Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_K13
         (506 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024748-2|AAF60412.1|  236|Caenorhabditis elegans Hypothetical ...   172   1e-43
AC024748-3|AAO38567.1|   69|Caenorhabditis elegans Hypothetical ...    77   1e-14
AF101305-5|AAF98597.2|  341|Caenorhabditis elegans Serpentine re...    31   0.36 
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>AC024748-2|AAF60412.1|  236|Caenorhabditis elegans Hypothetical
           protein Y110A2AR.3a protein.
          Length = 236

 Score =  172 bits (418), Expect = 1e-43
 Identities = 78/148 (52%), Positives = 109/148 (73%), Gaps = 3/148 (2%)
 Frame = +1

Query: 70  MDTYESVILVKNEVFVFKIPPRTSNRGYRAADWNLQEPQWTGRMRLVSKGNELVMKLEDK 249
           M  YE+V++VK +VFV++IPP     G++AADWNL  P WTGRMRLV+ G  L M+LED 
Sbjct: 1   MGDYENVLMVKPKVFVYRIPP-IGTSGHKAADWNLDSPAWTGRMRLVAIGKRLEMRLEDG 59

Query: 250 TSGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQDDNGRAAYIGLGFGDRSDSFDLXVAL 429
            + +L+AKCPID +PG A+EAV+DSSRYFV+++Q+DNG+ A++G GF +R D+FD  V L
Sbjct: 60  ETCDLYAKCPIDAHPGNAIEAVSDSSRYFVIRLQNDNGQQAFVGCGFQERGDAFDFNVTL 119

Query: 430 QDHFKWLKKEQE---SDQTPQGQLDLGF 504
           QDHF+++++  E    D +    LDL F
Sbjct: 120 QDHFRYIERSAELEKQDLSAGPSLDLAF 147


>AC024748-3|AAO38567.1|   69|Caenorhabditis elegans Hypothetical
           protein Y110A2AR.3b protein.
          Length = 69

 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 34/59 (57%), Positives = 44/59 (74%)
 Frame = +1

Query: 70  MDTYESVILVKNEVFVFKIPPRTSNRGYRAADWNLQEPQWTGRMRLVSKGNELVMKLED 246
           M  YE+V++VK +VFV++IPP     G++AADWNL  P WTGRMRLV+ G  L M+LED
Sbjct: 1   MGDYENVLMVKPKVFVYRIPP-IGTSGHKAADWNLDSPAWTGRMRLVAIGKRLEMRLED 58


>AF101305-5|AAF98597.2|  341|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 3 protein.
          Length = 341

 Score = 31.5 bits (68), Expect = 0.36
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
 Frame = -3

Query: 165 ICCPISSVRCSGWYFK-----NEYFVLH*NNTFISIHCL*KIML 49
           +C PIS       YF      N   VL  NNTF+ IHCL +I+L
Sbjct: 32  MCIPISIYSLWRIYFSVKLHFNSKIVLFTNNTFVLIHCLARIVL 75


>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical
           protein T16G12.1 protein.
          Length = 1890

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 284 SIGHFAN-NSPLVLSSNFMTNSFPFDTNLMRPVHCGSCKFQSA 159
           ++  FAN  S  + S N      P+ TNL + ++CG+ K+  A
Sbjct: 787 TLNMFANVKSACINSLNGTAWCNPYSTNLRKAIYCGAAKYAPA 829


>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
            T28C6.9 protein.
          Length = 1861

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 91   ILVKNEVFVF-KIPPRTSNRGYRAADWNLQEPQWTGRMRLVSKGNELVMKLEDKTS 255
            I+ K EV +  K   +T N G+   DW   + + T   +L    NEL  ++E   S
Sbjct: 1409 IIQKLEVDIAEKEQEKTDNDGWNDEDWREDDQKETESEKLTQLRNELTARIEQLES 1464


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,459,374
Number of Sequences: 27780
Number of extensions: 266475
Number of successful extensions: 707
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)