Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_J15
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          27   0.51 
AY146722-1|AAO12082.1|  107|Anopheles gambiae odorant-binding pr...    25   2.7  
AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding pr...    25   2.7  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   2.7  
AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding pr...    24   3.6  
AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding pr...    24   3.6  
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    23   8.4  

>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +3

Query: 279 RAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFA 422
           ++K ++KRKETLG  +   +K     D    + NN+  +  KM + FA
Sbjct: 43  QSKKLEKRKETLGESLDKNHKKKIERDEEKLKNNNRDLSLVKMKSMFA 90


>AY146722-1|AAO12082.1|  107|Anopheles gambiae odorant-binding
           protein AgamOBP16 protein.
          Length = 107

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 477 EILTHRGXTLEQIEKFDDPRS 539
           E L   G T EQIE+F+ P+S
Sbjct: 38  ECLRETGTTDEQIEQFNSPQS 58


>AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding
           protein AgamOBP15 protein.
          Length = 147

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 477 EILTHRGXTLEQIEKFDDPRS 539
           E L   G T EQIE+F+ P+S
Sbjct: 38  ECLRETGTTDEQIEQFNSPQS 58


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 306 ETLGTEMK-LMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAER 431
           +TL  E K L  + +T     +GE   QL+ E K  A  AAER
Sbjct: 275 QTLEQEAKELQERIDTEGGGVLGELEQQLAVESKKEATVAAER 317


>AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding
           protein AgamOBP50 protein.
          Length = 166

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/42 (21%), Positives = 18/42 (42%)
 Frame = -3

Query: 435 SLFQQRISQSFYLQPTTGCSSHQYDDQ*MCSSYSSASFLCPM 310
           S+F  +      L+    C + ++D   +C    S   +CP+
Sbjct: 125 SMFAVKFHACVSLETMRNCPAERWDSSVLCEKVRSGVTVCPL 166


>AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding
           protein OBPjj6b protein.
          Length = 315

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/42 (21%), Positives = 18/42 (42%)
 Frame = -3

Query: 435 SLFQQRISQSFYLQPTTGCSSHQYDDQ*MCSSYSSASFLCPM 310
           S+F  +      L+    C + ++D   +C    S   +CP+
Sbjct: 274 SMFAVKFHACVSLETMRNCPAERWDSSVLCEKVRSGVTVCPL 315


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 297 KRKETLGTEMKLMNKTNTFIDRRIGEKNN 383
           KRK+ L       N T + I+R+  EK+N
Sbjct: 4   KRKQVLNRSSSKSNFTKSAINRKRPEKSN 32


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,177
Number of Sequences: 2352
Number of extensions: 9569
Number of successful extensions: 30
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)