD+ +T H ++LS
Sbjct: 160 KHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILS 197
Score = 35.1 bits (77), Expect = 0.041
Identities = 24/83 (28%), Positives = 37/83 (44%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
T + H V Q NPK+ D+ S+S D TL +W + + IP +S
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDF----EILSCD 199
Query: 277 VLSSDGNYALSGSWDKTLRLWDL 345
D + S DKT+++WD+
Sbjct: 200 WNKYDDCILATSSVDKTVKVWDV 222
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/87 (22%), Positives = 43/87 (49%)
Frame = +1
Query: 82 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 261
L+ + +++ H+ V IA + + + S D+ + VW E + + L H
Sbjct: 225 LRCKESIKAHDDAVNAIAVSTN--GTVYTGSADRRIRVWAKPTGEKRHTLVAT-LEKHKS 281
Query: 262 FISDVVLSSDGNYALSGSWDKTLRLWD 342
++ + L+ DG+ SGS D+++ +W+
Sbjct: 282 AVNALALNDDGSVLFSGSCDRSILVWE 308
Score = 35.9 bits (79), Expect = 0.024
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = +1
Query: 31 LQWSRRSSNHFQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 210
L W R ++++ + +RG LRGH+ + + D++LS S D+T+ +W+
Sbjct: 305 LVWEREDTSNY------MAVRGALRGHDKAILSLFN---VSDLLLSGSADRTVRIWRRGP 355
Query: 211 DENNYGIPQKRLYGHSHFISDVVL-----SSDGNYALSGSWDKTLRLWDLAAGKTTRRF 372
D ++Y + L GH+ + + D +SGS D ++ W ++ K F
Sbjct: 356 D-SSYSCLEV-LSGHTKPVKSLAAVREKELDDVVSIISGSLDGEVKCWKVSVTKPDNSF 412
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Frame = +1
Query: 235 QKRLY-GHSHFISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTRRFED 378
+KRL+ H+ ++ + +S DG + S SWDKTL++W DL ++ + +D
Sbjct: 187 KKRLWIEHADAVTALAVS-DG-FIYSVSWDKTLKIWRASDLRCKESIKAHDD 236
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 37.5 bits (83), Expect = 0.008
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +1
Query: 94 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 273
G LRGH + +A D++LS S DK+L VW+ E L GH+ +
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKS 378
Query: 274 VVLS---SDGN-----YALSGSWDKTLRLWDL 345
+ +S SD N SGS D +L++W+L
Sbjct: 379 LAVSVSDSDSNSDYSCMVYSGSLDLSLKVWNL 410
Score = 35.1 bits (77), Expect = 0.041
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS 414
H +S + LS DG+ S SWD++ ++W + K E D ++ ++S
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVS 244
Score = 30.7 bits (66), Expect = 0.88
Identities = 20/92 (21%), Positives = 45/92 (48%)
Frame = +1
Query: 67 KCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRL 246
KCL++++ + H+ + I + + + S DK + VW +D+ + + L
Sbjct: 225 KCLDSIE-----KAHDDAINAIVVSKD--GFVYTGSADKKIKVWN-KKDKKHSLVAT--L 274
Query: 247 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 342
H ++ + +S DG SG+ D+++ +W+
Sbjct: 275 TKHLSAVNALAISEDGKVLYSGACDRSILVWE 306
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 37.1 bits (82), Expect = 0.010
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +1
Query: 103 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 282
+GH V +A N + S S D+T +W + + L GH+ + +
Sbjct: 17 QGHKKKVHSVAWNSN-GTKLASGSVDQTARIWNI-EPHGHSKAKDLELKGHTDSVDQLCW 74
Query: 283 S-SDGNYALSGSWDKTLRLWDLAAGKTTRRFE 375
+ + S DK++RLWD +GK T++ E
Sbjct: 75 DPKHSDLVATASGDKSVRLWDARSGKCTQQVE 106
Score = 36.3 bits (80), Expect = 0.018
Identities = 23/90 (25%), Positives = 42/90 (46%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L+GH V Q+ +PK+ D++ ++S DK++ +W + Q L G + ++
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDA---RSGKCTQQVELSGEN---INIT 115
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRR 369
DG + G+ D L + D+ K R
Sbjct: 116 YKPDGTHVAVGNRDDELTILDVRKFKPLHR 145
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLR 333
++LSSS DKT+ +W + +L+ H+ +++ V + D +Y +SGS D +R
Sbjct: 532 LLLSSSMDKTVRLWDIETQSC------LKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIR 585
Query: 334 LWDLA 348
+W+++
Sbjct: 586 IWNIS 590
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/35 (31%), Positives = 24/35 (68%)
Frame = +3
Query: 510 HSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTN 614
H+D+V+CV+F+P + +S D +++W+++N
Sbjct: 558 HNDYVTCVQFNPLDED-YFISGSLDAKIRIWNISN 591
Score = 31.1 bits (67), Expect = 0.67
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Frame = +1
Query: 10 HVLPDLTLQWSRRS---SNHFQKCLET--LKLRGTLR--GHNGWVTQIATNPKYPDMILS 168
H+ L L WSR S+ K + ++ + L+ HN +VT + NP D +S
Sbjct: 518 HLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFAHNDYVTCVQFNPLDEDYFIS 577
Query: 169 SSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 339
S D + +W ++ N + L ++ V + DG A GS + RL+
Sbjct: 578 GSLDAKIRIWNIS---NRQVVEWNDL---KEMVTAVCYTPDGQAAFVGSINGHCRLY 628
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 214 ENNYGIPQKRLYGHSHFISDVV-LS-SDGNYALSGSWDKTLRLWDLAAGKTTRRF 372
E + + K + + + DV+ LS S LS S DKT+RLWD+ + F
Sbjct: 502 ETVFSLSDKPICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLF 556
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 37.1 bits (82), Expect = 0.010
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 336
M+ S+ DK ++W + P+ L H+ I+D+ S + S+DKT+R+
Sbjct: 665 MLASAGHDKKAVLWYTDTMK-----PKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 337 WDL-AAGKTTRRFEDHTKDVLS 399
WD G + R F H+ V S
Sbjct: 720 WDADNKGYSLRTFMGHSSMVTS 741
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS*QPSDS 432
H H ++ V LS D + S S D T+ WD+++GK+ ++ + +VL L Q S
Sbjct: 144 HQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKSD-EYKWPSDEVLKSHGLKFQES-- 200
Query: 433 VWFSRQDYXTLEHPWRSASIPSKMMDT-AIGCHV 531
W++R + +L + S + + T + CHV
Sbjct: 201 -WYTRHNKQSLA---LAVSSDGRYLATGGVDCHV 230
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = +1
Query: 109 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 288
H V + + ++ILS S D VW R P L GH ++ +
Sbjct: 270 HTSDVNTVCFADESGNLILSGSDDNLCKVWD-RRCFIGRDKPAGVLVGHLEGVTFIDSRG 328
Query: 289 DGNYALSGSWDKTLRLWDL 345
DG Y +S D+T++LWD+
Sbjct: 329 DGRYFISNGKDQTIKLWDI 347
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
G+S I V S+DG ++GS D ++ ++DL A + + R HT DV
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDV 274
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/60 (36%), Positives = 26/60 (43%)
Frame = +1
Query: 211 DENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 390
D N P GH +S V S+ A S S D TLRLWD+ R F HT +
Sbjct: 534 DLRNISQPLHVFSGHKKAVSYVKFLSNNELA-SASTDSTLRLWDVKDNLPVRTFRGHTNE 592
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 37.1 bits (82), Expect = 0.010
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ---KRLYGHSHFIS 270
L GH V + +P D++ S S D T+ VW D+ Y Q + GHS +
Sbjct: 159 LTGHTQDVKMVQWHPTM-DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVW 217
Query: 271 DVVLSSDGNYALSGSWDKTLRLW 339
+ ++ G+ ++ S D TL++W
Sbjct: 218 SISFNAAGDKMVTCSDDLTLKIW 240
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Frame = +3
Query: 504 DGHSDWVSCVRFSP--NHAN---PIIVSCGWDXTVKVW 602
+GH+D V V ++P +HA+ PI+ SC D TV++W
Sbjct: 17 EGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIW 54
Score = 30.7 bits (66), Expect = 0.88
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 498 QDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHL 608
++ H + V+ V++SP N ++ S D VK+W L
Sbjct: 312 KNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQL 348
Score = 30.3 bits (65), Expect = 1.2
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Frame = +1
Query: 109 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQK---RLYGHSHFISDVV 279
H V A +P ++ ++S D T +WK NYG + L GH + + V
Sbjct: 73 HTRTVRSCAWSPS-GQLLATASFDGTTGIWK------NYGSEFECISTLEGHENEVKSVS 125
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGK---TTRRFEDHTKDVLSGSLLS*QPSDSVWFSRQ 450
++ G+ + S DK++ +W++ G HT+DV ++ P+ V FS
Sbjct: 126 WNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDV---KMVQWHPTMDVLFSCS 182
Query: 451 DYXTLEHPW 477
T++ W
Sbjct: 183 YDNTIKVWW 191
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVW 602
GH+ V V++ P ++ SC +D T+KVW
Sbjct: 161 GHTQDVKMVQWHPTM--DVLFSCSYDNTIKVW 190
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 480 ECKYTI--QDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLK 626
+C T+ ++GHS V + F N A +V+C D T+K+W K++
Sbjct: 200 QCVQTLGESNNGHSSTVWSISF--NAAGDKMVTCSDDLTLKIWGTDIAKMQ 248
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 366
GHS ++ VV S + L+GS D T R+WD GK +
Sbjct: 199 GHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVK 237
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 36.7 bits (81), Expect = 0.013
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Frame = +1
Query: 79 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ-KRLYGH 255
T KL GH VT + + +++S S+D ++ VW L R +++ Q LY H
Sbjct: 109 TGKLLKKWHGHYRSVTCLVFSGD-DSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEH 167
Query: 256 S---HFIS--DVVLSSDGNYA--LSGSWDKTLRLWDLAAGK 357
+ H +S D+V+ G A +S S D+T ++W L+ GK
Sbjct: 168 NFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGK 208
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +1
Query: 265 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
I + +++G Y + G + LW++A GK +++ H + V
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSV 123
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +1
Query: 232 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 339
P + LYGH+ + D+ S D N LS S DKT+RLW
Sbjct: 264 PFQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLW 298
Score = 36.3 bits (80), Expect = 0.018
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L GH G V +A + +++LS+S+DKT+ +W+ D+ + ++ H+++++ V
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQCLH------VFHHNNYVTCVE 319
Query: 280 LS--SDGNYALSGSWDKTLRLWDLA 348
+ + N+A SGS D R+W L+
Sbjct: 320 FNPVNKNNFA-SGSIDGKARIWGLS 343
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 36.3 bits (80), Expect = 0.018
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 21/122 (17%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPK--YPDMILSSSRDKTLIVWKL---------------TRDENNYG 228
LRGH G VT IA +P+ P +LSSS D T +W + D N G
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQFAPRIYVPRPPSPDGKNSG 384
Query: 229 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL-AAGKTTR---RFEDHTKDVL 396
P SH I ++ G+ ++GS D R++ + +A KT +H DVL
Sbjct: 385 -PSSSNAQQSHQIFCCAFNASGSVFVTGSSDTLARVYSVWSANKTNTDDPEQPNHEMDVL 443
Query: 397 SG 402
+G
Sbjct: 444 AG 445
Score = 35.9 bits (79), Expect = 0.024
Identities = 27/95 (28%), Positives = 43/95 (45%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
LRGH V A + +++ S D+ + VW + + Y + R GH I+D+
Sbjct: 241 LRGHRNAV-YCAILDRSGRYVITGSDDRLVKVWSM---DTAYCLASCR--GHEGDITDLA 294
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 384
+SS+ + S S D +R+W L G HT
Sbjct: 295 VSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHT 329
Score = 35.1 bits (77), Expect = 0.041
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 238 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
KRL GH + + +L G Y ++GS D+ +++W + H D+
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDI 290
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 386 RMYSRVAFSVDNRQIVSGSRDKTIXLWNTLGGVQVY 493
R + +A+S+DNR +++ D I +WN G V+
Sbjct: 545 RGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVH 580
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 73 LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 204
+E K G L GH G V + ++P D+++S SRD +W L
Sbjct: 157 VEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +1
Query: 205 TRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 384
T EN + H + I D+ + L+ S D+T+++WD+ K T HT
Sbjct: 111 THQENTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHT 170
Query: 385 KDVLS 399
V S
Sbjct: 171 GTVKS 175
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRL 336
+L++S D+T+ VW + ++ G+ L GH+ + + ++ + +SGS D L
Sbjct: 143 LLTASGDQTIKVWDVEENKCT-GV----LIGHTGTVKSMCSHPTNSDLLVSGSRDGCFAL 197
Query: 337 WDLAAGKTTRRFE 375
WDL ++ + E
Sbjct: 198 WDLRCKSSSHKEE 210
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 36.3 bits (80), Expect = 0.018
Identities = 17/78 (21%), Positives = 37/78 (47%)
Frame = +1
Query: 121 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 300
++ ++ +P+ D+++++S D + W+++R + K H + DG
Sbjct: 28 ISSLSFSPR-ADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTT 86
Query: 301 ALSGSWDKTLRLWDLAAG 354
SG DK ++W L +G
Sbjct: 87 VFSGGCDKQAKMWPLLSG 104
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 295 NYALSGSWDKTLRLWD 342
N +GSWDKTL+ WD
Sbjct: 127 NLLATGSWDKTLKYWD 142
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 35.9 bits (79), Expect = 0.024
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDV 393
GH+ + + S GN SG D + +WD LA+ K TR RFE+HT V
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAV 303
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 35.9 bits (79), Expect = 0.024
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRL 336
+LSSS DKT+ +W L+ +++ HS +++ + + D Y +SGS D +R+
Sbjct: 527 LLSSSMDKTVRLWNLSSQ------TCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRV 580
Query: 337 WDL 345
W +
Sbjct: 581 WSI 583
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +1
Query: 181 KTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV--LSSDGNYALSGSWDKTLRLWDLAA 351
K+L + + ++ +G+ +K + DV+ S + LS S DKT+RLW+L++
Sbjct: 485 KSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKSQHLLSSSMDKTVRLWNLSS 543
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 510 HSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHL 608
HSD+V+C++F+P + +S D V+VW +
Sbjct: 552 HSDYVTCIQFNPVD-DRYFISGSLDAKVRVWSI 583
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 35.5 bits (78), Expect = 0.031
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 510 HSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCK 620
H+D VSC+ S N ++ S WD T+KVW + + K
Sbjct: 205 HADAVSCL--SLNDEQGLLYSASWDRTIKVWRIADSK 239
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
H+ +S + L+ + S SWD+T+++W +A K H V S
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNS 253
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 336
++ S+S D+T+ VW++ + IP H ++ VV +++ SGS D T++
Sbjct: 220 LLYSASWDRTIKVWRIADSKCLESIP-----AHDDAVNSVVSTTEA-IVFSGSADGTVKA 273
Query: 337 W 339
W
Sbjct: 274 W 274
Score = 28.7 bits (61), Expect = 3.6
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Frame = +1
Query: 82 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 261
L G L+GH V + ++ S S DKT+ VWK RD N + L GH+
Sbjct: 328 LNYGGILKGHKLAVLCLEVAGS---LVFSGSADKTICVWK--RDGNIHTC-LSVLTGHTG 381
Query: 262 FISDVVLSSDGN---------YALSGSWDKTLRLWDLA 348
+ + + +D SGS DK++++W ++
Sbjct: 382 PVKCLAVEADREASERRDKKWIVYSGSLDKSVKVWGVS 419
Score = 27.5 bits (58), Expect = 8.2
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +1
Query: 88 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 267
L TL VT +A + + SS D + W+ + N GI L GH +
Sbjct: 287 LMQTLTKQESAVTALAVSKNGAAVYFGSS-DGLVNFWEREKQLNYGGI----LKGHK--L 339
Query: 268 SDVVLSSDGNYALSGSWDKTLRLW 339
+ + L G+ SGS DKT+ +W
Sbjct: 340 AVLCLEVAGSLVFSGSADKTICVW 363
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 35.5 bits (78), Expect = 0.031
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 7/168 (4%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRD--ENNYGIPQKRLYGHSHFISDVVLSSDGN----YALSGSWD 321
ILS+ RD + V + E + I Q GHS FI+ S Y +SGS D
Sbjct: 170 ILSADRDFKIRVTVFPKKPLEGAHEI-QSFCLGHSEFITCTAFVSTPELTQGYLMSGSGD 228
Query: 322 KTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS*QPSDSVWFSRQDYXTLEHPWRSA-SIPS 498
T+RLWD+ +G E T ++G S + + D + + +A +I S
Sbjct: 229 STVRLWDITSGSLLDTCEVST---VAGHAESNENESPTQVTVTDICAIPNSSLAAVAIQS 285
Query: 499 KMMDTAIGCHVSDSHPIMPTPLLYPVVGTXLSRSGISLTVSSRLTIWV 642
+ C ++ +H + T ++ + G + I+++ SSRL +W+
Sbjct: 286 FQGIFLLSCDLT-AHTLSITKVI-KIPGESFIPTSIAVSASSRL-LWM 330
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 35.1 bits (77), Expect = 0.041
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 73 LETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 198
L+ K L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 472 LKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 390
H ++ LS G LSGS DKT+R+W + GK TKD
Sbjct: 894 HKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLECAEVIKTKD 939
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 35.1 bits (77), Expect = 0.041
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 510 HSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCK 620
HSD VSC+ + + ++ S WD TVKVW + + K
Sbjct: 134 HSDAVSCLSLAEDQG--LLYSASWDRTVKVWRIHDLK 168
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTRRFEDHTKDVLSGSLL 411
HS +S + L+ D S SWD+T+++W DL ++ + +D V + L
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAESL 189
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 34.7 bits (76), Expect = 0.054
Identities = 27/99 (27%), Positives = 45/99 (45%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
T+ GH V +A + ++ S SRDK+++ + E++ +L GH I +
Sbjct: 246 TMEGHRLRVGALAWSSS---VLSSGSRDKSILQRDIRTQEDHVS----KLKGHKSEICGL 298
Query: 277 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
SSD SG D L +W+ + + RF +H V
Sbjct: 299 KWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAV 337
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
L GHS+ + + +S DG ++G+ D+TLR W++
Sbjct: 418 LTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 407 FSVDNRQIVSGSRDKTIXLWN 469
+S DNR++ SG D + +WN
Sbjct: 300 WSSDNRELASGGNDNKLFVWN 320
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 34.7 bits (76), Expect = 0.054
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
H +S + L+ + SGSWDKTL++W L+ K + H
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAH 290
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 510 HSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCK 620
H D VSC+ S N ++ S WD T+KVW L++ K
Sbjct: 248 HYDAVSCL--SLNEELGLLYSGSWDKTLKVWRLSDSK 282
Score = 31.5 bits (68), Expect = 0.51
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 336
++ S S DKTL VW+L+ + + + H I+ V D + +GS D TL++
Sbjct: 263 LLYSGSWDKTLKVWRLSDSK-----CLESIQAHDDAINTVAAGFD-DLLFTGSADGTLKV 316
Query: 337 WDL-AAGKTTRRF 372
W GK T+ F
Sbjct: 317 WKRELQGKGTKHF 329
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 34.7 bits (76), Expect = 0.054
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 241 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 363
R H ++ + ++DG Y LS D +RLWD+ +G+ T
Sbjct: 307 RATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNT 347
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 241 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 366
RL+GH I+ + L D SGSWD ++R+WD ++ K +
Sbjct: 252 RLWGHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVK 291
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 354
LYGH+ + V L + + +D +R+WD+ G
Sbjct: 158 LYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEG 194
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 34.3 bits (75), Expect = 0.072
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 295 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
N SGS DK +++WD+A GK E H K V
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKV 260
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.072
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 88 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 237
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.072
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 88 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 237
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 97 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 201
TL GH G V Q+A +PK+ ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWK 86
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.9 bits (74), Expect = 0.095
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 97 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 201
TL GH G V ++A +PKY ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWK 86
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 33.9 bits (74), Expect = 0.095
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 339
+ + S D T+ W L +D G + GH +S +V+ + Y SGSWD T+RLW
Sbjct: 600 VYTGSGDNTIKAWSL-QD----GSLLCTMSGHKSVVSTLVVVNGVLY--SGSWDGTVRLW 652
Query: 340 DLA 348
L+
Sbjct: 653 SLS 655
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +1
Query: 160 ILSSSRDKTLIVWKLTRDENNYGIP--QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 333
+ S DK +W ++G+ + R HS + +SSDG Y +G D+ +
Sbjct: 190 VSSGKTDK--YIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVH 247
Query: 334 LWDLAAGKTTRRFEDHTKDV 393
+WD+ + + F H V
Sbjct: 248 IWDVRTREHVQAFPGHRNTV 267
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 366
H + V LS D + S S D T+ WD+++GKT +
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDK 197
Score = 31.1 bits (67), Expect = 0.67
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGHSG 650
GH + VSC+ F + + S +D TVKVW++ + + GH G
Sbjct: 262 GHRNTVSCLCF--RYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQG 307
Score = 28.3 bits (60), Expect = 4.7
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENN-YGIPQKRLYGHSHFISDVVL 282
GH G + I K + L+ RD+T++ K+ Y P L FISD
Sbjct: 304 GHQGEILAIDALRK--ERALTVGRDRTMLYHKVPESTRMIYRAPASSLESCC-FISD--- 357
Query: 283 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSG 402
N LSGS + T+ LW + K F++ +D+ G
Sbjct: 358 ----NEYLSGSDNGTVALWGMLKKKPVFVFKNAHQDIPDG 393
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 510 HSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCK 620
H+D +SC+ HA II S WD T+KVW L++ K
Sbjct: 173 HADSISCLAV---HAG-IIYSGSWDKTLKVWRLSDLK 205
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 238 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSG 402
KRL+ H S L+ SGSWDKTL++W L+ K + H D ++G
Sbjct: 167 KRLW-IEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAH-DDAING 219
Score = 27.5 bits (58), Expect = 8.2
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +1
Query: 76 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 255
E +L RGHN V + +M+ S S DK++ +W+ R+ ++GH
Sbjct: 306 EEWRLGFETRGHNMAVLCMCV---VGEMVCSGSADKSIGLWR--REVTGMLCKFGVIHGH 360
Query: 256 SHFISDVVLSSD----GNYALSGSWDKTLRLW 339
+ + S + G SG DK+LR+W
Sbjct: 361 EGPVKCLQASPNNVGAGFMLYSGGLDKSLRVW 392
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 247 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 366
+GH ++ + LS D N+ ++GS D T+ LW + T+R
Sbjct: 2665 FGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSR 2704
Score = 30.7 bits (66), Expect = 0.88
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 401 VAFSVDNRQIVSGSRDKTIXLW 466
+A S DN +V+GSRD T+ LW
Sbjct: 2674 LALSPDNNFLVTGSRDSTVLLW 2695
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 198
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.17
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 198
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 507 GHSDWVSCVRFSP-NHANPIIVSCGWDXTVKVWHLTNC 617
GH+ VSCV FS ++S G D TVK+W C
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKC 283
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 250 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 342
GH+ +S V S G + +SG DKT+++WD
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 507 GHSDWVSCVRFSP-NHANPIIVSCGWDXTVKVWHLTNC 617
GH+ VSCV FS ++S G D TVK+W C
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKC 309
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 250 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 342
GH+ +S V S G + +SG DKT+++WD
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 238 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSGSLL 411
K+L H ++ V +++G+ +SGS D+ + LWD G F H +V +
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFM 111
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 32.7 bits (71), Expect = 0.22
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = +1
Query: 127 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL 306
++ T P + M+ SS K + ++ R+ N+ + K H+ +S + L +
Sbjct: 200 RVGTLPTFKSMVKSSVNPKHFM--EVRRNRNS--VKTK----HNDAVSSLSLDVELGLLY 251
Query: 307 SGSWDKTLRLWDLAAGK---TTRRFEDHTKDVLSG 402
S SWD T+++W +A K + +D V+SG
Sbjct: 252 SSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSG 286
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 510 HSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCK 620
H+D VS + ++ S WD T+KVW + + K
Sbjct: 234 HNDAVSSLSLDVELG--LLYSSSWDTTIKVWRIADSK 268
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 226 GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 342
G+ L H ++D+ SSD ++ +S S D T+++WD
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 336
M++ S+++ + +W D + + + G ++S +V S GN+ +SGS L L
Sbjct: 1203 MVMYSTQNCGIHLWDTRSDLDAWTLKANPEEG---YVSSLVTSPCGNWFVSGSSRGVLTL 1259
Query: 337 WDL 345
WDL
Sbjct: 1260 WDL 1262
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 295 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
N S S DK +++WD+A G E HTK+V
Sbjct: 279 NILASASADKKVKVWDVATGTCKITMEHHTKEV 311
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 32.7 bits (71), Expect = 0.22
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 357
GH+ ++ + S G + SGS D ++R+W++ G+
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 32.3 bits (70), Expect = 0.29
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 285
GH+G + I+ + + +LS+S D ++ +W++ E+ GI + H+++++ V +
Sbjct: 354 GHSGDILDISWSKN--NRLLSASVDNSVRLWQIGC-EDCLGI-----FSHNNYVTSVQFN 405
Query: 286 S-DGNYALSGSWDKTLRLW 339
D ++ +SGS D +R+W
Sbjct: 406 PVDDDHFISGSIDGKVRIW 424
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 109 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 210
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 404 AFSVDNRQIVSGSRDKTIXLWNTLG 478
+F+ D + IVS D ++ +WN +G
Sbjct: 542 SFTADGKHIVSACDDSSVYVWNCVG 566
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 32.3 bits (70), Expect = 0.29
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 285
GH+G + I+ + + +LS+S D ++ +W++ E+ GI + H+++++ V +
Sbjct: 354 GHSGDILDISWSKN--NRLLSASVDNSVRLWQIGC-EDCLGI-----FSHNNYVTSVQFN 405
Query: 286 S-DGNYALSGSWDKTLRLW 339
D ++ +SGS D +R+W
Sbjct: 406 PVDDDHFISGSIDGKVRIW 424
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 109 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 210
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 404 AFSVDNRQIVSGSRDKTIXLWNTLG 478
+F+ D + IVS D ++ +WN +G
Sbjct: 538 SFTADGKHIVSACDDSSVYVWNCVG 562
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 232 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 390
P L GH+ +S V G +G+ D L+LW + G+ R +E H +
Sbjct: 105 PALTLQGHTKTVSYVRFLDGGTVVTAGT-DGCLKLWSVEDGRVIRTYEGHVNN 156
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 32.3 bits (70), Expect = 0.29
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 103 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 210
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 372
H +++ +V + + + +S S DKTLR+WDL T + F
Sbjct: 453 HDGYVTKLV-APESHLLVSSSLDKTLRIWDLRKSWTPQPF 491
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 238 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSGSLL 411
K+L H ++ V ++DG+ LSGS D+ + LWD F+ H ++ +
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFM 107
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.3 bits (70), Expect = 0.29
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 204
+L GH V +I T P P +++++S+D+++ +W +
Sbjct: 123 SLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 271 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
+ + DG Y LSGS D TL W++ R+E++
Sbjct: 249 EATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENN 285
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 148 YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY-GHSHFISDVVLSSDGNYALSGSWDK 324
+P ++ SSR + R + Y R + GH + + +S + +SGS D+
Sbjct: 77 HPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDR 136
Query: 325 TLRLWDL 345
++RLWDL
Sbjct: 137 SVRLWDL 143
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 407 FSVDNRQIVSGSRDKTIXLWNTLGGVQVYHPR*WTQRLGVM 529
F+ D + ++SGS D T+ WN +V W +GV+
Sbjct: 252 FTPDGKYVLSGSGDGTLHAWNIENPSEVAR---WENNIGVV 289
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 31.9 bits (69), Expect = 0.38
Identities = 24/99 (24%), Positives = 44/99 (44%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
T+ GH V +A ++ S SRDK+++ + E++ +L GH + +
Sbjct: 289 TMEGHRLRVGALAWGSS---VLSSGSRDKSILQRDIRCQEDHVS----KLAGHKSEVCGL 341
Query: 277 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
S D SG D L +W+ + + ++ +HT V
Sbjct: 342 KWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAV 380
Score = 31.9 bits (69), Expect = 0.38
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
L GH++ + + +S DG ++G+ D+TLR W++
Sbjct: 461 LTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 27.9 bits (59), Expect = 6.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 407 FSVDNRQIVSGSRDKTIXLWN 469
+S DNR++ SG D + +WN
Sbjct: 343 WSYDNRELASGGNDNRLFVWN 363
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.9 bits (69), Expect = 0.38
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 477 AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKL 623
++ + ++ D H V+ + F+ + +V+CG D +KVW L+ KL
Sbjct: 441 SDLRQHLEIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIKVWDLSGKKL 489
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 495 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVW 602
++ D H+ V+ + FS + +V+CG D T+KVW
Sbjct: 458 LEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVW 493
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 319 DKTLRLWDLAAGKTTRRFEDHTKDVLS 399
DKT+++WD G FE H V S
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYS 513
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 495 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVW 602
++ D H+ V+ + FS + +V+CG D T+KVW
Sbjct: 458 LEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVW 493
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 319 DKTLRLWDLAAGKTTRRFEDHTKDVLS 399
DKT+++WD G FE H V S
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYS 513
>At5g62620.1 68418.m07859 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 681
Score = 31.5 bits (68), Expect = 0.51
Identities = 27/88 (30%), Positives = 40/88 (45%)
Frame = +1
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS*QPSDSVWFSRQDYX 459
+S DG + S + L D A G T D V +GSL + PS FS Q +
Sbjct: 363 VSVDGKHVTSFPYRTGFTLED-ATGLTINGDID-VHSVFAGSLPTSHPS----FSPQRHL 416
Query: 460 TLEHPWRSASIPSKMMDTAIGCHVSDSH 543
L W++ S+P + +D IG + +H
Sbjct: 417 ELSSNWQAPSLPDEQVDMFIGILSAGNH 444
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDV 393
GH+ + + S G SG D + +WD LA+ TR RFE+HT V
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAV 287
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 229 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 369
+ L GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 363 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 411
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 304 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS*QPSDSVW 438
+SGS D T+R+WDL +G H V +LS P+ W
Sbjct: 553 ISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQ-IILSPAPTKRPW 596
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 31.5 bits (68), Expect = 0.51
Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Frame = +1
Query: 88 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKR----LY 249
L+G+ G ++ I+ N K ++ S+S + T ++W L + + N+ +R L
Sbjct: 164 LKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQ 223
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSGSLLS*QPS 426
+ + + ++++SD + + TL+LWD+ R F H + V++ + PS
Sbjct: 224 WNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQRGVIA---MEWCPS 274
Query: 427 DS 432
DS
Sbjct: 275 DS 276
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 31.5 bits (68), Expect = 0.51
Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Frame = +1
Query: 88 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKR----LY 249
L+G+ G ++ I+ N K ++ S+S + T ++W L + + N+ +R L
Sbjct: 164 LKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQ 223
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSGSLLS*QPS 426
+ + + ++++SD + + TL+LWD+ R F H + V++ + PS
Sbjct: 224 WNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQRGVIA---MEWCPS 274
Query: 427 DS 432
DS
Sbjct: 275 DS 276
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 241 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 363
R H ++ + ++DG Y LS +RLWD+ +G+ T
Sbjct: 307 RATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNT 347
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 495 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVW 602
++ D H V+ + FS + +++CG D T+KVW
Sbjct: 456 LEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVW 491
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 319 DKTLRLWDLAAGKTTRRFEDHTKDVLS 399
DKT+++WD A G FE H V S
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYS 511
Score = 27.9 bits (59), Expect = 6.2
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +1
Query: 79 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 258
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 865 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 919
Query: 259 HFISDVVLSSDGNYALSGSWDKTLRLWD 342
I+ + S+ N +S D L +W+
Sbjct: 920 KRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 495 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVW 602
++ D H V+ + FS + +++CG D T+KVW
Sbjct: 456 LEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVW 491
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 319 DKTLRLWDLAAGKTTRRFEDHTKDVLS 399
DKT+++WD A G FE H V S
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYS 511
Score = 27.9 bits (59), Expect = 6.2
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +1
Query: 79 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 258
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 865 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 919
Query: 259 HFISDVVLSSDGNYALSGSWDKTLRLWD 342
I+ + S+ N +S D L +W+
Sbjct: 920 KRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 31.1 bits (67), Expect = 0.67
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 139 NPKYPDMILSSSRDKTLIVW---KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS 309
NP P+++LS D +W KL + + + KR+ ++F S G L+
Sbjct: 321 NPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYF-----SPSSGTKILT 375
Query: 310 GSWDKTLRLWDLAAG 354
D +R+WD G
Sbjct: 376 TCQDNRIRIWDSIFG 390
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 31.1 bits (67), Expect = 0.67
Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 6/108 (5%)
Frame = +1
Query: 91 RGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS 270
RG GH V +A P S D L++W + +K H +
Sbjct: 274 RGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVD 333
Query: 271 DVVLSSDGNYALSGSWDKTLRLWDL------AAGKTTRRFEDHTKDVL 396
D N L+GS D T+R++D G +FE H VL
Sbjct: 334 --WNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVL 379
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Frame = +1
Query: 109 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY---GIPQKR----LYGHSHFI 267
H G V +I P+ ++ + + +++W + Y G P R L GH
Sbjct: 152 HPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDA 211
Query: 268 S-DVVLSSDGNYALSGSWDKTLRLWDL 345
+ + + LSG DK++ LW++
Sbjct: 212 EFALAMCPTEPFVLSGGKDKSVILWNI 238
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 31.1 bits (67), Expect = 0.67
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 295 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 387
NY S +D ++LWD+ G+ F +H K
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEK 797
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 265 ISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDV 393
+ ++V S +G Y L+ S D+T+R+++ L A + ED K++
Sbjct: 219 VKNIVFSRNGQYLLTNSHDRTIRIYENLLPAKNVLKSLEDLGKNI 263
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); phytochrome
A supressor spa1 (GI:4809171) [Arabidopsis thaliana]
Length = 837
Score = 31.1 bits (67), Expect = 0.67
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFI 267
T+ GH+ V+ + K+ D ++SSS D TL +W L+ + P GH++
Sbjct: 699 TMIGHSKTVSYV----KFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLK 754
Query: 268 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSG 402
+ V LS Y +GS + ++ A + + D +SG
Sbjct: 755 NFVGLSVSDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSG 799
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/75 (24%), Positives = 32/75 (42%)
Frame = +1
Query: 202 LTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 381
+ D + P L G S S S + S ++D +++WD+A + ++H
Sbjct: 566 IVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEH 625
Query: 382 TKDVLSGSLLS*QPS 426
K V S + S P+
Sbjct: 626 KKRVWSIDISSADPT 640
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 495 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGH 644
++ D H V+ + FS + + +CG D T+KVW + GH
Sbjct: 456 LEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGH 505
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 319 DKTLRLWDLAAGKTTRRFEDHTKDVLS 399
DKT+++WD A G FE H V S
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYS 511
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 401 VAFSVDNRQ--IVSGSRDKTIXLWNTLGGVQVY 493
+AFS N+Q + + DKTI +W+ GV+ Y
Sbjct: 468 IAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRY 500
Score = 27.9 bits (59), Expect = 6.2
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +1
Query: 79 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 258
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 854 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 908
Query: 259 HFISDVVLSSDGNYALSGSWDKTLRLWD 342
I+ + S+ N +S D L +W+
Sbjct: 909 KRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 495 IQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHLGH 644
++ D H V+ + FS + + +CG D T+KVW + GH
Sbjct: 456 LEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGH 505
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 319 DKTLRLWDLAAGKTTRRFEDHTKDVLS 399
DKT+++WD A G FE H V S
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYS 511
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 401 VAFSVDNRQ--IVSGSRDKTIXLWNTLGGVQVY 493
+AFS N+Q + + DKTI +W+ GV+ Y
Sbjct: 468 IAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRY 500
Score = 27.9 bits (59), Expect = 6.2
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +1
Query: 79 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 258
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 854 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 908
Query: 259 HFISDVVLSSDGNYALSGSWDKTLRLWD 342
I+ + S+ N +S D L +W+
Sbjct: 909 KRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1
Query: 199 KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 369
K+ R + N G + L H + V S ++GSWDKT++ WD T R
Sbjct: 79 KVRRIDFNAG-KEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTER 134
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 265 ISDVVLSSDGNYALSGSWDKTLRLWD 342
IS++ S++ ++ L SWDK++RL+D
Sbjct: 19 ISNLRFSNNSDHLLVSSWDKSVRLYD 44
>At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 500
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 265 ISDVVLSSDGNYALSGSWDKTLRLWDL 345
ISD+ S DG Y LS + TL+LWD+
Sbjct: 332 ISDIKFSKDGRYILSRDY-MTLKLWDI 357
>At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 501
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 265 ISDVVLSSDGNYALSGSWDKTLRLWDL 345
ISD+ S DG Y LS + TL+LWD+
Sbjct: 333 ISDIKFSKDGRYILSRDY-MTLKLWDI 358
>At1g17630.1 68414.m02181 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 731
Score = 31.1 bits (67), Expect = 0.67
Identities = 12/80 (15%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +2
Query: 245 YTVIRTSFLMLCCLVTVITPFPVLGTRLCVCGISLQARLPDD---SRTILRMYSRVAFSV 415
++ + + + +CC++++ P L + G ++ + ++ ++ MY++
Sbjct: 427 FSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLS 486
Query: 416 DNRQIVSGSRDKTIXLWNTL 475
+ + RDK + WN++
Sbjct: 487 EGSLVFEAIRDKDLISWNSI 506
>At5g55740.1 68418.m06948 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 830
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 377 TILRMYSRVAFSVDNRQIVSGSRDKTIXLWNTL 475
T++ MY++ VD +++ + +K + LWNTL
Sbjct: 415 TVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTL 447
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 244 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
L GHS + + S DG ++G+ D+TLR W++
Sbjct: 424 LTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 401 VAFSVDNRQIVSGSRDKTIXLWNTLGGVQVYHP 499
+A S D + IV+G+ D+T+ WN V++ P
Sbjct: 434 LATSPDGQTIVTGAGDETLRFWNVFPSVKMQTP 466
Score = 28.7 bits (61), Expect = 3.6
Identities = 23/99 (23%), Positives = 45/99 (45%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 276
T+ GH +A N + ++ S SRD+ ++ + R ++++ +L GH + +
Sbjct: 252 TMGGHQTRTGVLAWNSR---ILSSGSRDRNILQHDI-RVQSDF---VSKLVGHKSEVCGL 304
Query: 277 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 393
S D SG D L +W+ + + + +HT V
Sbjct: 305 KWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAV 343
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 232 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 342
P L GH H + DV + +GS D LR+WD
Sbjct: 9 PVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWD 45
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 241 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
RL GH I +V S DG+ +S S D++ R+W++
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEI 264
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 241 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
RL GH I +V S DG+ +S S D++ R+W++
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEI 264
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 241 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG 354
+L GH ++ V +S G+ +SGS D+ + LW+ +G
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSG 87
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 401 VAFSVDNRQIVSGSRDKTIXLWNTLGG 481
V F+ +VSGS D+ I LWN L G
Sbjct: 61 VEFNSTGDVLVSGSDDRQIMLWNWLSG 87
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 30.7 bits (66), Expect = 0.88
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 369
H +S V +++D +GS+D T+ +WD+ +T +
Sbjct: 1045 HKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPEK 1083
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 148 YPDMILSSSR---DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 318
+P ++ SSR D +L + L+ +N Y + GH + + L S G +SGS
Sbjct: 86 HPTTVIYSSRNGWDDSLRL--LSLHDNKY---LRYFKGHHDRVVSLSLCSGGECFISGSL 140
Query: 319 DKTLRLWD 342
D+T+ LWD
Sbjct: 141 DRTVLLWD 148
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 298 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS 414
Y+ WD +LRL L K R F+ H V+S SL S
Sbjct: 92 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCS 130
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 148 YPDMILSSSR---DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 318
+P ++ SSR D +L + L+ +N Y + GH + + L S G +SGS
Sbjct: 83 HPTTVIYSSRNGWDDSLRL--LSLHDNKY---LRYFKGHHDRVVSLSLCSGGECFISGSL 137
Query: 319 DKTLRLWD 342
D+T+ LWD
Sbjct: 138 DRTVLLWD 145
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 298 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS 414
Y+ WD +LRL L K R F+ H V+S SL S
Sbjct: 89 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCS 127
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 235 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDV 393
++ L GH ++ + +S+G+ +SGS D + +W+ ++ K + HT ++
Sbjct: 43 EQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANI 96
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 88 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 252
LR RGH+ VT +A + ++ S S D + VWK++ E + G Q ++ G
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQITG 265
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 265 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 372
IS++ S++ ++ L SWDK +RL+D++ F
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEF 55
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWD 342
H + V S ++GSWDKT++ WD
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 29.9 bits (64), Expect = 1.5
Identities = 26/92 (28%), Positives = 39/92 (42%)
Frame = +1
Query: 85 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 264
K + R H+ +V I +P I SS K +I T D+ + GH
Sbjct: 42 KFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASED---GHKGS 98
Query: 265 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKT 360
I V S D L+ S DK+ ++W++A T
Sbjct: 99 IYAVSWSPDSKRVLTVSADKSAKVWEVAEDGT 130
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +1
Query: 100 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 204
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 205 TRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 339
+++ N+ + QK GH ++DV + G Y LS S D+T R++
Sbjct: 399 SKESENWQM-QKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVF 442
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 85 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 213
KL + H + + NP + +SSRDKT+ +W + D
Sbjct: 687 KLMAKVEAHKRIIWACSWNP-FGHQFATSSRDKTVKIWSVEND 728
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 483 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTNCKLKINHL 638
C + + WV VRF P+H+ I+ S D V++W+ T + +HL
Sbjct: 140 CLKVLTGHRRTPWV--VRFHPHHSE-IVASGSLDLEVRLWNTTTSECIRSHL 188
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTR----RFEDHTKDV 393
GH+ + + S G SG D + +WD +A+ TR RFE+HT V
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAV 270
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +1
Query: 229 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 369
+ L GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 346 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 394
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 486 KYTIQDDGHSDWVSCVRFSPNHANPIIVS 572
K+ + HS++V+CVRF+P+ + I VS
Sbjct: 178 KFKLSSREHSNFVNCVRFAPDGSKFITVS 206
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA 348
GH I V S DG L+ S DK+ ++WD++
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDIS 262
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 250 GHSHFISDV-VLSSDGNYALSGSWDKTLRLWDLAAG 354
GH +S + VL + +Y LSGS+D + W L G
Sbjct: 322 GHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRG 357
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 501 DDGHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLTN 614
DDGH + V +SP+ + VS D + K+W +++
Sbjct: 228 DDGHKGSIYAVSWSPDGKQVLTVSA--DKSAKIWDISD 263
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = +1
Query: 166 SSSRD-KTLIVWKLTRDENNYGIPQKR-----LYGHSHFISDVVLSS-DGNYALSGSWDK 324
S SRD K L+ L+ + +PQ L GH ++DVV SS D + S D+
Sbjct: 70 SLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDR 129
Query: 325 TLRLW 339
T ++W
Sbjct: 130 TEKIW 134
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 298 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 399
+ S +D R+WDL + F+ H K VLS
Sbjct: 144 FKASSGFDSLARVWDLRTARNILIFQGHIKQVLS 177
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/64 (35%), Positives = 27/64 (42%)
Frame = +1
Query: 166 SSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
SS D VW L R N I Q GH + V S +G + SG D R+WDL
Sbjct: 147 SSGFDSLARVWDL-RTARNILIFQ----GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDL 201
Query: 346 AAGK 357
K
Sbjct: 202 RMRK 205
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 29.5 bits (63), Expect = 2.0
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
GH+ V +A +P PD ++S+S+D + L E I GH +
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPM---LRNGETGDWIGT--FEGHKGAVWSCS 63
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 375
L + A S S D T ++W+ G FE
Sbjct: 64 LDKNAIRAASASADFTAKIWNALTGDELHSFE 95
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 157 MILSSSRDKTLIVWKLTRDENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKT 327
++++ + D + VW++++D +K L H+ ++ + +S SGS D T
Sbjct: 3344 IVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCT 3403
Query: 328 LRLWDLAAGKTTRRFED 378
+ +WDL++ R+ D
Sbjct: 3404 VIIWDLSSLSFVRQLPD 3420
>At5g09760.1 68418.m01130 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 551
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 329 CVCGISLQARLPDDSRTILRMYSRVAFSVDN 421
CV +S Q R+P D + I ++S ++FS N
Sbjct: 58 CVSSLSEQGRVPPDPKPIQIIHSAISFSFQN 88
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 253 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 357
HS ++ + SSDG Y SG + L +W L GK
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFISD 273
T+ GH+ V+ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 274 VVLSSDGNYALSGS 315
V LS Y +GS
Sbjct: 715 VGLSVSDGYIATGS 728
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 97 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFISD 273
T+ GH+ V+ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 274 VVLSSDGNYALSGS 315
V LS Y +GS
Sbjct: 715 VGLSVSDGYIATGS 728
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 175 RDKTLIVWKLTRDENNYGIPQKRLYGHSH 261
R+ ++++KL R+E +Y + + LYG H
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCH 299
>At4g38010.1 68417.m05370 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 559
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +2
Query: 254 IRTSFLMLCCLVTVITPFPVLGTRLCVCGISLQARLPDDSRTILRMYSRVAFSVDNRQIV 433
I TS L C + + + + GI + I+ MY++ + +I
Sbjct: 308 ILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHI---GTAIVDMYAKCGYIETALEIF 364
Query: 434 SGSRDKTIXLWNT-LGGVQVY 493
+G R K + WN LGG+ ++
Sbjct: 365 NGIRSKNVFTWNALLGGLAIH 385
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 82 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-----RDENNYGIPQKRL 246
L+L +L H V + + Y MI SSS D T+I+W L+ R N+ +P +
Sbjct: 3314 LRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVV 3372
Query: 247 Y 249
Y
Sbjct: 3373 Y 3373
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 220 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
N G + L GH F DG +G+ DKT R+WD+
Sbjct: 307 NTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDI 348
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 61 FQKCLETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 198
F CL + K++ L GH+ +T +A + + ++++SS D L +W
Sbjct: 494 FIHCLSSRKVKEKLEGHDQKITCLAFSRCF-NVLVSSDSDGKLCLW 538
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 28.3 bits (60), Expect = 4.7
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 100 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
L H G V + N K P+ + S + D T+ +W L N P L G ++ +
Sbjct: 111 LSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLA----NPSKPSHYLKGTGSYMQSEI 166
Query: 280 LSSDGNYAL-----SGSWDKTLRLWDL 345
S N S S + T +WD+
Sbjct: 167 SSLSWNKGFQHVLASTSHNGTTVIWDV 193
>At1g16480.1 68414.m01971 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 905
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 377 TILRMYSRVAFSVDNRQIVSGSRDKTIXLWNTLGGVQVYHPR*WTQRLGVMCQILTQSCQ 556
T+LRMY+ SV+ + K + WN+L V R LG++C +++
Sbjct: 269 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR-SLDALGLLCSMISSGKS 327
Query: 557 PHY 565
+Y
Sbjct: 328 VNY 330
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 103 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 282
+GH+ + + + P+++ + S D W + + + Q H+ + +
Sbjct: 160 KGHDFELWTASFDLNNPNLVYTGSDDCKFSCWDIRDSPADNRVFQNSKV-HTMGVCCISS 218
Query: 283 SSDGNYAL-SGSWDKTLRLWD 342
+ Y++ +GS+D+TLR+WD
Sbjct: 219 NPSDPYSIFTGSYDETLRVWD 239
>At5g12430.1 68418.m01461 DNAJ heat shock N-terminal
domain-containing protein similarity to
TETRATRICOPEPTIDE REPEAT PROTEIN 2 , human,
SWISSPROT:TTC2_HUMAN; contains Pfam profiles PF00226:
DnaJ domain, PF00515: TPR Domain
Length = 1165
Score = 27.9 bits (59), Expect = 6.2
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 25 LTLQWSRRSSNH-FQKCLETLKL--RGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIV 195
L + S RS+ H Q+ +E L + RGT + N V + + ILS + L V
Sbjct: 174 LIIDSSSRSTGHVIQESMEKLNISERGTDQKQNNNVKSKVSMDYVGEKILSDDLSRKLSV 233
Query: 196 WKLTRDENNYG 228
+T D N+ G
Sbjct: 234 GSMTTDGNHSG 244
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 27.9 bits (59), Expect = 6.2
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +1
Query: 88 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 267
L+ G G ++ +A +P M+ S +T +++ E Y L+G +
Sbjct: 204 LQKNKEGQAGILSTLAFSPTNSGMLAVGSYGQTTGIYREDNMELLYV-----LHGQEGGV 258
Query: 268 SDVVLSSDGNYALSGS-WDKTLRLWDL 345
+ V S DGNY +G D + WD+
Sbjct: 259 THVQFSKDGNYLYTGGRKDPYILCWDI 285
>At4g04710.1 68417.m00692 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Nicotiana tabacum] gi|3283996|gb|AAC25423;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 575
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 394 LSGSLLS*QPSDSVWFSRQDYXTLEHPWRSASIPSKMMDTAI 519
L G +L+ +P + + S D LEHPW + P K +D +
Sbjct: 267 LIGKMLTKKPKERI--SAAD--VLEHPWMKSEAPDKPIDNVV 304
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 27.9 bits (59), Expect = 6.2
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 375
L ++ A S S D + +LWD G FE
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE 100
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 295 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS*QPSDSVWF 441
NY S +D +++WD G+ ++ +H K S + PSD F
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWS---VDFSPSDPTKF 824
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTT----RRFEDHTKDV 393
GH+ + + S G SG D + +WD +A+ +T R E+HT V
Sbjct: 264 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAV 317
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Frame = +1
Query: 250 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTT----RRFEDHTKDV 393
GH+ + + S G SG D + +WD +A+ +T R E+HT V
Sbjct: 254 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAV 307
>At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28170, At1g35110,
At1g44880, At3g42530, At4g19320, At5g36020, At3g43010,
At2g10350
Length = 1043
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 142 PKYPDMILSSSRDKTLIVWK-LTRDENNYGIPQ 237
P D++L S KT+++WK LT + +PQ
Sbjct: 220 PGLLDLVLDDSTSKTILLWKRLTHPKQVISLPQ 252
>At2g18810.1 68415.m02189 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 234
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSGSLLS*QP 423
++S NY L W+K + L G R + H+ D+L +L+ P
Sbjct: 139 MTSTSNYVLGSGWNKVVTENILETGTRLRLWSFHSPDMLFFALVLSDP 186
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 220 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 345
N G L GH F DG +G+ DKT R+WD+
Sbjct: 305 NTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDI 346
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 27.5 bits (58), Expect = 8.2
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 375
L ++ A S S D + +LWD G FE
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE 100
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLT 611
GH V CVRF+P + S D T+++W T
Sbjct: 268 GHHGPVHCVRFTPTGLS--YASGSEDGTIRIWQTT 300
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 27.5 bits (58), Expect = 8.2
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +1
Query: 106 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 279
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 280 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 375
L ++ A S S D + +LWD G FE
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE 100
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 507 GHSDWVSCVRFSPNHANPIIVSCGWDXTVKVWHLT 611
GH V CVRF+P + S D T+++W T
Sbjct: 268 GHHGPVHCVRFTPTGLS--YASGSEDGTIRIWQTT 300
>At1g27120.1 68414.m03305 galactosyltransferase family protein
contains Pfam profile:PF01762 galactosyltransferase
Length = 673
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 421 PSDSVWFSRQDYXTLEHPWRSASIPSKMMDTAIGCHVSDSH 543
PS + F+ Q + ++ W++ S+P K ++ IG + +H
Sbjct: 397 PSTNPSFAPQKHLEMQRIWKAPSLPQKPVELFIGILSAGNH 437
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,171,462
Number of Sequences: 28952
Number of extensions: 329306
Number of successful extensions: 2135
Number of sequences better than 10.0: 211
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2023
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -