Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_J16
         (624 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...   125   2e-29
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...   119   1e-27
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    31   0.67 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    31   0.88 
Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical pr...    28   4.7  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score =  125 bits (302), Expect = 2e-29
 Identities = 52/83 (62%), Positives = 65/83 (78%)
 Frame = -1

Query: 381 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKXTG 202
           MTKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGYP AK R+Y+W  K+ RR+ TG
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60

Query: 201 TGRMXHLKIVRRRFRNGFKERET 133
           TGR  HL+ V  RFRNGF+E  T
Sbjct: 61  TGRTRHLRDVNARFRNGFREGTT 83


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score =  119 bits (287), Expect = 1e-27
 Identities = 49/79 (62%), Positives = 62/79 (78%)
 Frame = -1

Query: 381 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKXTG 202
           MTKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGY  AK R+Y+W  K+ RR+ TG
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60

Query: 201 TGRMXHLKIVRRRFRNGFK 145
           TGR  HL+ V  RFRNGF+
Sbjct: 61  TGRTRHLRDVNARFRNGFR 79


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 363 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 256
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 93  TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 363 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 256
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 165 TYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198


>Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical
           protein C17H1.9 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -2

Query: 350 AEIRPIRYAEDVVDRH---ITFKNQNAPNVDILQQNYDP 243
           A+++ I+Y  D +++H   + F+NQ   +   L+ N DP
Sbjct: 230 ADLKKIKYTSDEIEKHKSKLEFRNQQLESSRTLEINADP 268


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,358,992
Number of Sequences: 27780
Number of extensions: 146356
Number of successful extensions: 333
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 333
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)