Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_J15
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical ... 107 5e-24
Z46996-1|CAA87099.1| 472|Caenorhabditis elegans Hypothetical pr... 32 0.31
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 32 0.41
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 31 0.54
AL117199-2|CAB55041.1| 189|Caenorhabditis elegans Hypothetical ... 31 0.94
AL117199-1|CAB55038.1| 189|Caenorhabditis elegans Hypothetical ... 31 0.94
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 30 1.6
U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81114-4|CAB03288.2| 688|Caenorhabditis elegans Hypothetical pr... 29 2.2
AY652944-1|AAT73711.1| 688|Caenorhabditis elegans guanylate cyc... 29 2.2
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical ... 29 2.9
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 29 3.8
U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 29 3.8
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 29 3.8
Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical pr... 28 5.0
U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly glu... 28 5.0
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 5.0
AC024843-1|AAR12983.3| 193|Caenorhabditis elegans Hypothetical ... 28 5.0
Z77661-6|CAB01185.1| 192|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 28 6.6
AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassi... 28 6.6
AL132865-15|CAE18035.1| 126|Caenorhabditis elegans Hypothetical... 28 6.6
AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical ... 28 6.6
Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 27 8.7
Z22176-12|CAO82057.1| 546|Caenorhabditis elegans Hypothetical p... 27 8.7
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 27 8.7
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 27 8.7
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 27 8.7
>AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical
protein Y48G1A.4 protein.
Length = 813
Score = 107 bits (258), Expect = 5e-24
Identities = 59/151 (39%), Positives = 84/151 (55%), Gaps = 5/151 (3%)
Frame = +3
Query: 180 KKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFID 359
++K NPFE+ N+ K +LG+K G P SR +A ++R++TLG E NK + +D
Sbjct: 9 QRKTNPFELKFNKSKHDILGRKKGAQVGAPTASRKRAHEQREQTLGVEYDRKNKISKIVD 68
Query: 360 RRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADD-----EILTHRGXTLEQIEKF 524
+R+GEK+ + S E+K RF ERVK + + S +NL DD E+LTH+G L IEK+
Sbjct: 69 KRLGEKDGK-SEEEKGAMRFTEERVKNYKRASKFNLTDDGDEEEEVLTHKGKALSDIEKY 127
Query: 525 DDPRSXXXXXXGXAYGGLXYDFVAEGHFGGG 617
D G L + V HFGGG
Sbjct: 128 -DKSMISDSDDDEEPGNLGSNMVKVAHFGGG 157
>Z46996-1|CAA87099.1| 472|Caenorhabditis elegans Hypothetical
protein C34C12.1 protein.
Length = 472
Score = 32.3 bits (70), Expect = 0.31
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +3
Query: 123 KRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKH-DKGLPGVSRAKAVQK 299
K ++D K AEI KKI + EK+ L K K + L + ++ +++
Sbjct: 28 KLTRDVSDAKLLKEDAEIKLKKIRNKLNGEHSEKLGKLNDKYKAVQEELKTMKQSSQLKR 87
Query: 300 RKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAED 401
K L TE + + + +DR++ KN++L D
Sbjct: 88 EKGVLETENRRLETAKSELDRQLLGKNDELRMAD 121
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.41
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +3
Query: 84 SVYK*IKMAK--VKNKRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGK-KSKH 254
S+ + IK A+ VKN S D ++ RKAE KI + E++K GK K K
Sbjct: 672 SILEKIKEAREEVKNVIRSDYTDCLNKVRKAEDTLAKIEN-KYKKESEEVKKTGKNKDKV 730
Query: 255 DKGLPGVSRAK-AVQKRKETLGTEMKLMNKTNTFIDR 362
+K V +AK QK KE E++ + K +++
Sbjct: 731 EKTKEEVEKAKEEFQKVKEEFQKEVEKVKKVEKELEK 767
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 31.5 bits (68), Expect = 0.54
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 3/120 (2%)
Frame = +3
Query: 102 KMAKVKNKRNSGLADKVHSKRKAEINK---KKINPFEVHVNREKIKVLGKKSKHDKGLPG 272
K VK+ A K SK KA K KK E E+ K KKS+ K
Sbjct: 27 KAGAVKSSTAPAPAPKADSKMKAPEEKEKSKKSEKKEEPKKEEEKKEKSKKSEGKKSDKK 86
Query: 273 VSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKK 452
+ + ++ KE E K K + D + EK ++ + K + E+ K +KK
Sbjct: 87 EEKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKK 146
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/98 (24%), Positives = 41/98 (41%)
Frame = +3
Query: 159 KRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMN 338
K K++ ++KK P + +EK K K K + + + +KE E K +
Sbjct: 53 KEKSKKSEKKEEPKKEEEKKEKSKKSEGKKSDKKEEKKEEKKEEKEDKKEEKKEEKKEDD 112
Query: 339 KTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKK 452
K + D + EK +EDK + K+ +KK
Sbjct: 113 KKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKKEDKK 150
>AL117199-2|CAB55041.1| 189|Caenorhabditis elegans Hypothetical
protein Y43F11A.4 protein.
Length = 189
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -3
Query: 477 RHLPNCIYSFYCVVSLFQQRISQSFYLQPTTGCSSHQY 364
RH +Y C + +F++ +++ LQ TG S +QY
Sbjct: 46 RHALQRLYDLNCSIQVFEECLTEKVILQKYTGQSEYQY 83
>AL117199-1|CAB55038.1| 189|Caenorhabditis elegans Hypothetical
protein Y43F11A.1 protein.
Length = 189
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -3
Query: 477 RHLPNCIYSFYCVVSLFQQRISQSFYLQPTTGCSSHQY 364
RH +Y C + +F++ +++ LQ TG S +QY
Sbjct: 46 RHALQRLYDLNCSIQVFEECLTEKVILQKYTGQSEYQY 83
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 117 KNKRNSGLADKVHSKRKAE-INKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAK 287
K K+ + + +K K + +NK+ + V N + + + K+ H +PG SR+K
Sbjct: 1070 KTKKKDAKSSENRAKEKQKPMNKRPTSSASVDSNDDGVHIPAKRMAHASSVPGPSRSK 1127
>U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical
protein F13H8.8 protein.
Length = 520
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 150 VHSKRKAEINKKKINPFEVHVN-REKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGT 320
VH+ R++E+ KKK++ FE+ ++ E+ K+ + K L S V RKE T
Sbjct: 417 VHAYRRSEVGKKKVDDFEMKISTAEEKKLSCEAPKVSFQLADKSLQLNVYNRKERPNT 474
>Z81114-4|CAB03288.2| 688|Caenorhabditis elegans Hypothetical
protein T04D3.4 protein.
Length = 688
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 114 VKNKRNS-GLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGK 242
V NK S G+ K+H ++N K NP V ++R ++ GK
Sbjct: 547 VANKMESNGIQCKIHVSETGKLNGLKANPSYVFIDRGNTEIRGK 590
>AY652944-1|AAT73711.1| 688|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 688
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 114 VKNKRNS-GLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGK 242
V NK S G+ K+H ++N K NP V ++R ++ GK
Sbjct: 547 VANKMESNGIQCKIHVSETGKLNGLKANPSYVFIDRGNTEIRGK 590
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +3
Query: 147 KVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGV-SRAKAVQKRKETLGTE 323
K H + AE NK+ FE R + +V ++H K + + + +K+ E L +
Sbjct: 559 KTHETQIAEKNKEFERNFEEERARREAEVCAMNNRHQKVVACLDEKISEAEKQCEQLNVD 618
Query: 324 MKLMNKT-NTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADDEI 482
K++ D R ++S+ + +AE + K +L DEI
Sbjct: 619 KKVLQAALANDCDHRNQMLTKEISSLQTALEMKSAEMKELRQKNQNLSLQVDEI 672
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +3
Query: 147 KVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGV-SRAKAVQKRKETLGTE 323
K H + AE NK+ FE R + +V ++H K + + + +K+ E L +
Sbjct: 627 KTHETQIAEKNKEFERNFEEERARREAEVCAMNNRHQKVVACLDEKISEAEKQCEQLNVD 686
Query: 324 MKLMNKT-NTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADDEI 482
K++ D R ++S+ + +AE + K +L DEI
Sbjct: 687 KKVLQAALANDCDHRNQMLTKEISSLQTALEMKSAEMKELRQKNQNLSLQVDEI 740
>AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical
protein Y47H9C.9 protein.
Length = 829
Score = 29.1 bits (62), Expect = 2.9
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +3
Query: 123 KRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKH-DKGLPGVSRAKAVQK 299
K ++D K AEI KKI + EK+ L K K + L + ++ K
Sbjct: 22 KLTRDVSDAKLLKEDAEIKLKKIRDKLNGEHSEKLGKLNDKYKAVQEELKTMKQSWTQLK 81
Query: 300 R-KETLGTEMKLMNKTNTFIDRRIGEKNNQLSAED 401
R K L TE + + +DR++ KN++L D
Sbjct: 82 REKGVLETENRRLETAKRELDRQLSGKNDELRMAD 116
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 144 DKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSK-HDKGLPGVSRAKAVQKRKETLG 317
DKV + R+ E++ KKI+P R + K++ K K GL S + +++ ET G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYG 158
>U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical
protein ZK328.6 protein.
Length = 394
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/64 (21%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 219 EKIKVLGKKSKHDKGLPGVSRAKAVQKRKET-LGTEMKLMNKTNTFIDRRIGEKNNQLSA 395
+ I++ + H G+P + K ++K+KET + TE ++ K + +++ +K ++
Sbjct: 287 KSIQMTASQGTHVDGVPPTKKKKVIRKKKETEVVTEEGVLPKPKKKVVKKVVKKKKPIAF 346
Query: 396 EDKM 407
K+
Sbjct: 347 IKKL 350
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 28.7 bits (61), Expect = 3.8
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = +3
Query: 156 SKRKAEINKKKINPFEVHVNREKIKVLGKKSKH--DKGLPGVSRAKAVQKRKETLGTEMK 329
++ +AE +K+ E +E ++ + K+ + ++ +RAKA++K K L + K
Sbjct: 279 AEARAEALEKEKREQEEKQKKENLERVEKERREHIERHRQAEARAKALEKEKRELEEKQK 338
Query: 330 LMNKTNTFIDRRIG-EKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADDE 479
N +RR E++ Q A K + + E ++ K+++ E
Sbjct: 339 KENLERVEKERREHIERHRQAEARAKALEKEKRELEEKQKKENLERATQKE 389
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 144 DKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSK-HDKGLPGVSRAKAVQKRKETLG 317
DKV + R+ E++ KKI+P R + K++ K K GL S + +++ ET G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYG 158
>Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical
protein C01F6.2 protein.
Length = 487
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 357 DRRIGEKNNQLSA---EDKMIARFAAERVKQHNKKSIYNLADDEI 482
D IGEK +++ +DK + E++K+ KKS + DE+
Sbjct: 179 DHCIGEKGKKINGSLEKDKKVKESGKEKIKKETKKSPQTMTLDEV 223
>U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform c
protein.
Length = 670
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/55 (21%), Positives = 29/55 (52%)
Frame = +3
Query: 123 KRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAK 287
K+++ ++ +++ +NK+ + V N + + + K+ H +PG SR+K
Sbjct: 96 KKDAKSSENRAKEKQKPMNKRPTSSASVDSNDDGVHIPAKRMAHASSVPGPSRSK 150
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +3
Query: 111 KVKNKRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKA 290
KV+ +RN + KAE K KI +V +KIK ++ + ++ AK
Sbjct: 952 KVEKERNKEKVKAEEERLKAEEEKVKIEKEKVKAEEQKIKAAEEERRKER----AEDAKK 1007
Query: 291 VQKRKETLG-TEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQ 440
V++ +E + K+ K + RR K ++ E + + E+ K+
Sbjct: 1008 VKEGQEKIAILNAKVQEKEDKSEARR---KQKEMDNEAEKLLNVEKEKEKR 1055
>AC024843-1|AAR12983.3| 193|Caenorhabditis elegans Hypothetical
protein Y61A9LA.12 protein.
Length = 193
Score = 28.3 bits (60), Expect = 5.0
Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Frame = +3
Query: 123 KRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKH-DKGLPGVSRAKAVQK 299
K ++D K AEI KKI + EK+ L K K + L + ++ K
Sbjct: 28 KLTRDVSDAKLLKEDAEIKLKKIRNKLNGEHSEKLGKLNDKYKAVQEELKTMKQSWTQLK 87
Query: 300 R-KETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADD 476
R K L TE + + + +DR++ KN++L D + R + K+ + +
Sbjct: 88 REKGVLETENRRLETAKSGLDRQLLGKNDELRMADVEVEDVKMIRDLKAGKRPPFT-TEF 146
Query: 477 EILTHRGXTLEQIEK 521
+ L R +IEK
Sbjct: 147 KNLISRSEKFRRIEK 161
>Z77661-6|CAB01185.1| 192|Caenorhabditis elegans Hypothetical
protein F40G12.7 protein.
Length = 192
Score = 27.9 bits (59), Expect = 6.6
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +3
Query: 123 KRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKH-DKGLPGVSRAKAVQK 299
K ++D K AEI KKI + EK+ L K K + L + ++ K
Sbjct: 28 KLTRDVSDAKLLKEDAEIKLKKIRNKLNGEHSEKLGKLNDKYKAVQEELKTMKQSWTQLK 87
Query: 300 R-KETLGTEMKLMNKTNTFIDRRIGEKNNQLSAED 401
R K L TE + + + +DR++ KN++L D
Sbjct: 88 REKGVLETENRRLETAKSELDRQLLGKNDELRMAD 122
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/98 (22%), Positives = 41/98 (41%)
Frame = +3
Query: 159 KRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMN 338
+ KAE++ K++ E +EK K +K K + L R++ +K +E + K
Sbjct: 172 EEKAEMDAKRVAEEEEERRKEKEKRREEKKKQKELLKEKERSERKEKERELEREKEKSRE 231
Query: 339 KTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKK 452
K + EK + E + E+ ++ KK
Sbjct: 232 KEREKEREKEREKEREKEREKQKEREKEREKEREKEKK 269
>AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassium
channel protein.
Length = 580
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 207 HVNRE-KIKVLGKKSKHDKGLPGVSRAKAVQK-RKETLGTEMKLMNKTNTFIDRRIGEKN 380
H+N +IK L ++ G PG K +K T+G+ + + + +DR++ N
Sbjct: 463 HLNMMVRIKELQRRLDQTLGKPGQYDGKGSRKGHPVTIGSRLSRLELQMSSLDRKVESSN 522
Query: 381 NQLSAEDKMIA 413
L+A +++A
Sbjct: 523 RTLNALYRLMA 533
>AL132865-15|CAE18035.1| 126|Caenorhabditis elegans Hypothetical
protein Y62E10A.18 protein.
Length = 126
Score = 27.9 bits (59), Expect = 6.6
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +3
Query: 120 NKRNSGLADKVHSK--RKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAV 293
++R+S A K++ K KAE ++K N + RE K KK + K G+
Sbjct: 4 DERSSNPAVKLNEKTMEKAEFDEKLRNHAQDTWEREN-KAAEKKREEMKN-GGIE----- 56
Query: 294 QKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLS 392
+ ++ + MKL+ K N+ I+RRI +S
Sbjct: 57 ENEEQPISPAMKLLEKENSDINRRIAIAEQTMS 89
>AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical
protein Y54G9A.3 protein.
Length = 621
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 207 HVNRE-KIKVLGKKSKHDKGLPGVSRAKAVQK-RKETLGTEMKLMNKTNTFIDRRIGEKN 380
H+N +IK L ++ G PG K +K T+G+ + + + +DR++ N
Sbjct: 504 HLNMMVRIKELQRRLDQTLGKPGQYDGKGSRKGHPVTIGSRLSRLELQMSSLDRKVESSN 563
Query: 381 NQLSAEDKMIA 413
L+A +++A
Sbjct: 564 RTLNALYRLMA 574
>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
protein ZK1098.10d protein.
Length = 1185
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 261 GLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKN 380
G+PG S+ + + TL M +M+ + +ID RIGE+N
Sbjct: 1116 GVPGASKNGEDESAEVTL-RRMLIMSGGDGYIDFRIGEEN 1154
>Z22176-12|CAO82057.1| 546|Caenorhabditis elegans Hypothetical
protein ZK1098.10c protein.
Length = 546
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 261 GLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKN 380
G+PG S+ + + TL M +M+ + +ID RIGE+N
Sbjct: 477 GVPGASKNGEDESAEVTL-RRMLIMSGGDGYIDFRIGEEN 515
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 261 GLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKN 380
G+PG S+ + + TL M +M+ + +ID RIGE+N
Sbjct: 1088 GVPGASKNGEDESAEVTL-RRMLIMSGGDGYIDFRIGEEN 1126
>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical protein
ZK1098.10a protein.
Length = 1139
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 261 GLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKN 380
G+PG S+ + + TL M +M+ + +ID RIGE+N
Sbjct: 1070 GVPGASKNGEDESAEVTL-RRMLIMSGGDGYIDFRIGEEN 1108
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 261 GLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKN 380
G+PG S+ + + TL M +M+ + +ID RIGE+N
Sbjct: 1088 GVPGASKNGEDESAEVTL-RRMLIMSGGDGYIDFRIGEEN 1126
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 138 LADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKE 308
+A + HSKR AE + K+ E REK G K D P + +A +K+ +
Sbjct: 79 MAQEHHSKRMAEADGKRKKLIEDLEKREKEFSNGGKRSADGSTPMTAAQQAKKKKTD 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,723,818
Number of Sequences: 27780
Number of extensions: 233929
Number of successful extensions: 724
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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