Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_K03
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53338-5|AAA96193.1|  463|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U58750-1|AAB00641.1|  307|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z69883-1|CAA93743.1|  829|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>U53338-5|AAA96193.1|  463|Caenorhabditis elegans Hypothetical
           protein C05E11.7 protein.
          Length = 463

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +3

Query: 195 LSMHPKSDIQIDLTQVRIDILQGIRECNSRGLV-QTTKWLAELNYALR---DHKITSEEP 362
           LS+   +  Q+D  +    ++   +ECNSRGL+     W++E N       D K  +E  
Sbjct: 119 LSLPASTGCQLDDNEYGKQVISCKKECNSRGLICMMRTWISEQNTCTMKDIDQKCGAEAA 178

Query: 363 SXISE 377
           S   E
Sbjct: 179 SLFQE 183


>U58750-1|AAB00641.1|  307|Caenorhabditis elegans Hypothetical
           protein F55G1.7 protein.
          Length = 307

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = -3

Query: 376 SEIXEGSSEVIL---WSLKA*FNSASHFVVCTRPRLLHSRI 263
           S +   S EV+L   W +    N  S F+VC R  LL+SRI
Sbjct: 45  STLQSSSDEVLLPLYWKMAENPNVPSRFMVCLRESLLNSRI 85


>Z69883-1|CAA93743.1|  829|Caenorhabditis elegans Hypothetical
           protein C27C12.7 protein.
          Length = 829

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 451 RAAHFLENCTSSKCVFLHKYSLYMSSEKKRLDNATDL 561
           +A ++  N +S+  V++H Y+LY   + ++ D A  L
Sbjct: 202 QAFYWNPNASSNDFVYVHNYNLYYQKDPEKPDGAIQL 238


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,753,138
Number of Sequences: 27780
Number of extensions: 264153
Number of successful extensions: 641
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)