BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fprWP01_F_K09 (655 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna bin... 90 1e-18 AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna bin... 89 3e-18 AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna bin... 89 3e-18 Z81130-2|CAB03417.1| 463|Caenorhabditis elegans Hypothetical pr... 78 5e-15 U20535-1|AAC46632.1| 463|Caenorhabditis elegans gld-1 protein. 78 5e-15 AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 76 2e-14 AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 76 2e-14 U10438-13|ABB88243.1| 235|Caenorhabditis elegans Hypothetical p... 60 2e-09 AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical... 54 9e-08 AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 50 2e-06 AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 50 2e-06 Z99281-18|CAD56258.1| 380|Caenorhabditis elegans Hypothetical p... 49 3e-06 AF047659-9|AAC04421.1| 254|Caenorhabditis elegans Hypothetical ... 47 1e-05 Z77132-1|CAB00859.1| 278|Caenorhabditis elegans Hypothetical pr... 42 5e-04 Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 35 0.044 Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 35 0.044 Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 35 0.044 U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. 30 1.6 AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess... 30 1.6 AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess... 30 1.6 Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 29 2.9 AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 29 2.9 U80453-5|AAK31443.1| 378|Caenorhabditis elegans Hypothetical pr... 28 6.7 Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 27 8.8 Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 27 8.8 >AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna binding protein) familyprotein 2, isoform c protein. Length = 445 Score = 90.2 bits (214), Expect = 1e-18 Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 5/169 (2%) Frame = +1 Query: 160 GYNSGDFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNN--SKFPLSMKL 333 G +SG + T + NG + + + EY+ +LL +K +L + F +L Sbjct: 37 GPSSGPPQVTITPSGVQSGSANGVSTSQQQQYSAEYLSQLLKDKKQLAAFPNVFHHLERL 96 Query: 334 IDQEVTKVQA---SGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNFVGKLLGPKGN 504 D+E+ KV+ +K+S + EHP +NFVG++LGP+G Sbjct: 97 ADEEINKVRVVLFQCEFSKESAPLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGM 156 Query: 505 TMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLXPKYSHLADDLHVEI 651 T KQL+++T CK+ V GRGSMRD++KEE R P + HL+++LHV I Sbjct: 157 TAKQLEQETGCKIMVRGRGSMRDKKKEELNRGK--PNWEHLSEELHVLI 203 >AF000197-8|AAB52897.2| 328|Caenorhabditis elegans Star (rna binding protein) familyprotein 2, isoform a protein. Length = 328 Score = 89.0 bits (211), Expect = 3e-18 Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 5/148 (3%) Frame = +1 Query: 223 NGEEGIKINEKAGEYMRELLSEKIKLNN--SKFPLSMKLIDQEVTKVQA---SGRITKDS 387 NG + + + EY+ +LL +K +L + F +L D+E+ KV+ +K+S Sbjct: 16 NGVSTSQQQQYSAEYLSQLLKDKKQLAAFPNVFHHLERLADEEINKVRVVLFQCEFSKES 75 Query: 388 KYVDVFRDXXXXXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSM 567 + EHP +NFVG++LGP+G T KQL+++T CK+ V GRGSM Sbjct: 76 APLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSM 135 Query: 568 RDRQKEEELRQSLXPKYSHLADDLHVEI 651 RD++KEE R P + HL+++LHV I Sbjct: 136 RDKKKEELNRGK--PNWEHLSEELHVLI 161 >AF000197-6|AAP68907.1| 403|Caenorhabditis elegans Star (rna binding protein) familyprotein 2, isoform b protein. Length = 403 Score = 89.0 bits (211), Expect = 3e-18 Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 5/148 (3%) Frame = +1 Query: 223 NGEEGIKINEKAGEYMRELLSEKIKLNN--SKFPLSMKLIDQEVTKVQA---SGRITKDS 387 NG + + + EY+ +LL +K +L + F +L D+E+ KV+ +K+S Sbjct: 16 NGVSTSQQQQYSAEYLSQLLKDKKQLAAFPNVFHHLERLADEEINKVRVVLFQCEFSKES 75 Query: 388 KYVDVFRDXXXXXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSM 567 + EHP +NFVG++LGP+G T KQL+++T CK+ V GRGSM Sbjct: 76 APLPDAEGDSTVHTEKVFVPAKEHPDYNFVGRILGPRGMTAKQLEQETGCKIMVRGRGSM 135 Query: 568 RDRQKEEELRQSLXPKYSHLADDLHVEI 651 RD++KEE R P + HL+++LHV I Sbjct: 136 RDKKKEELNRGK--PNWEHLSEELHVLI 161 >Z81130-2|CAB03417.1| 463|Caenorhabditis elegans Hypothetical protein T23G11.3 protein. Length = 463 Score = 78.2 bits (184), Expect = 5e-15 Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 3/135 (2%) Frame = +1 Query: 250 EKAGEYMRELLSEK--IKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKY-VDVFRDXXX 420 E EY+ +L+ EK + L F +L+D E+ +V+ + T+ + + Sbjct: 144 EATVEYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVRVALFQTEFPRVELPEPAGDMI 203 Query: 421 XXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQ 600 E+P +NFVG++LGP+G T KQL++DT CK+ V G+GSMRD+ KE R Sbjct: 204 SITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRG 263 Query: 601 SLXPKYSHLADDLHV 645 + HL DDLHV Sbjct: 264 K--ANWEHLEDDLHV 276 >U20535-1|AAC46632.1| 463|Caenorhabditis elegans gld-1 protein. Length = 463 Score = 78.2 bits (184), Expect = 5e-15 Identities = 48/135 (35%), Positives = 72/135 (53%), Gaps = 3/135 (2%) Frame = +1 Query: 250 EKAGEYMRELLSEK--IKLNNSKFPLSMKLIDQEVTKVQASGRITKDSKY-VDVFRDXXX 420 E EY+ +L+ EK + L F +L+D E+ +V+ + T+ + + Sbjct: 144 EATVEYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVRVALFQTEFPRVELPEPAGDMI 203 Query: 421 XXXXXXXXXXXEHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQ 600 E+P +NFVG++LGP+G T KQL++DT CK+ V G+GSMRD+ KE R Sbjct: 204 SITEKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRG 263 Query: 601 SLXPKYSHLADDLHV 645 + HL DDLHV Sbjct: 264 K--ANWEHLEDDLHV 276 >AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical protein E02D9.1b protein. Length = 315 Score = 76.2 bits (179), Expect = 2e-14 Identities = 32/65 (49%), Positives = 47/65 (72%) Frame = +1 Query: 457 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLXPKYSHLADD 636 HP FNF+GK+LGPKG T++ L + C + +LGRGS +DR+KE EL S P+++H + Sbjct: 140 HPNFNFIGKVLGPKGATLQTLCKTHKCHIYILGRGSTKDREKEAELLASGDPQHAHFSGP 199 Query: 637 LHVEI 651 LHV++ Sbjct: 200 LHVKV 204 >AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical protein E02D9.1c protein. Length = 317 Score = 76.2 bits (179), Expect = 2e-14 Identities = 32/65 (49%), Positives = 47/65 (72%) Frame = +1 Query: 457 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLXPKYSHLADD 636 HP FNF+GK+LGPKG T++ L + C + +LGRGS +DR+KE EL S P+++H + Sbjct: 140 HPNFNFIGKVLGPKGATLQTLCKTHKCHIYILGRGSTKDREKEAELLASGDPQHAHFSGP 199 Query: 637 LHVEI 651 LHV++ Sbjct: 200 LHVKV 204 >U10438-13|ABB88243.1| 235|Caenorhabditis elegans Hypothetical protein B0280.17 protein. Length = 235 Score = 59.7 bits (138), Expect = 2e-09 Identities = 27/62 (43%), Positives = 43/62 (69%) Frame = +1 Query: 469 NFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLXPKYSHLADDLHVE 648 N VG+L+GP+G T++QL++D CK+ + G+G +D KEE LR+ + + HL + +HV Sbjct: 129 NPVGRLIGPRGMTIRQLEKDLGCKLFIRGKGCTKDDAKEERLRERVG--WEHLKEPIHVM 186 Query: 649 IS 654 IS Sbjct: 187 IS 188 >AC084158-25|AAM15620.2| 384|Caenorhabditis elegans Hypothetical protein Y69A2AR.32a protein. Length = 384 Score = 54.0 bits (124), Expect = 9e-08 Identities = 24/56 (42%), Positives = 39/56 (69%) Frame = +1 Query: 454 EHPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLXPKYS 621 ++PK+NFVG++LGP+G T+KQL+++T C++ V GR S E + +S P +S Sbjct: 81 KYPKYNFVGRILGPRGMTVKQLEKETGCRIFVRGRASTTASNPESKPNKS-TPSFS 135 >AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical protein Y116A8C.32 protein. Length = 699 Score = 49.6 bits (113), Expect = 2e-06 Identities = 27/93 (29%), Positives = 46/93 (49%) Frame = +1 Query: 295 KLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 474 +LN + +L K+QA +I + K +R + P NF Sbjct: 260 RLNTREVRKRQELEQLRHEKIQALLKINPNFKPPADYRAPNIRLHDKVWIPQEQFPDLNF 319 Query: 475 VGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 573 VG L+GP+GNT+K L+ +T K+ + G+GS+++ Sbjct: 320 VGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKE 352 >AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein protein. Length = 699 Score = 49.6 bits (113), Expect = 2e-06 Identities = 27/93 (29%), Positives = 46/93 (49%) Frame = +1 Query: 295 KLNNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNF 474 +LN + +L K+QA +I + K +R + P NF Sbjct: 260 RLNTREVRKRQELEQLRHEKIQALLKINPNFKPPADYRAPNIRLHDKVWIPQEQFPDLNF 319 Query: 475 VGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRD 573 VG L+GP+GNT+K L+ +T K+ + G+GS+++ Sbjct: 320 VGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKE 352 >Z99281-18|CAD56258.1| 380|Caenorhabditis elegans Hypothetical protein Y57G11C.36 protein. Length = 380 Score = 48.8 bits (111), Expect = 3e-06 Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 3/147 (2%) Frame = +1 Query: 127 LIKMADKYDKNGYNSGDFKRNTTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKL-- 300 L+++A+K+ + + ++ + + + +E K Y+ L EK +L Sbjct: 14 LLRLAEKHQHSSLLTPPPSDDSQKSLKSTSNHSDQEMSKNLHDVEAYIDALKGEKHQLAQ 73 Query: 301 -NNSKFPLSMKLIDQEVTKVQASGRITKDSKYVDVFRDXXXXXXXXXXXXXXEHPKFNFV 477 ++ F LID+E+ KV + S+ + P +NFV Sbjct: 74 YSSGGFNHVFNLIDKEIQKVGGNDAHDGGSQ----MSGDGSMLTETIMVPVEKFPDYNFV 129 Query: 478 GKLLGPKGNTMKQLQEDTLCKMAVLGR 558 G+LLGP+G T KQL+ T C++ +LGR Sbjct: 130 GRLLGPRGTTAKQLEVTTGCRITILGR 156 >AF047659-9|AAC04421.1| 254|Caenorhabditis elegans Hypothetical protein K07H8.9 protein. Length = 254 Score = 47.2 bits (107), Expect = 1e-05 Identities = 16/36 (44%), Positives = 28/36 (77%) Frame = +1 Query: 457 HPKFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGS 564 +P +NF+G+++GP+G T KQL++DT C++ + G S Sbjct: 132 YPTYNFIGRIIGPRGTTAKQLEKDTGCRIMIRGNHS 167 >Z77132-1|CAB00859.1| 278|Caenorhabditis elegans Hypothetical protein F54D1.1 protein. Length = 278 Score = 41.5 bits (93), Expect = 5e-04 Identities = 18/61 (29%), Positives = 36/61 (59%) Frame = +1 Query: 463 KFNFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLXPKYSHLADDLH 642 K N++G++LGP G + + ++ + + G GS+R++ +E +R+ + HL + LH Sbjct: 151 KCNYIGRILGPSGMSARMIENQYDVTLLIRGAGSVRNKAMDERVRK----RNEHLEEPLH 206 Query: 643 V 645 V Sbjct: 207 V 207 >Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical protein C12D8.1c protein. Length = 548 Score = 35.1 bits (77), Expect = 0.044 Identities = 21/61 (34%), Positives = 34/61 (55%) Frame = +1 Query: 469 NFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLXPKYSHLADDLHVE 648 N G ++G G+T++QLQE + CKM +L + + + + LR + P+ LA L E Sbjct: 101 NRCGLIIGKSGDTIRQLQEKSGCKM-ILVQDNQSVSDQSKPLRITGDPQKIELAKQLVAE 159 Query: 649 I 651 I Sbjct: 160 I 160 >Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical protein C12D8.1b protein. Length = 611 Score = 35.1 bits (77), Expect = 0.044 Identities = 21/61 (34%), Positives = 34/61 (55%) Frame = +1 Query: 469 NFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLXPKYSHLADDLHVE 648 N G ++G G+T++QLQE + CKM +L + + + + LR + P+ LA L E Sbjct: 164 NRCGLIIGKSGDTIRQLQEKSGCKM-ILVQDNQSVSDQSKPLRITGDPQKIELAKQLVAE 222 Query: 649 I 651 I Sbjct: 223 I 223 >Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical protein C12D8.1a protein. Length = 589 Score = 35.1 bits (77), Expect = 0.044 Identities = 21/61 (34%), Positives = 34/61 (55%) Frame = +1 Query: 469 NFVGKLLGPKGNTMKQLQEDTLCKMAVLGRGSMRDRQKEEELRQSLXPKYSHLADDLHVE 648 N G ++G G+T++QLQE + CKM +L + + + + LR + P+ LA L E Sbjct: 142 NRCGLIIGKSGDTIRQLQEKSGCKM-ILVQDNQSVSDQSKPLRITGDPQKIELAKQLVAE 200 Query: 649 I 651 I Sbjct: 201 I 201 >U67864-1|AAC47313.1| 415|Caenorhabditis elegans MEX-3 protein. Length = 415 Score = 29.9 bits (64), Expect = 1.6 Identities = 11/19 (57%), Positives = 17/19 (89%) Frame = +1 Query: 475 VGKLLGPKGNTMKQLQEDT 531 VG ++GPKG T+K++Q+DT Sbjct: 148 VGLVVGPKGATIKRIQQDT 166 >AF003139-9|AAK73872.1| 415|Caenorhabditis elegans Muscle excess protein 3, isoform a protein. Length = 415 Score = 29.9 bits (64), Expect = 1.6 Identities = 11/19 (57%), Positives = 17/19 (89%) Frame = +1 Query: 475 VGKLLGPKGNTMKQLQEDT 531 VG ++GPKG T+K++Q+DT Sbjct: 148 VGLVVGPKGATIKRIQQDT 166 >AF003139-8|AAK73873.2| 443|Caenorhabditis elegans Muscle excess protein 3, isoform b protein. Length = 443 Score = 29.9 bits (64), Expect = 1.6 Identities = 11/19 (57%), Positives = 17/19 (89%) Frame = +1 Query: 475 VGKLLGPKGNTMKQLQEDT 531 VG ++GPKG T+K++Q+DT Sbjct: 176 VGLVVGPKGATIKRIQQDT 194 >Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical protein C14B1.6 protein. Length = 793 Score = 29.1 bits (62), Expect = 2.9 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -3 Query: 569 LIEPLPSTAILHSVSSCNCFIVFPF 495 L+EP+ I H V CNC++ PF Sbjct: 746 LLEPIYRAYINHFVDECNCYLKGPF 770 >AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome regulatory particle,non-atpase-like protein 1 protein. Length = 981 Score = 29.1 bits (62), Expect = 2.9 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = +1 Query: 190 TTQGKPEELDQNGEEGIKINEKAGEYMRELLSEKIKLNNSKFPLSMKLIDQEVTKVQAS 366 TTQ P+E D+ + K+ EKA E+ E KL L +L + + T + S Sbjct: 4 TTQQTPKEADKKKADDKKVPEKAEPKKEEMSEEDQKLEEDLNLLVQRLSEPDTTLYKPS 62 >U80453-5|AAK31443.1| 378|Caenorhabditis elegans Hypothetical protein C23H3.3 protein. Length = 378 Score = 27.9 bits (59), Expect = 6.7 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = +1 Query: 472 FVGKLLGPKGNTMKQLQEDTLCKM 543 F+GKL+G T+ L+ +T C++ Sbjct: 111 FIGKLIGTNRRTLNSLENETQCRV 134 >Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical protein T05C12.10 protein. Length = 1169 Score = 27.5 bits (58), Expect = 8.8 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +1 Query: 154 KNGYNSGDFKRNTTQGKPEELDQNGE-EGIKINEKAG 261 K+G SGD K N G + D+NG+ G N+K+G Sbjct: 683 KSGDGSGDGKNNGNGGTGDGKDKNGKGSGSGDNDKSG 719 >Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical protein T05C12.10 protein. Length = 1169 Score = 27.5 bits (58), Expect = 8.8 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +1 Query: 154 KNGYNSGDFKRNTTQGKPEELDQNGE-EGIKINEKAG 261 K+G SGD K N G + D+NG+ G N+K+G Sbjct: 683 KSGDGSGDGKNNGNGGTGDGKDKNGKGSGSGDNDKSG 719 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,016,354 Number of Sequences: 27780 Number of extensions: 252680 Number of successful extensions: 634 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 610 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 629 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1455289764 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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