Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_J12
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    27   0.68 
Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease prot...    25   2.1  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   2.8  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.4  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    23   8.4  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 181 MFTKFFDTFSQFITKISVITHFRS 110
           +FT   DTFS  +T I +  HFRS
Sbjct: 307 LFTMILDTFSICVTVIVLNIHFRS 330


>Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease
           protein.
          Length = 268

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 406 PNHFSTFRRXRVYHANVNSQVFEVPFENS 320
           PN  + FR  + +H N N Q+  +P  N+
Sbjct: 122 PNDIAIFRVDKPFHLNRNIQLVSLPEPNA 150


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 460 MFSTCEQTVLTAASSFLDPN 401
           M S CE+T+    SSF DP+
Sbjct: 327 MISACEKTMQRMTSSFPDPH 346


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 209 RASMKHNLTDVYQIF*H 159
           + + KHN T+V Q+F H
Sbjct: 339 KLAQKHNFTNVLQLFLH 355


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/40 (25%), Positives = 16/40 (40%)
 Frame = +1

Query: 169 IW*TSVRLCFILALVFRPKHEANCSKSESQNPRRAYGPCE 288
           +W   + LCF    +F  +   +CS        R Y  C+
Sbjct: 3   LWTVVIVLCFFATDLFALQDGESCSHQGESGVCRPYSKCK 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,484
Number of Sequences: 2352
Number of extensions: 13764
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)