Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_J12
(653 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X94613-1|CAA64319.1| 190|Drosophila melanogaster ribosomal prot... 170 1e-42
BT022718-1|AAY55134.1| 190|Drosophila melanogaster RE74350p pro... 170 1e-42
AE014134-2010|AAF53049.1| 190|Drosophila melanogaster CG6141-PB... 170 1e-42
AE014134-2009|AAF53048.2| 190|Drosophila melanogaster CG6141-PA... 170 1e-42
BT029934-1|ABM92808.1| 1442|Drosophila melanogaster IP14638p pro... 30 2.4
AE013599-3499|AAF46925.1| 1439|Drosophila melanogaster CG3695-PA... 30 2.4
AE014297-4835|AAN14298.1| 436|Drosophila melanogaster CG31001-P... 28 9.6
>X94613-1|CAA64319.1| 190|Drosophila melanogaster ribosomal protein
L9 protein.
Length = 190
Score = 170 bits (414), Expect = 1e-42
Identities = 78/89 (87%), Positives = 84/89 (94%)
Frame = +3
Query: 387 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 566
KVEKWFG+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E N++IEIR
Sbjct: 54 KVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIR 113
Query: 567 NFLGEKYIXRVKMAPGVTVVNSPKQKDEL 653
NFLGEKYI RV+MAPGVTVVNS QKDEL
Sbjct: 114 NFLGEKYIRRVEMAPGVTVVNSTAQKDEL 142
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 227 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRS 382
M+ I +NQ VKIP + VK+R+VT+ G RG LKR FKHLA+D+ M + R+
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRTFKHLALDMYMPDKRT 52
>BT022718-1|AAY55134.1| 190|Drosophila melanogaster RE74350p
protein.
Length = 190
Score = 170 bits (414), Expect = 1e-42
Identities = 78/89 (87%), Positives = 84/89 (94%)
Frame = +3
Query: 387 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 566
KVEKWFG+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E N++IEIR
Sbjct: 54 KVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIR 113
Query: 567 NFLGEKYIXRVKMAPGVTVVNSPKQKDEL 653
NFLGEKYI RV+MAPGVTVVNS QKDEL
Sbjct: 114 NFLGEKYIRRVEMAPGVTVVNSTAQKDEL 142
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +2
Query: 227 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRS 382
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R+
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRT 52
>AE014134-2010|AAF53049.1| 190|Drosophila melanogaster CG6141-PB,
isoform B protein.
Length = 190
Score = 170 bits (414), Expect = 1e-42
Identities = 78/89 (87%), Positives = 84/89 (94%)
Frame = +3
Query: 387 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 566
KVEKWFG+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E N++IEIR
Sbjct: 54 KVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIR 113
Query: 567 NFLGEKYIXRVKMAPGVTVVNSPKQKDEL 653
NFLGEKYI RV+MAPGVTVVNS QKDEL
Sbjct: 114 NFLGEKYIRRVEMAPGVTVVNSTAQKDEL 142
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +2
Query: 227 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRS 382
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R+
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRT 52
>AE014134-2009|AAF53048.2| 190|Drosophila melanogaster CG6141-PA,
isoform A protein.
Length = 190
Score = 170 bits (414), Expect = 1e-42
Identities = 78/89 (87%), Positives = 84/89 (94%)
Frame = +3
Query: 387 KVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIR 566
KVEKWFG+KKELAAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E N++IEIR
Sbjct: 54 KVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIR 113
Query: 567 NFLGEKYIXRVKMAPGVTVVNSPKQKDEL 653
NFLGEKYI RV+MAPGVTVVNS QKDEL
Sbjct: 114 NFLGEKYIRRVEMAPGVTVVNSTAQKDEL 142
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +2
Query: 227 MKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRS 382
M+ I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R+
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRT 52
>BT029934-1|ABM92808.1| 1442|Drosophila melanogaster IP14638p protein.
Length = 1442
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = -1
Query: 635 WRVNDSHTRCHLYPXDVFLTQEVTYLNN*ITLSGDTVNGEVSIHSTHLVLEAFSYSFNHV 456
W V++ + + +L D T E++Y + I DT++G+ +ST F + H
Sbjct: 1039 WSVSEPY-KVYLQSQDSLWTPELSYYMSLIRRLADTISGKNVFYSTDWRFNEFPNAPTHA 1097
Query: 455 LYM 447
LY+
Sbjct: 1098 LYV 1100
>AE013599-3499|AAF46925.1| 1439|Drosophila melanogaster CG3695-PA
protein.
Length = 1439
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = -1
Query: 635 WRVNDSHTRCHLYPXDVFLTQEVTYLNN*ITLSGDTVNGEVSIHSTHLVLEAFSYSFNHV 456
W V++ + + +L D T E++Y + I DT++G+ +ST F + H
Sbjct: 1037 WSVSEPY-KVYLQSQDSLWTPELSYYMSLIRRLADTISGKNVFYSTDWRFNEFPNAPTHA 1095
Query: 455 LYM 447
LY+
Sbjct: 1096 LYV 1098
>AE014297-4835|AAN14298.1| 436|Drosophila melanogaster CG31001-PA
protein.
Length = 436
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 172 W*TSVRLCFILALVFRPKHEANCS-KSESQNPRRAYGPCE 288
W RLCF ++ PK A C+ + PRR Y E
Sbjct: 196 WNLPYRLCFANQVIAPPKEVARCTVATHGTKPRRRYAHVE 235
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 172 W*TSVRLCFILALVFRPKHEANCS-KSESQNPRRAYGPCE 288
W RLCF ++ PK A C+ + PRR Y E
Sbjct: 384 WNLPYRLCFANQVIAPPKEVARCTVATHGTKPRRIYAHVE 423
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,082,432
Number of Sequences: 53049
Number of extensions: 568713
Number of successful extensions: 930
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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