Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_J13
         (507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.39 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.90 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   8.4  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.0 bits (52), Expect = 0.39
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -1

Query: 495 IHVFFFLIPFSFHRRLRTTXVSIYLCLRIVVLSLST 388
           I   F L+P   H RL      +YL    VVLSL +
Sbjct: 13  ISKIFALLPVKKHHRLEKLVPCVYLTSFSVVLSLGS 48


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 85  VSIYLAQDVHSHQRFRRPEDKAGGSRRQARRDR 183
           +S ++ ++ H  +   R   ++GG RRQ R  R
Sbjct: 563 LSNHMVKNSHYKEHIMRSITESGGRRRQTREKR 595


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 93  LSCPRCPFTSK 125
           L+CP+CPF ++
Sbjct: 231 LTCPKCPFITE 241


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 165  TSSS*STSWRPGA 203
            TS S +TSW PG+
Sbjct: 1350 TSVSTTTSWNPGS 1362


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/35 (22%), Positives = 20/35 (57%)
 Frame = +1

Query: 388 RRQTQNNYP*TQVNRDXSCTQPPMETKWN*KKKNM 492
           R+Q  + +P +  ++  +   PP + + N +K+N+
Sbjct: 210 RKQLVSEHPDSPNSKKSATPSPPPQLEVNERKENL 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,618
Number of Sequences: 336
Number of extensions: 1641
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)