Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_K13
(506 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25) 32 0.24
SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25) 29 2.2
SB_2307| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 28 3.8
SB_44627| Best HMM Match : Kazal_1 (HMM E-Value=3.19496e-43) 28 3.8
SB_20140| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 5.1
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_37975| Best HMM Match : UBA (HMM E-Value=4.6e-10) 27 6.7
SB_30667| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_39978| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44) 27 6.7
SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1) 27 6.7
SB_48207| Best HMM Match : Peptidase_C5 (HMM E-Value=0.33) 27 8.9
SB_49363| Best HMM Match : Laminin_G_2 (HMM E-Value=0.0048) 27 8.9
SB_40011| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_27526| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-08) 27 8.9
SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25)
Length = 1962
Score = 32.3 bits (70), Expect = 0.24
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 229 VMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDDNGRAAYI-GLGFGDRSD 405
+M+ + + EL A D Y E V S R + +D NG AAYI L D+
Sbjct: 1773 LMEFDPMRTEELEAMARSDPYIESVFEGVLPSDRLPTIIPEDGNGDAAYIVNLDPSDKPG 1832
Query: 406 SFDLXVAL-QDHFKW 447
S L V DH +W
Sbjct: 1833 SHWLAVYFTPDHCEW 1847
>SB_41240| Best HMM Match : UCH (HMM E-Value=9.2e-25)
Length = 1088
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 109 VFVFKIPPRTSNRGYRAADWNLQEPQ---WTGRMRLVSKGNELVMKLED 246
V+ F P + S G AAD + + Q W G R+VSK E +++L++
Sbjct: 24 VYCFDSPVQLSLAGVLAADTSAYKEQVASWDGEKRVVSKHAESLLQLDN 72
>SB_2307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 391 GDRSDSFDLXVALQDHFKW 447
GD +SFD+ L+D+FKW
Sbjct: 121 GDLKESFDIGHILEDYFKW 139
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 6170 NECLLKLSACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 6215
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 5402 NECLLKLAACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 5447
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 5882 NECLLKLAACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 5927
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 5954 NECLLKLTACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 5999
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 6026 NECLLKLAACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 6071
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 6098 NECLLKLAACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 6143
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 6242 NECLLKLAACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 6287
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 6314 NECLLKLAACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 6359
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 6629 NECLLKLAACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 6674
>SB_44627| Best HMM Match : Kazal_1 (HMM E-Value=3.19496e-43)
Length = 260
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 164 NECLLKLSACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 209
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 20 NECLLKLAACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 65
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 92 NECLLKLAACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 137
>SB_20140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 398 LSPNPRPIYAARPLSSCIFTTK*RELSVTASSA-TPGYLSI 279
L P P P+YA + + + IF ++ R +S P Y+S+
Sbjct: 266 LPPQPNPVYATKGMRTVIFGSRIRTVSFEGKKVLRPVYMSL 306
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 461 NECLLKLAACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 506
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 389 NECLLKLAACKSKSRILIAGSGRYPGPCSGVTCDSPPYSTCKVQDD 434
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 20 NECLLKLAACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 65
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 92 NECLLKLAACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 137
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 220 NELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDD 357
NE ++KL S +YPG DS Y K+QDD
Sbjct: 164 NECLLKLAACKSKSRILIAGFGRYPGPCSGVTCDSPPYSTCKVQDD 209
>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 27.5 bits (58), Expect = 6.7
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +1
Query: 259 ELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDDNGRAAYI-GLGFGDRSDSFDLXVAL-Q 432
EL A D Y E V S R +D NG AAYI + D+ S L V
Sbjct: 5 ELDAMARSDPYIESVFEGVFPSDRLPTTIPEDGNGDAAYIVNVDPSDKPGSHWLAVYFTP 64
Query: 433 DHFKW 447
DH +W
Sbjct: 65 DHCEW 69
>SB_37975| Best HMM Match : UBA (HMM E-Value=4.6e-10)
Length = 473
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -2
Query: 436 GLEVQHXDQTNQIYHQIQDRYMQHDHYHLVFSQQNNVSYQLQLPVQLL 293
GL H D T+ + H R HDH L+ ++ S + P +L+
Sbjct: 319 GLRCCHGDVTSAVDHITSKRQTLHDHPELLDLPPDDCSSDVTFPEELV 366
>SB_30667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 27.5 bits (58), Expect = 6.7
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +1
Query: 259 ELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDDNGRAAYI-GLGFGDRSDSFDLXVAL-Q 432
EL A D Y E V S R +D NG AAYI + D+ S L V
Sbjct: 5 ELDAMARSDPYIESVFEGVFPSDRLPTTIPEDGNGDAAYIVNVDPSDKPGSHWLAVYFTP 64
Query: 433 DHFKW 447
DH +W
Sbjct: 65 DHCEW 69
>SB_39978| Best HMM Match : 7tm_1 (HMM E-Value=8.54792e-44)
Length = 429
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 169 NLQEPQWTGRMRLVSKGNELVMKLEDKTSGELFA 270
NLQ PQ T R RL S N ++ E + + LFA
Sbjct: 294 NLQLPQATQRRRLSSARNRIISLEEIRATNMLFA 327
>SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1)
Length = 245
Score = 27.5 bits (58), Expect = 6.7
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +1
Query: 259 ELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDDNGRAAYI-GLGFGDRSDSFDLXVAL-Q 432
EL A D Y E V S R +D NG AAYI + D+ S L V
Sbjct: 5 ELEAMARSDPYIESVFEGVFPSDRLPTTIPEDGNGDAAYIVNVDPSDKPGSHWLAVYFTP 64
Query: 433 DHFKW 447
DH +W
Sbjct: 65 DHCEW 69
>SB_48207| Best HMM Match : Peptidase_C5 (HMM E-Value=0.33)
Length = 184
Score = 27.1 bits (57), Expect = 8.9
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +1
Query: 259 ELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDDNGRAAYI-GLGFGDRSDSFDLXVAL-Q 432
EL A D Y + V S R + +D NG AAYI + D+ S L V
Sbjct: 5 ELEAMARSDPYIESVFKGVFPSDRLPTIIPEDGNGDAAYIVNVDPSDKPGSHWLAVYFTP 64
Query: 433 DHFKW 447
DH +W
Sbjct: 65 DHCEW 69
>SB_49363| Best HMM Match : Laminin_G_2 (HMM E-Value=0.0048)
Length = 355
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -1
Query: 227 NSFPFDTNLMRPVHCG 180
+S P+D+N M+P HCG
Sbjct: 248 SSTPWDSNAMKPGHCG 263
>SB_40011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 27.1 bits (57), Expect = 8.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 397 YHQIQDRYMQHDHYHL 350
+HQ+ D + HDH+HL
Sbjct: 107 HHQLHDHHHLHDHHHL 122
>SB_27526| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-08)
Length = 326
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Frame = -3
Query: 501 SKIQLSLWCLIALLFFFQPF---EMVLKCNX*IKR---IRSITKSKTDICSTTIIIL 349
S++QLS W FFF F M+ I+R I+S+TKSK ++T +IL
Sbjct: 21 SRVQLSAWLCSMFGFFFALFAAVSMLALLLIAIERHHAIKSMTKSKLSAITSTRMIL 77
>SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1511
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 301 ALEAVTDSSRYFVVKIQDDNGRAAYIGLGFGDRSDSF 411
A + V RY ++K + G A Y G FG RS F
Sbjct: 1131 ARKHVGQQDRYLILKAVGNRGSACYFG-HFGQRSSQF 1166
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,452,003
Number of Sequences: 59808
Number of extensions: 339616
Number of successful extensions: 807
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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