Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_J15
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC053635-1|AAH53635.1| 857|Homo sapiens nucleolar protein 14 pr... 143 4e-34
BC026035-1|AAH26035.1| 806|Homo sapiens NOL14 protein protein. 143 4e-34
AF040965-1|AAB97011.1| 873|Homo sapiens unknown protein IT12 pr... 143 4e-34
U42408-1|AAB58817.1| 517|Homo sapiens ladinin protein. 30 6.2
BC071890-1|AAH71890.1| 517|Homo sapiens ladinin 1 protein. 30 6.2
BC009742-1|AAH09742.1| 517|Homo sapiens ladinin 1 protein. 30 6.2
AY358204-1|AAQ88571.1| 159|Homo sapiens SQAW5801 protein. 30 6.2
BC064507-1|AAH64507.1| 159|Homo sapiens transmembrane protein 9... 30 8.2
BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein. 30 8.2
AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,... 30 8.2
AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,... 30 8.2
AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,... 30 8.2
AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein pr... 30 8.2
AK090637-1|BAC03495.1| 159|Homo sapiens protein ( Homo sapiens ... 30 8.2
AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein. 30 8.2
>BC053635-1|AAH53635.1| 857|Homo sapiens nucleolar protein 14
protein.
Length = 857
Score = 143 bits (347), Expect = 4e-34
Identities = 78/171 (45%), Positives = 103/171 (60%)
Frame = +3
Query: 105 MAKVKNKRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRA 284
MAK K A + + K NPFEV VNR+K ++LG+K++HD GLPGVSRA
Sbjct: 1 MAKAKKVGARRKASGAPAGARGGPAKANSNPFEVKVNRQKFQILGRKTRHDVGLPGVSRA 60
Query: 285 KAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYN 464
+A++KR +TL E K +K+N F D+R GE N+ +S E+KM+ RFA E+ + H KKSIYN
Sbjct: 61 RALRKRTQTLLKEYKERDKSNVFRDKRFGEYNSNMSPEEKMMKRFALEQQRHHEKKSIYN 120
Query: 465 LADDEILTHRGXTLEQIEKFDDPRSXXXXXXGXAYGGLXYDFVAEGHFGGG 617
L +DE LTH G +L IEK +D G L + A HFGGG
Sbjct: 121 LNEDEELTHYGQSLADIEKHND--IVDSDSDAEDRGTLSAELTA-AHFGGG 168
>BC026035-1|AAH26035.1| 806|Homo sapiens NOL14 protein protein.
Length = 806
Score = 143 bits (347), Expect = 4e-34
Identities = 78/171 (45%), Positives = 103/171 (60%)
Frame = +3
Query: 105 MAKVKNKRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRA 284
MAK K A + + K NPFEV VNR+K ++LG+K++HD GLPGVSRA
Sbjct: 1 MAKAKKVGARRKASGAPAGARGGPAKANSNPFEVKVNRQKFQILGRKTRHDVGLPGVSRA 60
Query: 285 KAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYN 464
+A++KR +TL E K +K+N F D+R GE N+ +S E+KM+ RFA E+ + H KKSIYN
Sbjct: 61 RALRKRTQTLLKEYKERDKSNVFRDKRFGEYNSNMSPEEKMMKRFALEQQRHHEKKSIYN 120
Query: 465 LADDEILTHRGXTLEQIEKFDDPRSXXXXXXGXAYGGLXYDFVAEGHFGGG 617
L +DE LTH G +L IEK +D G L + A HFGGG
Sbjct: 121 LNEDEELTHYGQSLADIEKHND--IVDSDSDAEDRGTLSAELTA-AHFGGG 168
>AF040965-1|AAB97011.1| 873|Homo sapiens unknown protein IT12
protein.
Length = 873
Score = 143 bits (347), Expect = 4e-34
Identities = 78/171 (45%), Positives = 103/171 (60%)
Frame = +3
Query: 105 MAKVKNKRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRA 284
MAK K A + + K NPFEV VNR+K ++LG+K++HD GLPGVSRA
Sbjct: 17 MAKAKKVGARRKASGAPAGARGGPAKANSNPFEVKVNRQKFQILGRKTRHDVGLPGVSRA 76
Query: 285 KAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYN 464
+A++KR +TL E K +K+N F D+R GE N+ +S E+KM+ RFA E+ + H KKSIYN
Sbjct: 77 RALRKRTQTLLKEYKERDKSNVFRDKRFGEYNSNMSPEEKMMKRFALEQQRHHEKKSIYN 136
Query: 465 LADDEILTHRGXTLEQIEKFDDPRSXXXXXXGXAYGGLXYDFVAEGHFGGG 617
L +DE LTH G +L IEK +D G L + A HFGGG
Sbjct: 137 LNEDEELTHYGQSLADIEKHND--IVDSDSDAEDRGTLSAELTA-AHFGGG 184
>U42408-1|AAB58817.1| 517|Homo sapiens ladinin protein.
Length = 517
Score = 30.3 bits (65), Expect = 6.2
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = +3
Query: 225 IKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDK 404
+ V K+ +K L G SRA+ RKE L + ++ N +I R +++ ++
Sbjct: 436 VGVASKRHLFEKELAGQSRAEPASSRKENLRLSGVVTSRLNLWISRT--QESGDQDPQEA 493
Query: 405 MIARFAAERVKQHNKKSIYNLADDEI 482
A A ER Q +KS +L D E+
Sbjct: 494 QKASSATERT-QWGQKSDSSL-DAEV 517
>BC071890-1|AAH71890.1| 517|Homo sapiens ladinin 1 protein.
Length = 517
Score = 30.3 bits (65), Expect = 6.2
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = +3
Query: 225 IKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDK 404
+ V K+ +K L G SRA+ RKE L + ++ N +I R +++ ++
Sbjct: 436 VGVASKRHLFEKELAGQSRAEPASSRKENLRLSGVVTSRLNLWISRT--QESGDQDPQEA 493
Query: 405 MIARFAAERVKQHNKKSIYNLADDEI 482
A A ER Q +KS +L D E+
Sbjct: 494 QKASSATERT-QWGQKSDSSL-DAEV 517
>BC009742-1|AAH09742.1| 517|Homo sapiens ladinin 1 protein.
Length = 517
Score = 30.3 bits (65), Expect = 6.2
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = +3
Query: 225 IKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDK 404
+ V K+ +K L G SRA+ RKE L + ++ N +I R +++ ++
Sbjct: 436 VGVASKRHLFEKELAGQSRAEPASSRKENLRLSGVVTSRLNLWISRT--QESGDQDPQEA 493
Query: 405 MIARFAAERVKQHNKKSIYNLADDEI 482
A A ER Q +KS +L D E+
Sbjct: 494 QKASSATERT-QWGQKSDSSL-DAEV 517
>AY358204-1|AAQ88571.1| 159|Homo sapiens SQAW5801 protein.
Length = 159
Score = 30.3 bits (65), Expect = 6.2
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -2
Query: 391 DNWLFFSPIRRSINVFVLFISFISVPNVSFLFCTALARDTPGKPLSC 251
+N LF P+R + +F++ +S + ++ FC P P+ C
Sbjct: 48 ENELFPGPVRIFVIIFLVILSVFCICGLAKCFCRNCREPEPDSPVDC 94
>BC064507-1|AAH64507.1| 159|Homo sapiens transmembrane protein 92
protein.
Length = 159
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -2
Query: 391 DNWLFFSPIRRSINVFVLFISFISVPNVSFLFCTALARDTPGKPLSC 251
+N LF P+R + +F++ +S + ++ FC P P+ C
Sbjct: 48 ENELFPGPVRIFVIIFLVILSVFCICGLAKCFCRNCREPEPDTPVDC 94
>BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein.
Length = 771
Score = 29.9 bits (64), Expect = 8.2
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +3
Query: 111 KVKNKRNSGLADKVHSKRK-AEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAK 287
K KNK S DKV K K E ++ P++ + E+ K K + + + K
Sbjct: 603 KDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLKEEEADPYKFKIKEFEDVDPKVKLK 662
Query: 288 --AVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIA 413
V+K KE + K K D+R EK EDKM A
Sbjct: 663 DGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKA 706
>AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 29.9 bits (64), Expect = 8.2
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +3
Query: 111 KVKNKRNSGLADKVHSKRK-AEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAK 287
K KNK S DKV K K E ++ P++ + E+ K K + + + K
Sbjct: 546 KDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLKEEEADPYKFKIKEFEDVDPKVKLK 605
Query: 288 --AVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIA 413
V+K KE + K K D+R EK EDKM A
Sbjct: 606 DGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKA 649
>AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 29.9 bits (64), Expect = 8.2
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +3
Query: 111 KVKNKRNSGLADKVHSKRK-AEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAK 287
K KNK S DKV K K E ++ P++ + E+ K K + + + K
Sbjct: 546 KDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLKEEEADPYKFKIKEFEDVDPKVKLK 605
Query: 288 --AVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIA 413
V+K KE + K K D+R EK EDKM A
Sbjct: 606 DGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKA 649
>AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 29.9 bits (64), Expect = 8.2
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +3
Query: 111 KVKNKRNSGLADKVHSKRK-AEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAK 287
K KNK S DKV K K E ++ P++ + E+ K K + + + K
Sbjct: 546 KDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLKEEEADPYKFKIKEFEDVDPKVKLK 605
Query: 288 --AVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIA 413
V+K KE + K K D+R EK EDKM A
Sbjct: 606 DGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKA 649
>AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein
protein.
Length = 681
Score = 29.9 bits (64), Expect = 8.2
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +3
Query: 111 KVKNKRNSGLADKVHSKRK-AEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAK 287
K KNK S DKV K K E ++ P++ + E+ K K + + + K
Sbjct: 524 KDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLKEEEADPYKFKIKEFEDVDPKVKLK 583
Query: 288 --AVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIA 413
V+K KE + K K D+R EK EDKM A
Sbjct: 584 DGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKA 627
>AK090637-1|BAC03495.1| 159|Homo sapiens protein ( Homo sapiens
cDNA FLJ33318 fis, clone BNGH42007594. ).
Length = 159
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -2
Query: 391 DNWLFFSPIRRSINVFVLFISFISVPNVSFLFCTALARDTPGKPLSC 251
+N LF P+R + +F++ +S + ++ FC P P+ C
Sbjct: 48 ENELFPGPVRIFVIIFLVILSVFCICGLAKCFCRNCREPEPDTPVDC 94
>AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein.
Length = 727
Score = 29.9 bits (64), Expect = 8.2
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = +3
Query: 111 KVKNKRNSGLADKVHSKRK-AEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAK 287
K KNK S DKV K K E ++ P++ + E+ K K + + + K
Sbjct: 546 KDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLKEEEADPYKFKIKEFEDVDPKVKLK 605
Query: 288 --AVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIA 413
V+K KE + K K D+R EK EDKM A
Sbjct: 606 DGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKA 649
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,928,322
Number of Sequences: 237096
Number of extensions: 1319890
Number of successful extensions: 2775
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2705
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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