Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_K13
(506 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g03900.1 68414.m00374 expressed protein 133 6e-32
At3g58600.1 68416.m06531 expressed protein hypothetical protein ... 116 7e-27
At1g56120.1 68414.m06444 leucine-rich repeat family protein / pr... 29 2.4
At4g29680.1 68417.m04228 type I phosphodiesterase/nucleotide pyr... 28 3.1
At1g79580.3 68414.m09279 no apical meristem (NAM) family protein... 28 3.1
At1g79580.2 68414.m09278 no apical meristem (NAM) family protein... 28 3.1
At1g79580.1 68414.m09277 no apical meristem (NAM) family protein... 28 3.1
At1g30100.1 68414.m03679 9-cis-epoxycarotenoid dioxygenase, puta... 28 4.2
At3g04170.1 68416.m00441 germin-like protein, putative contains ... 27 5.5
At1g71400.1 68414.m08246 disease resistance family protein / LRR... 27 5.5
At2g42920.1 68415.m05318 pentatricopeptide (PPR) repeat-containi... 27 7.3
At5g41310.1 68418.m05020 kinesin motor protein-related 27 9.6
At2g28520.1 68415.m03465 vacuolar proton ATPase, putative simila... 27 9.6
>At1g03900.1 68414.m00374 expressed protein
Length = 272
Score = 133 bits (322), Expect = 6e-32
Identities = 63/144 (43%), Positives = 97/144 (67%), Gaps = 3/144 (2%)
Frame = +1
Query: 73 DTYESVILVKNEVFVFKIPPRTSNRGYRAADWNLQEPQWTGRMRLVSKGNELVMKLEDKT 252
+T+E +LV EV V+KIPPRT++ GY+ +W + W+GR+R+VS + ++LED
Sbjct: 10 ETFEHTLLVVREVSVYKIPPRTTSGGYKCGEWLQSDKIWSGRLRVVSCKDRCEIRLEDSN 69
Query: 253 SGELFAKCPIDKYPG---VALEAVTDSSRYFVVKIQDDNGRAAYIGLGFGDRSDSFDLXV 423
SG+LFA C +D PG ++E DSSRYFV++I D G+ A+IGLGF +R+++FD V
Sbjct: 70 SGDLFAACFVD--PGRRENSVEPSLDSSRYFVLRIDDGRGKYAFIGLGFAERNEAFDFNV 127
Query: 424 ALQDHFKWLKKEQESDQTPQGQLD 495
AL DH K++++E+E + + D
Sbjct: 128 ALSDHEKYVRREKEKETGETSESD 151
>At3g58600.1 68416.m06531 expressed protein hypothetical protein
F21M11.17 - Arabidopsis thaliana, EMBL:AC003027
Length = 302
Score = 116 bits (280), Expect = 7e-27
Identities = 54/129 (41%), Positives = 88/129 (68%), Gaps = 3/129 (2%)
Frame = +1
Query: 106 EVFVFKIPPRTSNRGYRAADWNLQEPQWTGRMRLVSKGNELVMKLEDKTSGELFAKCPID 285
E +V+ IPPR + YRA +W++ + W G +++VSKG E ++KL DKT+GEL+A+ +
Sbjct: 41 ECYVYLIPPRKTAASYRADEWDVNKWAWEGALKVVSKGEECIIKLVDKTTGELYAQAFLR 100
Query: 286 KYPGVALEAVTDSSRYFVVKIQ---DDNGRAAYIGLGFGDRSDSFDLXVALQDHFKWLKK 456
+ +EAV DSSRYFV++++ D R A+IGLGF +R++++D AL DH K+L K
Sbjct: 101 EGELHPVEAVIDSSRYFVLRVEEKIDGRVRHAFIGLGFRERTEAYDFQAALHDHMKYLNK 160
Query: 457 EQESDQTPQ 483
++ +++ Q
Sbjct: 161 KKTAEEMEQ 169
>At1g56120.1 68414.m06444 leucine-rich repeat family protein / protein
kinase family protein contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 1045
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -1
Query: 374 YAARPLSSCIFTTK*RELSVTASSATPGYLSIGHFANNSPLVLSSNFMTNSFPFDTNLMR 195
YA RP S + + V +++ PGYL+ F + + SNF T F T+ +
Sbjct: 963 YALRPPMSRVVAMLSGDAEVNDATSKPGYLTDCTFDDTTSSSF-SNFQTKDTSFSTSFIA 1021
Query: 194 P 192
P
Sbjct: 1022 P 1022
>At4g29680.1 68417.m04228 type I phosphodiesterase/nucleotide
pyrophosphatase family protein similar to SP|P06802
Ectonucleotide pyrophosphatase/phosphodiesterase 1
(Plasma-cell membrane glycoprotein PC-1) [Includes:
Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide
pyrophosphatase (EC 3.6.1.9) {Mus musculus}; contains
Pfam profile PF01663: Type I phosphodiesterase /
nucleotide pyrophosphatase
Length = 496
Score = 28.3 bits (60), Expect = 3.1
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = -1
Query: 371 AARPLSSCIFTTK*RELSVTASSATPGYLSIGHFANNSPLVLSSNFMTNSFPFDTNLMRP 192
+ R +SSC T ++ A SA + + F++ P VLS N ++ S FD ++ RP
Sbjct: 43 STRSISSCFIFTSLLLVTCIALSAASAFAFL-FFSSQKP-VLSLNQISKSPAFDRSVARP 100
Query: 191 V 189
+
Sbjct: 101 L 101
>At1g79580.3 68414.m09279 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 424 QHXDQTNQIYHQIQDRYMQHDHYHLVFSQQNNVS 323
Q +Q + +HQ HDH+H + S NN S
Sbjct: 175 QEQEQDHHHHHQYISTNNDHDHHHHIDSNSNNHS 208
>At1g79580.2 68414.m09278 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 424 QHXDQTNQIYHQIQDRYMQHDHYHLVFSQQNNVS 323
Q +Q + +HQ HDH+H + S NN S
Sbjct: 175 QEQEQDHHHHHQYISTNNDHDHHHHIDSNSNNHS 208
>At1g79580.1 68414.m09277 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 424 QHXDQTNQIYHQIQDRYMQHDHYHLVFSQQNNVS 323
Q +Q + +HQ HDH+H + S NN S
Sbjct: 175 QEQEQDHHHHHQYISTNNDHDHHHHIDSNSNNHS 208
>At1g30100.1 68414.m03679 9-cis-epoxycarotenoid dioxygenase,
putative / neoxanthin cleavage enzyme, putative /
carotenoid cleavage dioxygenase, putative similar to
9-cis-epoxycarotenoid dioxygenase GI:6715257 from
[Phaseolus vulgaris]
Length = 589
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -1
Query: 422 TXRSNESDLSPNPRPIYAARPLSSCIFTT---K*RELSVTASSATPGYLSIGHFANNSPL 252
T + +LS P + A P SS FT + R+LS + S TP L+ ++ + +P+
Sbjct: 8 TPNPTKLNLSFAPSDLDAPSPSSSVSFTNTKPRRRKLSANSVSDTPNLLNFPNYPSPNPI 67
Query: 251 V 249
+
Sbjct: 68 I 68
>At3g04170.1 68416.m00441 germin-like protein, putative contains
Pfam profile: PF01072 germin family; similar to
germin-like protein type2 GB:CAA63023 [SP|P92996], GLP6
[SP|P92997], GLP2A [SP|P92999] [Arabidopsis thaliana]
Length = 227
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -1
Query: 305 SATPGYLSIGHFANNSPLVLSSNFMTNSFPFDTNLMR 195
S PGY+S+G S + + +F D N++R
Sbjct: 176 SQNPGYISVGDAVFGSKPPIDPKILAKAFALDINIVR 212
>At1g71400.1 68414.m08246 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596
Length = 847
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 287 LSIGHFANNSPLVLSSNFMTNSFPFDTNL 201
+S + S VLSSN T++FPFD ++
Sbjct: 272 ISFANLTKLSIFVLSSNNFTSTFPFDMSI 300
>At2g42920.1 68415.m05318 pentatricopeptide (PPR) repeat-containing
protein and genefinder
Length = 559
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 227 NSFPFDTNLMRPVHCGSCKFQSAALYPLLDVLGGILKTNTSFFTKI 90
+S D + + CG +SA +Y LLD+L + T S F ++
Sbjct: 499 SSIEVDFEVHEFISCGGTHPKSAEIYSLLDILNWDVSTIKSGFAEL 544
>At5g41310.1 68418.m05020 kinesin motor protein-related
Length = 961
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = -2
Query: 367 HDHYHLVFSQQNNVSYQLQLPVQLLDIY 284
+D +HL S+QN+V Y ++ VQ+++IY
Sbjct: 535 NDLFHLTQSRQNSVMY--EVGVQMVEIY 560
>At2g28520.1 68415.m03465 vacuolar proton ATPase, putative similar
to Swiss-Prot:Q93050 vacuolar proton translocating
ATPase 116 kDa subunit A isoform 1 (Clathrin-coated
vesicle/synaptic vesicle proton pump 116 kDa subunit,
Vacuolar proton pump subunit 1, Vacuolar adenosine
triphosphatase subunit Ac116) [Homo sapiens]
Length = 817
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 3 SFQEILFYGRYCGIPLTLFFINNGYL*KCYFS 98
SF E+LF GRY + + LF I G + +FS
Sbjct: 459 SFMEMLFGGRYVILLMALFSIYCGLIYNEFFS 490
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,623,010
Number of Sequences: 28952
Number of extensions: 240015
Number of successful extensions: 709
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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