Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_K13
         (506 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   4.8  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   4.8  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   4.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   4.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   4.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   4.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   4.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   4.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   4.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.3  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.4  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   8.4  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
 Frame = -1

Query: 470 SLSCSFFNHLKWS*SATXRSNESDLSPNPRPIYAARPLS--SCIFTTK*RELS--VTASS 303
           S SC + +    S S+T  ++  DLS N  P  +  PLS  S    TK   L+  ++ S+
Sbjct: 96  SASCKYAD----STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVST 151

Query: 302 ATPGYLSIGHFANNSPLVLSSNFMTNS 222
           + PG  +    + N     SS   T+S
Sbjct: 152 SPPGKPATSTTSQNLSSPASSTSSTSS 178


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
 Frame = -1

Query: 470 SLSCSFFNHLKWS*SATXRSNESDLSPNPRPIYAARPLS--SCIFTTK*RELS--VTASS 303
           S SC + +    S S+T  ++  DLS N  P  +  PLS  S    TK   L+  ++ S+
Sbjct: 96  SASCKYAD----STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVST 151

Query: 302 ATPGYLSIGHFANNSPLVLSSNFMTNS 222
           + PG  +    + N     SS   T+S
Sbjct: 152 SPPGKPATSTASQNLSSPASSTSSTSS 178


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
 Frame = -1

Query: 470 SLSCSFFNHLKWS*SATXRSNESDLSPNPRPIYAARPLS--SCIFTTK*RELS--VTASS 303
           S SC + +    S S+T  ++  DLS N  P  +  PLS  S    TK   L+  ++ S+
Sbjct: 96  SASCKYAD----STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVST 151

Query: 302 ATPGYLSIGHFANNSPLVLSSNFMTNS 222
           + PG  +    + N     SS   T+S
Sbjct: 152 SPPGKPATSTASQNLSSPASSTSSTSS 178


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
 Frame = -1

Query: 470 SLSCSFFNHLKWS*SATXRSNESDLSPNPRPIYAARPLS--SCIFTTK*RELS--VTASS 303
           S SC + +    S S+T  ++  DLS N  P  +  PLS  S    TK   L+  ++ S+
Sbjct: 96  SASCKYAD----STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVST 151

Query: 302 ATPGYLSIGHFANNSPLVLSSNFMTNS 222
           + PG  +    + N     SS   T+S
Sbjct: 152 SPPGKPATSTASQNLSSPASSTSSTSS 178


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
 Frame = -1

Query: 470 SLSCSFFNHLKWS*SATXRSNESDLSPNPRPIYAARPLS--SCIFTTK*RELS--VTASS 303
           S SC + +    S S+T  ++  DLS N  P  +  PLS  S    TK   L+  ++ S+
Sbjct: 96  SASCKYAD----STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVST 151

Query: 302 ATPGYLSIGHFANNSPLVLSSNFMTNS 222
           + PG  +    + N     SS   T+S
Sbjct: 152 SPPGKPATSTASQNLSSPASSTSSTSS 178


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
 Frame = -1

Query: 470 SLSCSFFNHLKWS*SATXRSNESDLSPNPRPIYAARPLS--SCIFTTK*RELS--VTASS 303
           S SC + +    S S+T  ++  DLS N  P  +  PLS  S    TK   L+  ++ S+
Sbjct: 52  SASCKYAD----STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVST 107

Query: 302 ATPGYLSIGHFANNSPLVLSSNFMTNS 222
           + PG  +    + N     SS   T+S
Sbjct: 108 SPPGKPATSTASQNLSSPASSTSSTSS 134


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -1

Query: 269 ANNSPLVLSSNFMTNSFPFDTNLMRPVHCGSCKF 168
           A+ SPL+ SS+     FP D  +  P   G   F
Sbjct: 175 ASVSPLISSSSSPPGVFPVDAPMHSPPGDGILDF 208


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
 Frame = -1

Query: 470 SLSCSFFNHLKWS*SATXRSNESDLSPNPRPIYAARPLS--SCIFTTK*RELS--VTASS 303
           S SC + +    S S+T  ++  DLS N  P  +  PLS  S    TK   L+  ++ S+
Sbjct: 96  SASCKYAD----STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVST 151

Query: 302 ATPGYLSIGHFANNSPLVLSSNFMTNS 222
           + PG  +    + N     SS   T+S
Sbjct: 152 SPPGKPATSTASQNLSSPASSTSSTSS 178


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
 Frame = -1

Query: 470 SLSCSFFNHLKWS*SATXRSNESDLSPNPRPIYAARPLS--SCIFTTK*RELS--VTASS 303
           S SC + +    S S+T  ++  DLS N  P  +  PLS  S    TK   L+  ++ S+
Sbjct: 96  SASCKYAD----STSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVST 151

Query: 302 ATPGYLSIGHFANNSPLVLSSNFMTNS 222
           + PG  +    + N     SS   T+S
Sbjct: 152 SPPGKPATSTASQNLSSPASSTSSTSS 178


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 395 SPNPRPIYAARPLSSCIFTT 336
           SP P P  AA P+SS   T+
Sbjct: 10  SPPPAPQSAATPISSSGMTS 29


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 468 ALLFFFQPFEMV 433
           ALLFFF  FE V
Sbjct: 273 ALLFFFAGFETV 284


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 470 SLSCSFFNHLKWS*SATXRSNESDLSPNPRPIYAARPLSS 351
           S SC + +    S S+T  ++  DLS N  P  +  PLS+
Sbjct: 96  SASCKYAD----STSSTGVASPQDLSTNGAPPRSTPPLST 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,017
Number of Sequences: 336
Number of extensions: 3030
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)