Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_J23
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12017-3|CAA78049.1| 570|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 32 0.41
U42841-11|AAP31429.1| 394|Caenorhabditis elegans Gex interactin... 31 0.54
U42841-10|AAM97954.1| 380|Caenorhabditis elegans Gex interactin... 31 0.54
U42841-9|AAM97955.1| 375|Caenorhabditis elegans Gex interacting... 31 0.54
U42841-8|AAM97953.1| 476|Caenorhabditis elegans Gex interacting... 31 0.54
U42841-7|AAM97957.1| 447|Caenorhabditis elegans Gex interacting... 31 0.54
U42841-6|AAM97956.1| 404|Caenorhabditis elegans Gex interacting... 31 0.54
U42841-5|AAM97959.1| 657|Caenorhabditis elegans Gex interacting... 31 0.54
U42841-4|AAK77640.1| 706|Caenorhabditis elegans Gex interacting... 31 0.54
U42841-3|AAK77638.1| 663|Caenorhabditis elegans Gex interacting... 31 0.54
U42841-2|AAK77639.1| 603|Caenorhabditis elegans Gex interacting... 31 0.54
U42841-1|AAM97958.1| 716|Caenorhabditis elegans Gex interacting... 31 0.54
Z82051-9|CAB04820.1| 350|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z82051-7|CAB04819.1| 364|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 29 2.2
U41271-3|AAP31439.1| 577|Caenorhabditis elegans Hypothetical pr... 29 2.2
U41271-2|AAA82444.3| 713|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z97190-2|CAM06586.1| 650|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z66564-7|CAA91472.2| 650|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 28 6.7
>Z12017-3|CAA78049.1| 570|Caenorhabditis elegans Hypothetical
protein R08D7.3 protein.
Length = 570
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Frame = +3
Query: 168 IQDNPTGWGPYEMPDQFRD-MPYQPFSKGDRLGKISDWTMVQ------DKKYQNK-YASQ 323
+ DN GWGP + +P+Q F+K DR+G+++DW V +++Y + Y S
Sbjct: 11 LADNTVGWGPLASSSSADEPVPFQQFNKADRIGRVADWIGVDRFYRRGNERYNERVYGSA 70
Query: 324 FGAGSSYAYFHDEDESTFHLVDTTR 398
AGS + Y H DE F LVDT++
Sbjct: 71 ANAGSQFDYIHGMDEHNFQLVDTSK 95
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +1
Query: 511 ERKLGKRWGQRGAPMKIRDASVTVRPTWVTIEDMDFPRLAKLSLPGI 651
+R G R+G G K R SV VRP WV +E+M+ +KL+LP I
Sbjct: 160 QRGQGGRFG--GDRPKERLPSVQVRPEWVVLEEMNLSAFSKLALPNI 204
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 31.9 bits (69), Expect = 0.41
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = -3
Query: 390 CPPGERCFHLHHGSMHKTN---QPQTVMHIC-SGTSCLAPLSNHLSCLIDRLC*MADRAC 223
CP G C K N QP+ V++ C +G ++ + N SC D C + C
Sbjct: 657 CPQGSVCVMSSIQCYQKGNCVPQPRCVLNFCPAGEPYISSIGNAESCTKDEECPTSTHWC 716
Query: 222 P*IGLAS 202
+GLAS
Sbjct: 717 HKLGLAS 723
>U42841-11|AAP31429.1| 394|Caenorhabditis elegans Gex interacting
protein protein16, isoform l protein.
Length = 394
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 478 PGGMTTLNKPRERKLGKRWGQRGAPMKIRDAS 573
PGG T NK R G+R G+ G P+ +A+
Sbjct: 345 PGGYETFNKERHANSGRRSGRDGKPVDFNEAT 376
>U42841-10|AAM97954.1| 380|Caenorhabditis elegans Gex interacting
protein protein16, isoform f protein.
Length = 380
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 478 PGGMTTLNKPRERKLGKRWGQRGAPMKIRDAS 573
PGG T NK R G+R G+ G P+ +A+
Sbjct: 331 PGGYETFNKERHANSGRRSGRDGKPVDFNEAT 362
>U42841-9|AAM97955.1| 375|Caenorhabditis elegans Gex interacting
protein protein16, isoform g protein.
Length = 375
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 478 PGGMTTLNKPRERKLGKRWGQRGAPMKIRDAS 573
PGG T NK R G+R G+ G P+ +A+
Sbjct: 326 PGGYETFNKERHANSGRRSGRDGKPVDFNEAT 357
>U42841-8|AAM97953.1| 476|Caenorhabditis elegans Gex interacting
protein protein16, isoform e protein.
Length = 476
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 478 PGGMTTLNKPRERKLGKRWGQRGAPMKIRDAS 573
PGG T NK R G+R G+ G P+ +A+
Sbjct: 427 PGGYETFNKERHANSGRRSGRDGKPVDFNEAT 458
>U42841-7|AAM97957.1| 447|Caenorhabditis elegans Gex interacting
protein protein16, isoform i protein.
Length = 447
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 478 PGGMTTLNKPRERKLGKRWGQRGAPMKIRDAS 573
PGG T NK R G+R G+ G P+ +A+
Sbjct: 398 PGGYETFNKERHANSGRRSGRDGKPVDFNEAT 429
>U42841-6|AAM97956.1| 404|Caenorhabditis elegans Gex interacting
protein protein16, isoform h protein.
Length = 404
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 478 PGGMTTLNKPRERKLGKRWGQRGAPMKIRDAS 573
PGG T NK R G+R G+ G P+ +A+
Sbjct: 355 PGGYETFNKERHANSGRRSGRDGKPVDFNEAT 386
>U42841-5|AAM97959.1| 657|Caenorhabditis elegans Gex interacting
protein protein16, isoform k protein.
Length = 657
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 478 PGGMTTLNKPRERKLGKRWGQRGAPMKIRDAS 573
PGG T NK R G+R G+ G P+ +A+
Sbjct: 608 PGGYETFNKERHANSGRRSGRDGKPVDFNEAT 639
>U42841-4|AAK77640.1| 706|Caenorhabditis elegans Gex interacting
protein protein16, isoform c protein.
Length = 706
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 478 PGGMTTLNKPRERKLGKRWGQRGAPMKIRDAS 573
PGG T NK R G+R G+ G P+ +A+
Sbjct: 657 PGGYETFNKERHANSGRRSGRDGKPVDFNEAT 688
>U42841-3|AAK77638.1| 663|Caenorhabditis elegans Gex interacting
protein protein16, isoform a protein.
Length = 663
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 478 PGGMTTLNKPRERKLGKRWGQRGAPMKIRDAS 573
PGG T NK R G+R G+ G P+ +A+
Sbjct: 614 PGGYETFNKERHANSGRRSGRDGKPVDFNEAT 645
>U42841-2|AAK77639.1| 603|Caenorhabditis elegans Gex interacting
protein protein16, isoform b protein.
Length = 603
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 478 PGGMTTLNKPRERKLGKRWGQRGAPMKIRDAS 573
PGG T NK R G+R G+ G P+ +A+
Sbjct: 554 PGGYETFNKERHANSGRRSGRDGKPVDFNEAT 585
>U42841-1|AAM97958.1| 716|Caenorhabditis elegans Gex interacting
protein protein16, isoform j protein.
Length = 716
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 478 PGGMTTLNKPRERKLGKRWGQRGAPMKIRDAS 573
PGG T NK R G+R G+ G P+ +A+
Sbjct: 667 PGGYETFNKERHANSGRRSGRDGKPVDFNEAT 698
>Z82051-9|CAB04820.1| 350|Caenorhabditis elegans Hypothetical
protein T23D5.12 protein.
Length = 350
Score = 30.7 bits (66), Expect = 0.94
Identities = 15/76 (19%), Positives = 31/76 (40%)
Frame = -1
Query: 389 VHQVKGAFIFIMEVCIRRTSPKL*CIFXXXXXXLHHCPITYLA*SIAFAEWLIGHVPKLV 210
+H F+F E + S ++ I ++ I +++ + W + PKL+
Sbjct: 68 IHSYNSGFVFFTEPHLSLVSNEIMKIGLVFFCGIYGSTICFISVQFLYRYWALFDAPKLI 127
Query: 209 WHLVRSPAGWIILYYG 162
W + W+I +G
Sbjct: 128 WFEGWMMSAWLIYSFG 143
>Z82051-7|CAB04819.1| 364|Caenorhabditis elegans Hypothetical
protein T23D5.10 protein.
Length = 364
Score = 30.7 bits (66), Expect = 0.94
Identities = 15/76 (19%), Positives = 31/76 (40%)
Frame = -1
Query: 389 VHQVKGAFIFIMEVCIRRTSPKL*CIFXXXXXXLHHCPITYLA*SIAFAEWLIGHVPKLV 210
+H F+F E + S ++ I ++ I +++ + W + PKL+
Sbjct: 82 IHSYNSGFVFFTEPHLSLVSNEIMKIGLVFFCGIYGSTICFISVQFLYRYWALFDAPKLI 141
Query: 209 WHLVRSPAGWIILYYG 162
W + W+I +G
Sbjct: 142 WFEGWMMSAWLIYSFG 157
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +3
Query: 108 TTMSEHVLPAEGPMRFISPIIQDNPTGWGPYEMPDQFRDMPYQP 239
TT S+ V+ P+ + P + P +PD+ D P +P
Sbjct: 534 TTTSDPVVQTNPPVVIVDPATSEEPLSTASTALPDETTDAPEEP 577
>U41271-3|AAP31439.1| 577|Caenorhabditis elegans Hypothetical
protein C46H3.2b protein.
Length = 577
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 381 GERCFHLHHGSMHKTNQPQTVMHICSGTSCLAP--LSNHLSCL 259
G FH+ +GS T P T M+ S +SCL P + NH + +
Sbjct: 77 GSDSFHVFNGSRTSTPNPPTAMY--SSSSCLYPVKVENHYASI 117
>U41271-2|AAA82444.3| 713|Caenorhabditis elegans Hypothetical
protein C46H3.2a protein.
Length = 713
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 381 GERCFHLHHGSMHKTNQPQTVMHICSGTSCLAP--LSNHLSCL 259
G FH+ +GS T P T M+ S +SCL P + NH + +
Sbjct: 213 GSDSFHVFNGSRTSTPNPPTAMY--SSSSCLYPVKVENHYASI 253
>Z97190-2|CAM06586.1| 650|Caenorhabditis elegans Hypothetical
protein F52D10.6 protein.
Length = 650
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = -3
Query: 507 WLVQCCHTTRSTCXXWHHDHAVLEP-AHADMTDTAFAL----E*CPPGERCFHLHHGS 349
W+V CCHT ++ +H EP AH + D L + E CF L +GS
Sbjct: 558 WVVMCCHT-----LYFYRNHNEREPLAHLSLMDYGVGLPTVADKIDNHENCFKLFYGS 610
>Z66564-7|CAA91472.2| 650|Caenorhabditis elegans Hypothetical
protein F52D10.6 protein.
Length = 650
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Frame = -3
Query: 507 WLVQCCHTTRSTCXXWHHDHAVLEP-AHADMTDTAFAL----E*CPPGERCFHLHHGS 349
W+V CCHT ++ +H EP AH + D L + E CF L +GS
Sbjct: 558 WVVMCCHT-----LYFYRNHNEREPLAHLSLMDYGVGLPTVADKIDNHENCFKLFYGS 610
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 387 PPGERCFHLHHGSMHKTNQPQTVMH 313
PP + H HH S H+ +Q Q +H
Sbjct: 423 PPHQHPIHHHHQSQHQLHQHQQYLH 447
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 387 PPGERCFHLHHGSMHKTNQPQTVMH 313
PP + H HH S H+ +Q Q +H
Sbjct: 390 PPHQHPIHHHHQSQHQLHQHQQYLH 414
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,293,911
Number of Sequences: 27780
Number of extensions: 367370
Number of successful extensions: 821
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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