Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_K12
(668 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17644-1|CAA35635.1| 499|Homo sapiens protein ( Human GST1-Hs m... 34 0.53
U95742-2|AAB67250.1| 499|Homo sapiens G1 to S phase transition ... 34 0.53
BT006722-1|AAP35368.1| 498|Homo sapiens G1 to S phase transitio... 34 0.53
BC009503-1|AAH09503.2| 633|Homo sapiens GSPT1 protein protein. 34 0.53
BC036077-1|AAH36077.1| 628|Homo sapiens G1 to S phase transitio... 33 0.92
AL929101-2|CAH71524.1| 628|Homo sapiens G1 to S phase transitio... 33 0.92
AK023155-1|BAB14435.1| 504|Homo sapiens protein ( Homo sapiens ... 33 0.92
AK001303-1|BAA91612.1| 628|Homo sapiens protein ( Homo sapiens ... 33 0.92
AJ251548-1|CAB91089.1| 628|Homo sapiens polypeptide chain relea... 33 0.92
Y13619-1|CAA73941.1| 2070|Homo sapiens DFFRY protein. 31 4.9
Y13618-1|CAA73940.1| 2555|Homo sapiens DFFRY protein. 31 4.9
>X17644-1|CAA35635.1| 499|Homo sapiens protein ( Human GST1-Hs mRNA
for GTP-binding protein. ).
Length = 499
Score = 33.9 bits (74), Expect = 0.53
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 570 ELTKKIPKKKPPRVEDTRSXKEHVNVVFIGHV 665
E ++IPK K KEHVNVVFIGHV
Sbjct: 52 EEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHV 83
>U95742-2|AAB67250.1| 499|Homo sapiens G1 to S phase transition
protein protein.
Length = 499
Score = 33.9 bits (74), Expect = 0.53
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 570 ELTKKIPKKKPPRVEDTRSXKEHVNVVFIGHV 665
E ++IPK K KEHVNVVFIGHV
Sbjct: 52 EEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHV 83
>BT006722-1|AAP35368.1| 498|Homo sapiens G1 to S phase transition 1
protein.
Length = 498
Score = 33.9 bits (74), Expect = 0.53
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 570 ELTKKIPKKKPPRVEDTRSXKEHVNVVFIGHV 665
E ++IPK K KEHVNVVFIGHV
Sbjct: 51 EEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHV 82
>BC009503-1|AAH09503.2| 633|Homo sapiens GSPT1 protein protein.
Length = 633
Score = 33.9 bits (74), Expect = 0.53
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3
Query: 570 ELTKKIPKKKPPRVEDTRSXKEHVNVVFIGHV 665
E ++IPK K KEHVNVVFIGHV
Sbjct: 186 EEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHV 217
>BC036077-1|AAH36077.1| 628|Homo sapiens G1 to S phase transition 2
protein.
Length = 628
Score = 33.1 bits (72), Expect = 0.92
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +3
Query: 555 PNEDG----ELTKKIPKKKPPRVEDTRSXKEHVNVVFIGHV 665
P E G E ++I K K V KEHVNVVFIGHV
Sbjct: 172 PEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHV 212
>AL929101-2|CAH71524.1| 628|Homo sapiens G1 to S phase transition 2
protein.
Length = 628
Score = 33.1 bits (72), Expect = 0.92
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +3
Query: 555 PNEDG----ELTKKIPKKKPPRVEDTRSXKEHVNVVFIGHV 665
P E G E ++I K K V KEHVNVVFIGHV
Sbjct: 172 PEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHV 212
>AK023155-1|BAB14435.1| 504|Homo sapiens protein ( Homo sapiens
cDNA FLJ13093 fis, clone NT2RP3002151, highly similar to
G1 TO S PHASE TRANSITION PROTEIN 1 HOMOLOG. ).
Length = 504
Score = 33.1 bits (72), Expect = 0.92
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +3
Query: 555 PNEDG----ELTKKIPKKKPPRVEDTRSXKEHVNVVFIGHV 665
P E G E ++I K K V KEHVNVVFIGHV
Sbjct: 69 PEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHV 109
>AK001303-1|BAA91612.1| 628|Homo sapiens protein ( Homo sapiens
cDNA FLJ10441 fis, clone NT2RP1000733, highly similar to
Human mRNA for GSPT1-TK protein. ).
Length = 628
Score = 33.1 bits (72), Expect = 0.92
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +3
Query: 555 PNEDG----ELTKKIPKKKPPRVEDTRSXKEHVNVVFIGHV 665
P E G E ++I K K V KEHVNVVFIGHV
Sbjct: 172 PEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHV 212
>AJ251548-1|CAB91089.1| 628|Homo sapiens polypeptide chain release
factor 3b protein.
Length = 628
Score = 33.1 bits (72), Expect = 0.92
Identities = 20/41 (48%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +3
Query: 555 PNEDG----ELTKKIPKKKPPRVEDTRSXKEHVNVVFIGHV 665
P E G E ++I K K V KEHVNVVFIGHV
Sbjct: 172 PEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHV 212
>Y13619-1|CAA73941.1| 2070|Homo sapiens DFFRY protein.
Length = 2070
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +3
Query: 132 ENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSP 278
EN+ ++IG+ KD + +++K++ +N N +PS S S + ST SP
Sbjct: 945 ENDRKLIGQLNLKDKSLITAKLTQINFN----MPS-SPDSSSDSSTASP 988
>Y13618-1|CAA73940.1| 2555|Homo sapiens DFFRY protein.
Length = 2555
Score = 30.7 bits (66), Expect = 4.9
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +3
Query: 132 ENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSP 278
EN+ ++IG+ KD + +++K++ +N N +PS S S + ST SP
Sbjct: 945 ENDRKLIGQLNLKDKSLITAKLTQINFN----MPS-SPDSSSDSSTASP 988
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,940,316
Number of Sequences: 237096
Number of extensions: 1436364
Number of successful extensions: 5128
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5101
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -