Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_K12
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = -1

Query: 185 HIIRILCTFFTYYFRFIF 132
           H++ ++C ++ YY   +F
Sbjct: 251 HLLLLVCIYYFYYMHLLF 268


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 15/54 (27%), Positives = 20/54 (37%)
 Frame = +3

Query: 129 WENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSPTSPQ 290
           WE   E   E+G K   D  +   T N  A    P     S       +P+SP+
Sbjct: 14  WEGGEEGSPEEGDKLEGDEDTGSMTPNSAASPAPPEEEAASPTPGDVPTPSSPR 67


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 408 PPPTTASVPPDVSPTADS 461
           P PT   +PP   PT  S
Sbjct: 207 PKPTVPKIPPAEFPTTSS 224


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 408 PPPTTASVPPDVSPTADS 461
           P PT   +PP   PT  S
Sbjct: 207 PKPTVPKIPPAEFPTTSS 224


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory
          receptor candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 72 WSSFPVN*NYLDSVPTRSACVFI 4
          W  FP N  Y  S+    AC+ +
Sbjct: 30 WYDFPTNQKYYPSLAKCYACLLM 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,915
Number of Sequences: 336
Number of extensions: 2450
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)