Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_K02
(342 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0339 - 22400534-22400647,22401264-22401398,22401491-224015... 64 3e-11
08_02_1576 + 27965862-27965864,27965952-27966026,27966113-279662... 64 4e-11
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 40 4e-04
07_02_0028 + 11964941-11964991,11965259-11966101,11966249-119665... 32 0.14
12_01_0890 + 8591718-8591720,8591809-8591919,8592001-8592525 30 0.41
05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422 30 0.55
11_04_0025 + 12382485-12382823,12382835-12382894,12382960-123830... 29 0.72
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 29 0.72
03_05_0350 + 23368111-23368219,23368519-23368526,23368650-233686... 29 0.95
02_02_0584 - 11853149-11853573,11853673-11853787,11853868-118539... 29 1.3
06_01_0165 + 1288107-1290476 28 1.7
03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635 28 2.2
12_01_0864 - 8205371-8205913,8206304-8206452,8206677-8206737,820... 27 3.9
03_06_0576 + 34832900-34832911,34833006-34833122,34833752-348338... 27 3.9
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 27 3.9
03_01_0081 + 645214-645228,645791-645856,645973-646142,646265-64... 27 5.1
02_02_0618 - 12190727-12191698 26 8.9
>09_06_0339 -
22400534-22400647,22401264-22401398,22401491-22401565,
22401646-22401648
Length = 108
Score = 64.1 bits (149), Expect = 3e-11
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = +1
Query: 133 YKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRAT 279
YK ITP+V+SERL++ GSLARRA+ +L ++GLI+ V H Q IYTRAT
Sbjct: 58 YKQITPSVLSERLRINGSLARRAMKDLMDRGLIRMVSVHCSQQIYTRAT 106
Score = 36.7 bits (81), Expect = 0.005
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +3
Query: 60 RDKLNNQVLFDKPTYEKLYKEVPQ 131
++K+NN VLFD+ TY+KL EVP+
Sbjct: 34 KEKVNNSVLFDQATYDKLLSEVPK 57
>08_02_1576 +
27965862-27965864,27965952-27966026,27966113-27966247,
27967080-27967193
Length = 108
Score = 63.7 bits (148), Expect = 4e-11
Identities = 30/49 (61%), Positives = 38/49 (77%)
Frame = +1
Query: 133 YKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRAT 279
YK ITP+V+SERL++ GSLARRA+ +L +GLI+ V H Q IYTRAT
Sbjct: 58 YKQITPSVLSERLRINGSLARRAINDLMTRGLIRMVSVHSSQQIYTRAT 106
Score = 36.7 bits (81), Expect = 0.005
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +3
Query: 60 RDKLNNQVLFDKPTYEKLYKEVPQ 131
++K+NN VLFD+ TY+KL EVP+
Sbjct: 34 KEKVNNSVLFDQATYDKLLSEVPK 57
>11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 40.3 bits (90), Expect = 4e-04
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 175 VRGSLARRALIELREKGLIKQVVQHHGQVIYTRAT 279
+ GSLAR+A+ +L +G I+ V H Q+IYTRAT
Sbjct: 1090 INGSLARQAIKDLESRGAIRVVSVHSSQLIYTRAT 1124
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 60 RDKLNNQVLFDKPTYEKLYKEVPQ 131
++K+NN VLFDK TY+KL EVP+
Sbjct: 968 KEKVNNSVLFDKATYDKLLSEVPK 991
>07_02_0028 +
11964941-11964991,11965259-11966101,11966249-11966560,
11966640-11967073,11967500-11967941
Length = 693
Score = 31.9 bits (69), Expect = 0.14
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 142 ITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 288
+TPAV E+ + + AR+ L + RE I+ +QH+ Q+++ +K D
Sbjct: 613 LTPAVYLEQHRFKLEKARQRLTDHRECQNIEATIQHNQQLVHVEKSKLD 661
>12_01_0890 + 8591718-8591720,8591809-8591919,8592001-8592525
Length = 212
Score = 30.3 bits (65), Expect = 0.41
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 142 ITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 288
ITPAV E+ + + A++ L + RE+ I+ +Q + Q++Y +K D
Sbjct: 116 ITPAVYLEQHQFKLERAKQRLADRRERMDIEATIQANRQLVYEEKSKLD 164
>05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422
Length = 259
Score = 29.9 bits (64), Expect = 0.55
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +1
Query: 139 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 288
++TPA E+ + + A++ L+E RE+ I+ +Q + Q+++ +K D
Sbjct: 167 VLTPAAYFEQHQFKLEKAKQRLVERRERKEIEATIQANRQLVHEEKSKLD 216
>11_04_0025 +
12382485-12382823,12382835-12382894,12382960-12383073,
12383187-12383837
Length = 387
Score = 29.5 bits (63), Expect = 0.72
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = +1
Query: 139 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 288
+ITPA+ E+ + + A++ + + RE+ +I+ +Q + Q+++ K D
Sbjct: 237 IITPAIYLEQHQFKLEKAQQRIADRRERKVIEATIQANRQLVHEEKAKLD 286
>01_05_0662 -
24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 29.5 bits (63), Expect = 0.72
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 68 LVTNFSFGPLLLLGFAATGSFL 3
+V + +FGPL LL FAA G F+
Sbjct: 662 MVVSHTFGPLSLLAFAALGGFI 683
>03_05_0350 +
23368111-23368219,23368519-23368526,23368650-23368658,
23368768-23368839,23368978-23369097,23369638-23370058,
23370131-23370285,23370461-23370625,23370822-23370825,
23371739-23371799,23371933-23372035,23372422-23372854,
23372978-23373120,23373608-23373740,23375567-23375576,
23375852-23375975,23376595-23377012,23377153-23377343,
23377569-23377811
Length = 973
Score = 29.1 bits (62), Expect = 0.95
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 155 SYLKD*RSEVPWREEHSSSLGKKVSSNR*SNTMGR*STHVRPR 283
SY + W ++ SSS G K+ + R SNT + S + PR
Sbjct: 517 SYHDQPKGNKHWMQKDSSSKGNKIGNTRSSNTPSKFSGCILPR 559
>02_02_0584 -
11853149-11853573,11853673-11853787,11853868-11853981,
11854049-11854108,11854265-11854600,11854681-11854724,
11854776-11855507,11855736-11855921,11856012-11856153,
11856250-11856300
Length = 734
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 139 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 288
++TPAV E+ + + A+ L E RE+ I+ +Q + Q+++ +K D
Sbjct: 599 ILTPAVYLEQHQFKLKKAKLRLAERRERKDIEATIQANRQLVHEEKSKLD 648
>06_01_0165 + 1288107-1290476
Length = 789
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2
Query: 251 WCWTTCLMRPFSLSSMSALLAREPRTFNLSDTTAGVISLXLW 126
W + C++ + + S+ L AR P+ LS T +I +W
Sbjct: 459 WEFIVCILSNWFMVSLIHLYARNPQRSRLSPTFKAIIRRIIW 500
>03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635
Length = 603
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 236 CLMRPFSLSSMSALLAREPRTFNL 165
C +RP S +++ AL+AR PR L
Sbjct: 217 CYVRPVSFAALEALVARSPRLTRL 240
>12_01_0864 -
8205371-8205913,8206304-8206452,8206677-8206737,
8206815-8206917,8207197-8207492
Length = 383
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +1
Query: 139 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 288
++TP V E+ + + A+ L E RE+ I+ +Q + Q+++ +K D
Sbjct: 280 ILTPGVYLEQHQFKLEKAKLRLAERRERKDIEATIQANRQLVHEEKSKLD 329
>03_06_0576 +
34832900-34832911,34833006-34833122,34833752-34833810,
34833901-34833960,34834197-34834250,34834332-34834380,
34834493-34834540,34834889-34834954,34835591-34835641,
34835732-34835851,34835921-34836005,34836428-34836509,
34836666-34836774,34837005-34837051,34837131-34837188,
34839114-34839220,34839700-34839765,34839833-34839879,
34839977-34840042,34840146-34840243,34840344-34840469,
34840551-34840835,34840920-34840985,34841079-34841228
Length = 675
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 175 VRGSLARRALIELREKGLIKQVVQHHGQVIYT 270
+RG +RAL +R+ G I++VVQ+ Q Y+
Sbjct: 239 IRGIGGQRALKLIRQHGYIEEVVQNLSQTRYS 270
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 68 LVTNFSFGPLLLLGFAATGSFL 3
+V + +FGPL LL F A G F+
Sbjct: 710 MVVSQTFGPLSLLAFTALGGFI 731
>03_01_0081 +
645214-645228,645791-645856,645973-646142,646265-646319,
646434-646499,646604-646687,647091-647168,647425-647508,
648000-648302,648402-648572,649098-649288,649406-649808,
650368-650619,650696-651196,651306-651403,651810-651911,
652016-652178
Length = 933
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 63 DKLNNQVLFDKPTYEKLYKEVPQXQANHTCC 155
DKL NQ+ T KL P N +CC
Sbjct: 818 DKLENQIDIALDTVNKLRSLKPPTDTNESCC 848
>02_02_0618 - 12190727-12191698
Length = 323
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 200 ALLAREPRTFNLSDTTAGVISLXL 129
A++A PRT + D AGV L L
Sbjct: 220 AMIAETPRTIEIEDMEAGVFRLLL 243
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,652,450
Number of Sequences: 37544
Number of extensions: 187803
Number of successful extensions: 512
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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