Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_K12
         (668 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6CBU0 Cluster: Yarrowia lipolytica chromosome C of str...    37   0.38 
UniRef50_UPI00015B47CC Cluster: PREDICTED: similar to AT07338p; ...    35   2.0  
UniRef50_Q54ZB3 Cluster: Putative uncharacterized protein; n=3; ...    34   2.7  
UniRef50_P15170 Cluster: G1 to S phase transition protein 1 homo...    34   3.6  
UniRef50_Q5CQC1 Cluster: Uncharacterized secreted protein with t...    33   6.2  
UniRef50_O45622 Cluster: Putative uncharacterized protein; n=2; ...    33   6.2  
UniRef50_Q2JEA6 Cluster: Putative uncharacterized protein; n=4; ...    33   8.2  
UniRef50_A0UYX6 Cluster: Allergen V5/Tpx-1 related precursor; n=...    33   8.2  

>UniRef50_Q6CBU0 Cluster: Yarrowia lipolytica chromosome C of strain
           CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
           lipolytica|Rep: Yarrowia lipolytica chromosome C of
           strain CLIB122 of Yarrowia lipolytica - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 812

 Score = 37.1 bits (82), Expect = 0.38
 Identities = 32/122 (26%), Positives = 44/122 (36%)
 Frame = +3

Query: 105 SNNGAPDSWENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSPTS 284
           SN+G+  S  N A   G  G  +SND  + I+  N  +   V SF    + S+ST  PT+
Sbjct: 232 SNHGSSGSNGNTAVDNGNNGNSNSNDNGNNING-NDKSGNDVTSFIDDIRVSNST--PTA 288

Query: 285 PQKXXXXXXXXXXXPVLNXXXXXXXXXXXXXXXXXXPRVEEPPPTTASVPPDVSPTADSW 464
            +            P+L                   P V    P + S  P  S T    
Sbjct: 289 VESTQLSQSSASSSPILTNSSQSLDSIAFSDSQFISPIVLSTTPNSGSTTPSNSGTITGS 348

Query: 465 EV 470
           EV
Sbjct: 349 EV 350


>UniRef50_UPI00015B47CC Cluster: PREDICTED: similar to AT07338p;
           n=2; Nasonia vitripennis|Rep: PREDICTED: similar to
           AT07338p - Nasonia vitripennis
          Length = 513

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +3

Query: 102 MSNNGAPDSWENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSF 239
           M+N+ A + WE +A+  G     D + V    S ++VNA +FVPSF
Sbjct: 1   MANSVASELWEQQADDNGVADCLDKS-VKCTFSLVDVNAADFVPSF 45


>UniRef50_Q54ZB3 Cluster: Putative uncharacterized protein; n=3;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 1449

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 21/63 (33%), Positives = 30/63 (47%)
 Frame = +3

Query: 105 SNNGAPDSWENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSPTS 284
           +NN  P+  E + E +       SND  SKIS    N  ++  S S  S  + +T+SPT 
Sbjct: 394 NNNDQPEEEEQDDEKL------ISNDYQSKISKFKSNLQQYTSSLSSMSSTTTTTNSPTF 447

Query: 285 PQK 293
             K
Sbjct: 448 ESK 450


>UniRef50_P15170 Cluster: G1 to S phase transition protein 1
           homolog; n=77; Eukaryota|Rep: G1 to S phase transition
           protein 1 homolog - Homo sapiens (Human)
          Length = 499

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +3

Query: 570 ELTKKIPKKKPPRVEDTRSXKEHVNVVFIGHV 665
           E  ++IPK K          KEHVNVVFIGHV
Sbjct: 52  EEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHV 83


>UniRef50_Q5CQC1 Cluster: Uncharacterized secreted protein with thr
           rich regions, possible mucin; n=2; Cryptosporidium|Rep:
           Uncharacterized secreted protein with thr rich regions,
           possible mucin - Cryptosporidium parvum Iowa II
          Length = 564

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 17/71 (23%), Positives = 22/71 (30%)
 Frame = +3

Query: 240 SKPSQASDSTDSPTSPQKXXXXXXXXXXXPVLNXXXXXXXXXXXXXXXXXXPRVEEPPPT 419
           S P+ A+    + TSP             P                     P     PPT
Sbjct: 348 SPPTTATSPPTTATSPPTTATSPPTTATSPPTTATSPPTTATSPPTTATSPPTTATSPPT 407

Query: 420 TASVPPDVSPT 452
           TA+ PP  +PT
Sbjct: 408 TATSPPTTTPT 418


>UniRef50_O45622 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 532

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 2/93 (2%)
 Frame = +3

Query: 393 PRVEEPPPTTA-SVPPDVSPTADSWEVEADDALLTXXXXXXXXXXXLDTQVGNTNPNEDG 569
           P    P PT       D SP A   EV    A+               T+     P  + 
Sbjct: 30  PEQAAPEPTEDWEAQADTSPAAVQPEVAEPVAVQESAPVAPVSA----TEAPKKEPTPEE 85

Query: 570 ELTKKIPKKKPPRVE-DTRSXKEHVNVVFIGHV 665
           +L   + KK    V  D  + KEH+N+VF+GHV
Sbjct: 86  DLVAPLAKKFQRTVYVDDGTHKEHINMVFVGHV 118


>UniRef50_Q2JEA6 Cluster: Putative uncharacterized protein; n=4;
           Actinomycetales|Rep: Putative uncharacterized protein -
           Frankia sp. (strain CcI3)
          Length = 274

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +3

Query: 141 AEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSPTSP 287
           A I+G     +  D+S  I+ L V  + FVP    P+   DS    T+P
Sbjct: 138 ASILGSSAVAELLDLSQPIAVLMVTVLHFVPDSDDPAGVIDSFREATAP 186


>UniRef50_A0UYX6 Cluster: Allergen V5/Tpx-1 related precursor; n=1;
           Clostridium cellulolyticum H10|Rep: Allergen V5/Tpx-1
           related precursor - Clostridium cellulolyticum H10
          Length = 328

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 159 KGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSPTSPQK 293
           K   +SN  S+  S LN       P+ SKPS +  +T  P +PQK
Sbjct: 147 KNTNNSNIQSALNSILNSRLSAAKPTTSKPSTSKPATSKPATPQK 191


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,049,824
Number of Sequences: 1657284
Number of extensions: 9350747
Number of successful extensions: 35493
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35344
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)