Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_J23
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D57960 Cluster: PREDICTED: similar to CG10161-PB... 173 3e-42
UniRef50_O15371 Cluster: Eukaryotic translation initiation facto... 151 1e-35
UniRef50_Q9VGC7 Cluster: CG4810-PA; n=6; Coelomata|Rep: CG4810-P... 118 9e-26
UniRef50_Q5DAD4 Cluster: SJCHGC06210 protein; n=1; Schistosoma j... 100 3e-20
UniRef50_Q554U9 Cluster: EIF-3 zeta; n=2; Dictyostelium discoide... 77 4e-13
UniRef50_O94236 Cluster: Eukaryotic translation initiation facto... 67 4e-10
UniRef50_P30642 Cluster: Putative eukaryotic translation initiat... 64 4e-09
UniRef50_Q5KMK1 Cluster: Eukaryotic translation initiation facto... 63 6e-09
UniRef50_Q6C1N1 Cluster: Yarrowia lipolytica chromosome F of str... 54 3e-06
UniRef50_Q1E4Z3 Cluster: Eukaryotic translation initiation facto... 53 7e-06
UniRef50_A6SJW6 Cluster: Translation initiation factor eIF3; n=2... 46 0.001
UniRef50_Q8CJ77 Cluster: Ligand-independent activating molecule ... 37 0.49
UniRef50_Q2RB72 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q98FQ0 Cluster: Spermidine/putrescine ABC transporter, ... 34 3.4
UniRef50_Q8DGT9 Cluster: Acyl-[acyl-carrier-protein]--UDP-N-acet... 33 4.5
UniRef50_A4XKR6 Cluster: Peptidase M56, BlaR1 precursor; n=3; Cl... 33 4.5
UniRef50_A0KMU6 Cluster: Oligopeptide transport ATP-binding prot... 33 4.5
UniRef50_A6L194 Cluster: Putative outer membrane protein, probab... 33 6.0
>UniRef50_UPI0000D57960 Cluster: PREDICTED: similar to CG10161-PB;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG10161-PB - Tribolium castaneum
Length = 228
Score = 173 bits (421), Expect = 3e-42
Identities = 76/92 (82%), Positives = 84/92 (91%), Gaps = 3/92 (3%)
Frame = +3
Query: 150 RFISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWT--MVQDKKYQNKYASQ 323
+F++P+IQDNPTGWGP E+PDQF+DMPYQPFSKGDRLGKISDWT QDKKY NKYASQ
Sbjct: 12 KFVAPVIQDNPTGWGPCELPDQFKDMPYQPFSKGDRLGKISDWTGAAFQDKKYANKYASQ 71
Query: 324 FGAGSSYAYFHDEDESTFHLVDTTRVQK-PYQ 416
FG+GS YAY+HDEDESTFHLVDTTRVQK PYQ
Sbjct: 72 FGSGSQYAYYHDEDESTFHLVDTTRVQKPPYQ 103
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +1
Query: 553 MKIRDASVTVRPTWVTIEDMDFPRLAKLSLPGI 651
+KIRDASVTV+P WVTIE+MDFPRL KLSLP +
Sbjct: 121 IKIRDASVTVKPDWVTIEEMDFPRLGKLSLPNV 153
>UniRef50_O15371 Cluster: Eukaryotic translation initiation factor 3
subunit 7; n=40; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 7 - Homo sapiens (Human)
Length = 548
Score = 151 bits (366), Expect = 1e-35
Identities = 63/88 (71%), Positives = 76/88 (86%), Gaps = 2/88 (2%)
Frame = +3
Query: 150 RFISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWT--MVQDKKYQNKYASQ 323
+F++P+IQDNP+GWGP +P+QFRDMPYQPFSKGDRLGK++DWT QDK+Y NKY+SQ
Sbjct: 3 KFMTPVIQDNPSGWGPCAVPEQFRDMPYQPFSKGDRLGKVADWTGATYQDKRYTNKYSSQ 62
Query: 324 FGAGSSYAYFHDEDESTFHLVDTTRVQK 407
FG GS YAYFH+EDES+F LVDT R QK
Sbjct: 63 FGGGSQYAYFHEEDESSFQLVDTARTQK 90
Score = 38.7 bits (86), Expect = 0.12
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 496 LNKPRERKLGKR--WGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKL 636
L K +++ G R W Q+ K RD+SV VR W E+MDFP+L K+
Sbjct: 136 LQKKFQKQFGVRQKWDQKS--QKPRDSSVEVRSDWEVKEEMDFPQLMKM 182
>UniRef50_Q9VGC7 Cluster: CG4810-PA; n=6; Coelomata|Rep: CG4810-PA -
Drosophila melanogaster (Fruit fly)
Length = 551
Score = 118 bits (285), Expect = 9e-26
Identities = 55/91 (60%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
Frame = +3
Query: 153 FISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWT-MVQDKKYQNKYASQFG 329
FI P ++ N GWGP E+P+ D+PYQPF K DRLGKI DWT MV +KK+ +KYAS FG
Sbjct: 7 FIKPYVEYNEHGWGPCEVPEL--DVPYQPFCKSDRLGKICDWTAMVPEKKFPSKYASTFG 64
Query: 330 AGSSYAYFHDEDESTFHLVDTT--RVQKPYQ 416
S YAYF+++D+STFHLVDTT + KPYQ
Sbjct: 65 NNSQYAYFYEDDDSTFHLVDTTGSKATKPYQ 95
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = +1
Query: 499 NKPRERKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSLPGI 651
N + +G+R+G R AP +IR++SV V+ WV+IE++DFPRL KL+LP I
Sbjct: 143 NTRNTQNMGRRFG-RNAPTRIRESSVMVQSDWVSIEEIDFPRLLKLALPNI 192
>UniRef50_Q5DAD4 Cluster: SJCHGC06210 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06210 protein - Schistosoma
japonicum (Blood fluke)
Length = 648
Score = 100 bits (240), Expect = 3e-20
Identities = 46/100 (46%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Frame = +3
Query: 114 MSEHVLPAEGPMRFISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWT--MV 287
M HVLP G + + +NP GWGP ++P +F++MP+QPFSK RLG+++DW+ +
Sbjct: 1 MKAHVLPEFGSLS-----LNENPAGWGPTDIPMEFKNMPFQPFSKDTRLGRVADWSGNIF 55
Query: 288 QDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTTRVQK 407
QD K + +Y S F GS YAY+HDED++ F LV + R K
Sbjct: 56 QDMKTKGRYISPF-VGSQYAYYHDEDDNNFQLVSSVRETK 94
Score = 44.4 bits (100), Expect = 0.002
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +1
Query: 523 GKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSLPGI 651
G +R A +RDAS+ ++ W +E++DF RL+KL+LP +
Sbjct: 184 GSNSDRRQAHRAVRDASIQIKDNWTMLEELDFTRLSKLALPNV 226
>UniRef50_Q554U9 Cluster: EIF-3 zeta; n=2; Dictyostelium
discoideum|Rep: EIF-3 zeta - Dictyostelium discoideum
AX4
Length = 527
Score = 77.0 bits (181), Expect = 4e-13
Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +3
Query: 168 IQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDW-TMVQDKKYQNKYASQFGAGSSY 344
I+ NPTGWGP ++F D+PY PFSKGD++GK SDW + V++ + QN Y S A + +
Sbjct: 8 IKVNPTGWGPVGKLEKFTDIPYAPFSKGDKIGKCSDWNSNVRNYQRQN-YGS--NAFNPF 64
Query: 345 AYFHDEDESTFHLVDTTRVQ 404
+ ++DE +F LVD TRVQ
Sbjct: 65 TFKLEDDEDSFTLVDYTRVQ 84
>UniRef50_O94236 Cluster: Eukaryotic translation initiation factor 3
subunit 7 homolog; n=3; Schizosaccharomyces pombe|Rep:
Eukaryotic translation initiation factor 3 subunit 7
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 567
Score = 66.9 bits (156), Expect = 4e-10
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Frame = +3
Query: 153 FISPIIQDNPTGWGPYEMPDQFRDMPYQPFSKGDRLGKISDWTMVQDK------------ 296
F P + + WGP E D+PY PFSKGDRLGKI+DW++ Q K
Sbjct: 5 FKLPELAPVKSAWGPPETEQIGGDIPYAPFSKGDRLGKIADWSVDQPKDGREQRGRQGAF 64
Query: 297 --KYQNKYASQ-FGAGSSYAYFHDEDESTFHLVDTTRVQK 407
+++++Y + +GA S + Y H EDES+F ++D V +
Sbjct: 65 AGRFRDQYQTYGYGASSIFGYQHSEDESSFSVIDRGSVNR 104
>UniRef50_P30642 Cluster: Putative eukaryotic translation initiation
factor 3 subunit 7; n=2; Caenorhabditis|Rep: Putative
eukaryotic translation initiation factor 3 subunit 7 -
Caenorhabditis elegans
Length = 570
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Frame = +3
Query: 168 IQDNPTGWGPYEMPDQFRD-MPYQPFSKGDRLGKISDWTMVQ------DKKYQNK-YASQ 323
+ DN GWGP + +P+Q F+K DR+G+++DW V +++Y + Y S
Sbjct: 11 LADNTVGWGPLASSSSADEPVPFQQFNKADRIGRVADWIGVDRFYRRGNERYNERVYGSA 70
Query: 324 FGAGSSYAYFHDEDESTFHLVDTTR 398
AGS + Y H DE F LVDT++
Sbjct: 71 ANAGSQFDYIHGMDEHNFQLVDTSK 95
Score = 37.9 bits (84), Expect = 0.21
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +1
Query: 511 ERKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSLPGI 651
+R G R+G G K R SV VRP WV +E+M+ +KL+LP I
Sbjct: 160 QRGQGGRFG--GDRPKERLPSVQVRPEWVVLEEMNLSAFSKLALPNI 204
>UniRef50_Q5KMK1 Cluster: Eukaryotic translation initiation factor 3
subunit 7, putative; n=1; Filobasidiella neoformans|Rep:
Eukaryotic translation initiation factor 3 subunit 7,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 547
Score = 62.9 bits (146), Expect = 6e-09
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 15/95 (15%)
Frame = +3
Query: 153 FISPIIQDNPTG-WGPYE--MPDQFRDMPYQPFSKGDRLGKISDW----------TMVQD 293
F+ P I DN G WGP +P QF+D+PY PFSK D++ +I+DW T
Sbjct: 4 FVLPPIHDNSDGSWGPSTSTLPAQFKDIPYAPFSKSDKITRIADWHDPQAEAAAGTRTAR 63
Query: 294 KKYQNKYASQFGA--GSSYAYFHDEDESTFHLVDT 392
+ +GA G+ + + HDEDE +F LVD+
Sbjct: 64 TVQSGGRRTAYGAAEGTVFGFVHDEDEKSFSLVDS 98
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 469 ARTPGGMTTLNKPRERKLGKR--WGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSL 642
AR GG R + G R +G P + RD+SVT+ P W +E++DF RL+KLSL
Sbjct: 124 ARGRGGQRGGFSTRGGRGGARGGYGDWNKPQRTRDSSVTIGPEWEVLEEIDFNRLSKLSL 183
>UniRef50_Q6C1N1 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 532
Score = 54.0 bits (124), Expect = 3e-06
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 17/100 (17%)
Frame = +3
Query: 162 PIIQDNPTGWGPYE-MPD--QFRDMPYQPFSKGDRLGKISDWTMVQDKKYQNKYASQFG- 329
P + D WGP +P+ +F D+PY PFSKGD+LGK++DW + K +++ +QFG
Sbjct: 6 PALLDANAPWGPPSTVPEDLKFDDVPYAPFSKGDKLGKVADWA-AETKDGKDQKRTQFGK 64
Query: 330 ---------AGSSYAYFHDEDE---STFHLVDTTR-VQKP 410
SS ++F +ED S+F +VD + KP
Sbjct: 65 NFRDPYHAYGASSASFFTNEDAEELSSFSVVDNAKNANKP 104
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 472 RTPGGMTTLNKPRERKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLS 639
R P G PR K W P +IR+ASV + W I+++ + + KLS
Sbjct: 141 RGPVGGQRGPNPRFGKSKFGWRDFDKPQRIRNASVDITDDWTEIQEITYSEMQKLS 196
>UniRef50_Q1E4Z3 Cluster: Eukaryotic translation initiation factor 3
subunit 7 homolog; n=15; Dikarya|Rep: Eukaryotic
translation initiation factor 3 subunit 7 homolog -
Coccidioides immitis
Length = 598
Score = 52.8 bits (121), Expect = 7e-06
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Frame = +3
Query: 189 WGPYEMPDQFRD-MPYQPFSKGDRLGKISDW-TMVQDKK------YQNKYASQ--FGAGS 338
WGP D +PY PFSKGD+LG+++DW +D + Y Y Q +GAG+
Sbjct: 20 WGPPVPTGNHLDGVPYAPFSKGDKLGRMADWGADSKDSRERGRQAYNRNYRDQQVYGAGT 79
Query: 339 S--YAYFHDEDESTFHLVDTTR 398
S +A EDES+F +VD TR
Sbjct: 80 SSLFAVQVAEDESSFSVVDNTR 101
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 508 RERKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSL 642
R R+ G W P + RD+SV +RP W +E++DF RL+KL+L
Sbjct: 160 RGRRFG--WKDYDKPQRNRDSSVAIRPEWSMLEEIDFSRLSKLNL 202
>UniRef50_A6SJW6 Cluster: Translation initiation factor eIF3; n=2;
Sclerotiniaceae|Rep: Translation initiation factor eIF3
- Botryotinia fuckeliana B05.10
Length = 600
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1
Query: 514 RKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSL 642
RK G W P + RDASV ++P W +E++DF RLAKL+L
Sbjct: 186 RKFG--WKDYDKPQRNRDASVNIKPDWKMLEEIDFNRLAKLNL 226
Score = 41.9 bits (94), Expect = 0.013
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Frame = +3
Query: 156 ISPIIQDNPT--GWGPYEMPDQ-FRDMPYQPFSKGDRLGKISDWT 281
+S II P+ WGP + +PY P+SKGD+LG+++DWT
Sbjct: 6 LSDIISALPSEDSWGPSTTSETTLNGVPYAPYSKGDKLGRMADWT 50
>UniRef50_Q8CJ77 Cluster: Ligand-independent activating molecule for
estrogen receptor; n=2; Rattus norvegicus|Rep:
Ligand-independent activating molecule for estrogen
receptor - Rattus norvegicus (Rat)
Length = 242
Score = 36.7 bits (81), Expect = 0.49
Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 7/127 (5%)
Frame = -3
Query: 615 VHIFNRDPCWPYSYRCIT-NLHRCTTLTPPLTKLAFTWLVQCCHTTRSTCXXWHHDHAVL 439
+H C + ++C+ N HRC TPP V HTT ++ HH H +L
Sbjct: 21 LHTTTTSVCSSHHHQCLLFNHHRCLLFTPPPP-------VSALHTTTTSVCSSHHHHCLL 73
Query: 438 ---EPAHADMTDTAFALE*C--PPGERC-FHLHHGSMHKTNQPQTVMHICSGTSCLAPLS 277
P A T T C C H HH + T P + +H + T C S
Sbjct: 74 FTPPPLSALHTTTTTTTSVCFHTITSVCSSHHHHQCLLFTPPPLSALHTTT-TVC---SS 129
Query: 276 NHLSCLI 256
+H CL+
Sbjct: 130 HHHHCLL 136
Score = 35.1 bits (77), Expect = 1.5
Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 5/110 (4%)
Frame = -3
Query: 570 CITNLHRCTTLTPP----LTKLAFTWLVQCCHTTRSTCXXWHHDHAVL-EPAHADMTDTA 406
C ++ H C TPP L T C HT S C HH +L P T
Sbjct: 64 CSSHHHHCLLFTPPPLSALHTTTTTTTSVCFHTITSVCSSHHHHQCLLFTPPPLSALHTT 123
Query: 405 FALE*CPPGERCFHLHHGSMHKTNQPQTVMHICSGTSCLAPLSNHLSCLI 256
+ C HH + T P + +H + + C S+H CL+
Sbjct: 124 TTV--------CSSHHHHCLLFTPPPLSALHTTTTSVC---SSHHHHCLL 162
Score = 32.7 bits (71), Expect = 7.9
Identities = 28/105 (26%), Positives = 37/105 (35%)
Frame = -3
Query: 570 CITNLHRCTTLTPPLTKLAFTWLVQCCHTTRSTCXXWHHDHAVLEPAHADMTDTAFALE* 391
C ++ H C TPP V HTT S C HH + P T
Sbjct: 153 CSSHHHHCLLFTPPPP-------VSALHTTTSVCSSHHHQCLLFTPPPLSALHTT-TTSV 204
Query: 390 CPPGERCFHLHHGSMHKTNQPQTVMHICSGTSCLAPLSNHLSCLI 256
C H HH + T P + +H T+ S+H CL+
Sbjct: 205 CSS-----HHHHQCLLFTPPPVSALH----TTTSVCSSHHHQCLL 240
>UniRef50_Q2RB72 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 325
Score = 35.5 bits (78), Expect = 1.1
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 385 WTLLECKSRISHISVGGLEDSVVVVPXXA-RTPGGMTTLNKPRERKLGKRWGQRGAPMKI 561
W+ + R + SVGG+ +V+ A RTP L K R GKR RG+ +I
Sbjct: 228 WSSAQRARRFATGSVGGVIKRMVITALPAQRTPNNFDKLQKVLNRGKGKRGRPRGSGKRI 287
Query: 562 RDASVTVRPTWVTIEDMDF 618
S VR E+MD+
Sbjct: 288 AGVSANVRRR--LEEEMDY 304
>UniRef50_Q98FQ0 Cluster: Spermidine/putrescine ABC transporter,
periplasmic spermidine/putrescine-binding protein; n=2;
Mesorhizobium loti|Rep: Spermidine/putrescine ABC
transporter, periplasmic spermidine/putrescine-binding
protein - Rhizobium loti (Mesorhizobium loti)
Length = 360
Score = 33.9 bits (74), Expect = 3.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 267 ISDWTMVQDKKYQNKYASQFGAGSSYAYFHDEDES 371
+ DW+ +D + KY + G ++A+F DEDE+
Sbjct: 35 VFDWSGYEDPSFHPKYVEKNGDSPTFAFFGDEDEA 69
>UniRef50_Q8DGT9 Cluster:
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine o-
acyltransferase; n=3; Synechococcus elongatus|Rep:
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine o-
acyltransferase - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 279
Score = 33.5 bits (73), Expect = 4.5
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Frame = -3
Query: 585 PYSYRCIT-NLHRCTTLTPPLTKLAFTWLVQCCHTTRSTCXXWHHDHAVLEPAHADMTDT 409
P+ Y T + R T L P +T L +T L + C H AV+ D+
Sbjct: 35 PFCYVAATVEIGRGTQLAPHVTLLGYTRLGENCKV---------HSGAVIGDLPQDVAYQ 85
Query: 408 AFALE*CPPGERCFHLHHGSMHKTNQPQTVMHICSGTSCLAPLSNHL 268
+ G+RC ++H+ QP+TV H+ G CL +HL
Sbjct: 86 G-GISYVHIGDRCTLREGVTIHRGTQPETVTHV--GHDCLLMAHSHL 129
>UniRef50_A4XKR6 Cluster: Peptidase M56, BlaR1 precursor; n=3;
Clostridia|Rep: Peptidase M56, BlaR1 precursor -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494
/ DSM 8903)
Length = 517
Score = 33.5 bits (73), Expect = 4.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 58 WYLPSC*WFKIVTYHSELRCRNTYCR 135
W+L WFK++ S +C N YCR
Sbjct: 137 WFLIRYIWFKVIVIRSSRKCSNEYCR 162
>UniRef50_A0KMU6 Cluster: Oligopeptide transport ATP-binding protein
AppF; n=3; Aeromonas|Rep: Oligopeptide transport
ATP-binding protein AppF - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 330
Score = 33.5 bits (73), Expect = 4.5
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -3
Query: 630 GKTWEVHIFNRDPCW-PYSYRCITNLHRCTTLTPPLTKLAFTWLVQC 493
G+ E+ ++ + C P++ RC + RC PP++KLA V+C
Sbjct: 280 GRKGEIPLWTPESCGCPFAGRCNQAMPRCKETLPPVSKLADNHFVRC 326
>UniRef50_A6L194 Cluster: Putative outer membrane protein, probably
involved in nutrient binding; n=1; Bacteroides vulgatus
ATCC 8482|Rep: Putative outer membrane protein, probably
involved in nutrient binding - Bacteroides vulgatus
(strain ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 646
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 264 KISDWTMVQDKKYQNKYASQFGAGSSYAYFHDEDESTFHLVDTTRVQKPYQSY 422
K+ +W ++D KY N + +G SY+ +D E DT R + Y
Sbjct: 395 KVGNWVHMEDLKYNNPNSVYYGKHLSYSCINDNGEEQILCNDTVRTWFDWPHY 447
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,891,142
Number of Sequences: 1657284
Number of extensions: 15560924
Number of successful extensions: 34895
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 33767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34865
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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