Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_K12
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 33 0.18
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 33 0.24
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 32 0.32
AC024750-3|AAF60440.1| 384|Caenorhabditis elegans Hypothetical ... 31 0.98
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 27 9.1
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 27 9.1
AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in ... 27 9.1
AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in ... 27 9.1
AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in ... 27 9.1
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 27 9.1
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -1
Query: 314 IRRTAF*FLGGGRGIGTIASLRRLRKRRHEFHGIYIQRGN 195
I R A +L GRG I L R+ + + +F+G IQRGN
Sbjct: 63 IYRRATTYLAMGRGKAAIVDLERVLELKPDFYGARIQRGN 102
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 534 TQVGNTNPNEDGELTKKIPKKKPPRVE-DTRSXKEHVNVVFIGHV 665
T+ P + +L + KK V D + KEH+N+VF+GHV
Sbjct: 74 TEAPKKEPTPEEDLVAPLAKKFQRTVYVDDGTHKEHINMVFVGHV 118
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
protein T20F7.5 protein.
Length = 1065
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +3
Query: 90 SATIMSNNGAPDSWENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDST 269
S+ ++SN+ DS + + +++D+ S IST + + S S PS+ + S+
Sbjct: 245 SSAVLSNSNTSDSINTSEQNLESPRTSEASDILSTISTFTQENVSELQSISPPSEENGSS 304
Query: 270 DS 275
++
Sbjct: 305 EN 306
>AC024750-3|AAF60440.1| 384|Caenorhabditis elegans Hypothetical
protein Y17G9A.4 protein.
Length = 384
Score = 30.7 bits (66), Expect = 0.98
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +3
Query: 30 EQNLNNFN*PGKKTKLFILRSATIMSNN-GAPDSWENEAEIIGEKGAK---DSNDVSSKI 197
EQ + ++N PGK + + I RS S A D+ ENE +II +G D NDV K+
Sbjct: 122 EQYITSYN-PGK-SNIVIYRSHYWRSTTENAKDNIENEVKIICAEGLNKQPDYNDVPVKL 179
Query: 198 STLNVNAMEFVPSFSKPSQAS 260
S N+ FV K S
Sbjct: 180 SE-NLENSRFVGLMGKDLDVS 199
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 123 DSWENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSPTSPQ 290
D+ EN+ EI E + SSK+ST +N + + + DS D +P+
Sbjct: 999 DATENQPEITLELDVEKHEIDSSKVSTSTINLNDESMETRNTNDSKDSFDDEVNPR 1054
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 123 DSWENEAEIIGEKGAKDSNDVSSKISTLNVNAMEFVPSFSKPSQASDSTDSPTSPQ 290
D+ EN+ EI E + SSK+ST +N + + + DS D +P+
Sbjct: 999 DATENQPEITLELDVEKHEIDSSKVSTSTINLNDESMETRNTNDSKDSFDDEVNPR 1054
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 439 SGGTDAVVGGGSSTRGEADA 380
SGG+D+ VGGG T D+
Sbjct: 256 SGGSDSAVGGGGDTNASTDS 275
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 439 SGGTDAVVGGGSSTRGEADA 380
SGG+D+ VGGG T D+
Sbjct: 256 SGGSDSAVGGGGDTNASTDS 275
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 528 LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSXK 632
+D + N+N +DG TK+ P + P T+S K
Sbjct: 1069 VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 1103
>AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform b protein.
Length = 871
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 528 LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSXK 632
+D + N+N +DG TK+ P + P T+S K
Sbjct: 827 VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 861
>AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform d protein.
Length = 807
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 528 LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSXK 632
+D + N+N +DG TK+ P + P T+S K
Sbjct: 763 VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 797
>AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in germ
line developmentprotein 2, isoform c protein.
Length = 1036
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 528 LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSXK 632
+D + N+N +DG TK+ P + P T+S K
Sbjct: 992 VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 1026
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in germ
line developmentprotein 2, isoform a protein.
Length = 1113
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 528 LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSXK 632
+D + N+N +DG TK+ P + P T+S K
Sbjct: 1069 VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 1103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,652,323
Number of Sequences: 27780
Number of extensions: 228926
Number of successful extensions: 892
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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