Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_K02
(342 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein. 81 7e-16
BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25 p... 81 7e-16
BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25 p... 81 7e-16
BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25 p... 81 7e-16
AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25 p... 81 7e-16
AK097034-1|BAC04932.1| 120|Homo sapiens protein ( Homo sapiens ... 31 1.2
BC110844-1|AAI10845.1| 201|Homo sapiens DLG2 protein protein. 29 2.9
BC104969-1|AAI04970.1| 202|Homo sapiens DLG2 protein protein. 29 2.9
AK125152-1|BAC86065.1| 202|Homo sapiens protein ( Homo sapiens ... 29 2.9
AK125151-1|BAC86064.1| 202|Homo sapiens protein ( Homo sapiens ... 29 2.9
>M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein.
Length = 125
Score = 81.4 bits (192), Expect = 7e-16
Identities = 42/56 (75%), Positives = 44/56 (78%)
Frame = +1
Query: 133 YKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDDPVA 300
YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H QVIYTR TKG D A
Sbjct: 65 YKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +3
Query: 57 VRDKLNNQVLFDKPTYEKLYKEVP 128
VRDKLNN VLFDK TY+KL KEVP
Sbjct: 40 VRDKLNNLVLFDKATYDKLCKEVP 63
>BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 81.4 bits (192), Expect = 7e-16
Identities = 42/56 (75%), Positives = 44/56 (78%)
Frame = +1
Query: 133 YKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDDPVA 300
YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H QVIYTR TKG D A
Sbjct: 65 YKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +3
Query: 57 VRDKLNNQVLFDKPTYEKLYKEVP 128
VRDKLNN VLFDK TY+KL KEVP
Sbjct: 40 VRDKLNNLVLFDKATYDKLCKEVP 63
>BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 81.4 bits (192), Expect = 7e-16
Identities = 42/56 (75%), Positives = 44/56 (78%)
Frame = +1
Query: 133 YKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDDPVA 300
YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H QVIYTR TKG D A
Sbjct: 65 YKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +3
Query: 57 VRDKLNNQVLFDKPTYEKLYKEVP 128
VRDKLNN VLFDK TY+KL KEVP
Sbjct: 40 VRDKLNNLVLFDKATYDKLCKEVP 63
>BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 81.4 bits (192), Expect = 7e-16
Identities = 42/56 (75%), Positives = 44/56 (78%)
Frame = +1
Query: 133 YKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDDPVA 300
YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H QVIYTR TKG D A
Sbjct: 65 YKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +3
Query: 57 VRDKLNNQVLFDKPTYEKLYKEVP 128
VRDKLNN VLFDK TY+KL KEVP
Sbjct: 40 VRDKLNNLVLFDKATYDKLCKEVP 63
>AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 81.4 bits (192), Expect = 7e-16
Identities = 42/56 (75%), Positives = 44/56 (78%)
Frame = +1
Query: 133 YKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDDPVA 300
YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H QVIYTR TKG D A
Sbjct: 65 YKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +3
Query: 57 VRDKLNNQVLFDKPTYEKLYKEVP 128
VRDKLNN VLFDK TY+KL KEVP
Sbjct: 40 VRDKLNNLVLFDKATYDKLCKEVP 63
>AK097034-1|BAC04932.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ39715 fis, clone SMINT2013228. ).
Length = 120
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 129 VGLPCTVSHTWVYQTTPGCSTCH 61
+GL T +HTW Y+ P CS C+
Sbjct: 20 LGLLHTHTHTWYYRCEPTCSACY 42
>BC110844-1|AAI10845.1| 201|Homo sapiens DLG2 protein protein.
Length = 201
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -2
Query: 260 TCPWCWTTCLMRPFSLSSMSALLAREPRT-FNLSDTTAGVISLXLWDFLVQFLIRGFIKQ 84
+C WC+ +C S + +SAL P++ F+LS G+ L +V L G ++
Sbjct: 45 SCNWCYFSCSGTMCSTTGVSAL----PKSKFHLSAKCRGICFLLSSHRIVGHLFAGLLRD 100
Query: 83 HLVVQLVTNF 54
L + L F
Sbjct: 101 FLAIYLQAFF 110
>BC104969-1|AAI04970.1| 202|Homo sapiens DLG2 protein protein.
Length = 202
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -2
Query: 260 TCPWCWTTCLMRPFSLSSMSALLAREPRT-FNLSDTTAGVISLXLWDFLVQFLIRGFIKQ 84
+C WC+ +C S + +SAL P++ F+LS G+ L +V L G ++
Sbjct: 45 SCNWCYFSCSGTMCSTTGVSAL----PKSKFHLSAKCRGICFLLSSHRIVGHLFAGLLRD 100
Query: 83 HLVVQLVTNF 54
L + L F
Sbjct: 101 FLAIYLQAFF 110
>AK125152-1|BAC86065.1| 202|Homo sapiens protein ( Homo sapiens
cDNA FLJ43162 fis, clone FCBBF2007510. ).
Length = 202
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -2
Query: 260 TCPWCWTTCLMRPFSLSSMSALLAREPRT-FNLSDTTAGVISLXLWDFLVQFLIRGFIKQ 84
+C WC+ +C S + +SAL P++ F+LS G+ L +V L G ++
Sbjct: 45 SCNWCYFSCSGTMCSTTGVSAL----PKSKFHLSAKCRGICFLLSSHRIVGHLFAGLLRD 100
Query: 83 HLVVQLVTNF 54
L + L F
Sbjct: 101 FLAIYLQAFF 110
>AK125151-1|BAC86064.1| 202|Homo sapiens protein ( Homo sapiens
cDNA FLJ43161 fis, clone FCBBF2001183. ).
Length = 202
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -2
Query: 260 TCPWCWTTCLMRPFSLSSMSALLAREPRT-FNLSDTTAGVISLXLWDFLVQFLIRGFIKQ 84
+C WC+ +C S + +SAL P++ F+LS G+ L +V L G ++
Sbjct: 45 SCNWCYFSCSGTMCSTTGVSAL----PKSKFHLSAKCRGICFLLSSHRIVGHLFAGLLRD 100
Query: 83 HLVVQLVTNF 54
L + L F
Sbjct: 101 FLAIYLQAFF 110
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,870,672
Number of Sequences: 237096
Number of extensions: 1138559
Number of successful extensions: 2210
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2210
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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