Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_J11
(576 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 96 2e-20
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 63 2e-10
06_01_0671 - 4899611-4899829,4900870-4901448 62 3e-10
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 58 7e-09
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 56 2e-08
02_01_0691 - 5167260-5167937 41 6e-04
01_03_0105 + 12604125-12604583 31 0.50
07_03_0575 - 19637277-19637681 29 2.0
01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710 29 2.0
07_03_1139 + 24254662-24255306 29 2.7
03_05_0554 - 25551220-25551310,25551562-25551695,25552115-255522... 29 3.5
03_02_0602 + 9759055-9759223,9759305-9759455,9759548-9759593,975... 29 3.5
02_04_0207 + 20933319-20933427,20933503-20933701,20933785-209339... 29 3.5
12_01_1057 - 10899871-10899961,10900255-10900411,10901420-109014... 28 4.6
07_01_0478 - 3605306-3605614,3605766-3605906 28 4.6
02_03_0183 + 16106205-16106474 28 4.6
02_02_0154 + 7263707-7263782,7263908-7264248 28 4.6
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 24 5.2
11_04_0291 - 15851647-15852252,15853995-15854136,15854666-158548... 27 8.1
11_04_0217 + 14979455-14979781 27 8.1
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 95.9 bits (228), Expect = 2e-20
Identities = 45/71 (63%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = +1
Query: 19 NPLPXFKATAVVNGEFKDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKI 195
N P F A AV + EF ++ LSDY GK YV+LFFYPLDFTFVCPTEI AFS++ DEF K+
Sbjct: 72 NKAPDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYDEFEKL 131
Query: 196 GCEVLGASTDS 228
E+LG S DS
Sbjct: 132 NTEILGVSIDS 142
Score = 76.2 bits (179), Expect = 2e-14
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +1
Query: 232 FTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQ 411
F+HLAW+ T RK GGLG + PLISD + IS+ +GVL + GI RGLFIID + ++
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQH 271
Query: 412 ITINDL 429
TIN+L
Sbjct: 272 STINNL 277
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/47 (57%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Frame = +2
Query: 437 GRSVEETLRLVQAFQFT-DKHGEVCPANWRPGAKTIKPDTKAAXEYF 574
GRSV+ET+R +QA Q+ D EVCPA W+PG K++KPD K + EYF
Sbjct: 280 GRSVDETMRTLQALQYVQDNPDEVCPAGWKPGDKSMKPDPKGSKEYF 326
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Frame = +2
Query: 437 GRSVEETLRLVQAFQFTDKH-GEVCPANWRPGAKTIKPDTKAAXEYF 574
GRSV+ETLR +QA Q+ ++ EVCPA W+PG K++KPD K + EYF
Sbjct: 106 GRSVDETLRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKDSKEYF 152
Score = 38.3 bits (85), Expect(2) = 2e-06
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 136 FVCPTEIIAFSEKADEFRKIGCEVLGASTDS 228
FV EI AFS++ +EF KI EVLG S DS
Sbjct: 48 FVSSAEITAFSDRYEEFEKINTEVLGVSIDS 78
Score = 31.1 bits (67), Expect(2) = 2e-06
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 337 GVLDEETGIPFRGLFIIDDKQNLRQITINDL 429
GV + GI RGLFIID + ++ TIN+L
Sbjct: 73 GVSIDSVGIALRGLFIIDKEGVIQHSTINNL 103
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 62.1 bits (144), Expect = 3e-10
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Frame = +1
Query: 73 ISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWI 252
+SLS +KG+ VV++FYP D T C + AF + ++F+K G EV+G S D +H +
Sbjct: 137 VSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDAASHKEF- 195
Query: 253 NTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITIND 426
+K+ L P L+SD+ +++ +++GV + G +P R +++ DK + Q N+
Sbjct: 196 ---KKKYKL-PFT--LLSDEGNKVRKEWGVPADLFGTLPGRQTYVL-DKNGVVQYIYNN 247
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 57.6 bits (133), Expect = 7e-09
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +1
Query: 73 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 249
I + D+ G YV+LF +P DFT VC TE+ A + A EF K G ++LG S D +H W
Sbjct: 57 IRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDW 116
Query: 250 INTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEE 354
I + P+++D S + ++D +
Sbjct: 117 IKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPD 151
Score = 40.7 bits (91), Expect = 8e-04
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 437 GRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKP 547
GR+++E +R V A Q KH P NW+PG + + P
Sbjct: 185 GRNMDEVVRAVDALQTAAKHAVATPVNWKPGERVVIP 221
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 73 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 249
I L D+ G YV++F +P DFT VC TE+ + A EF K G ++LG S D +H W
Sbjct: 22 IRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDW 81
Query: 250 INTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEE 354
I + P+++D R ++D +
Sbjct: 82 IKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDAD 116
Score = 34.3 bits (75), Expect = 0.071
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 437 GRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKP 547
GR++ E LR A +H P NW+PG + + P
Sbjct: 150 GRNMAEVLRATDALLTAARHRVATPVNWKPGERVVIP 186
>02_01_0691 - 5167260-5167937
Length = 225
Score = 41.1 bits (92), Expect = 6e-04
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Frame = +1
Query: 55 NGEFKDISLSDYK-GKYVVLFFYPLDFTFVCPTEII-AFSEKADEFRKIGCEVLGA-STD 225
+GE K +++++ G+ VLF P FT C + + F EKA E G + + S +
Sbjct: 81 DGELKTVTVAELTAGRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVN 140
Query: 226 SHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGV 342
F AW ++ GLG ++ L+SD + ++R GV
Sbjct: 141 DAFVMRAW----KESLGLGDADVLLLSDGNLELTRALGV 175
>01_03_0105 + 12604125-12604583
Length = 152
Score = 31.5 bits (68), Expect = 0.50
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 285 HEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQRPA 431
H+H Q +P +LR GR DG H RRQ Q + +PA
Sbjct: 63 HQHKLFYSQPSPPRAKLRLVGRIDGRKEEAAHHSRRQPSLQKEAAAKPA 111
>07_03_0575 - 19637277-19637681
Length = 134
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = -2
Query: 311 LSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTSQPILRNSSAFSENAMISVGHT 138
+ + G P C R V + K ESV A + +L N F NA VG T
Sbjct: 49 IKFLSNKLSGHEPTCKRIVAVGTGSSKSESVVAVDKVESMLCNLDRFEANAQHEVGPT 106
>01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710
Length = 275
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 262 RKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITI 420
+K+ G G N+P D R ++DY +DE+ +P F I D++ + + +
Sbjct: 65 KKKKGSGAGNLPGAIDAEIREAQDYLAIDEQEPVPENFPFEILDEEGMSVVIL 117
>07_03_1139 + 24254662-24255306
Length = 214
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 9/70 (12%)
Frame = +3
Query: 249 DQHAAQAGRTRPHEHSSDKRQVAPHLPRLR---------SAGRGDGHSLPRTLHHRRQAE 401
D A +T P H D PHLP L +AG P HHR ++
Sbjct: 140 DSSALCCPKTPPPAHRPDPATAVPHLPPLGRDPSPSPLPTAGENSTSPTPEREHHRGESP 199
Query: 402 PQADHDQRPA 431
A +RPA
Sbjct: 200 ADAFLARRPA 209
>03_05_0554 -
25551220-25551310,25551562-25551695,25552115-25552221,
25552359-25552437,25552524-25552613,25552790-25553044,
25553388-25553537,25553677-25553976
Length = 401
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 573 KYSWAALVSGLMVLAPGLQ 517
KY W A+ G MVL PGL+
Sbjct: 370 KYRWKAIKGGTMVLGPGLR 388
>03_02_0602 +
9759055-9759223,9759305-9759455,9759548-9759593,
9759974-9760033,9760519-9760555,9761268-9761347,
9761413-9761516,9761613-9761673,9762962-9763019,
9763866-9763918,9764357-9765320,9766131-9766185,
9767223-9768786
Length = 1133
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = -2
Query: 374 PRKGMPVSSSSTP*SREMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTSQ- 198
P P +ST S D + RG+ G PP L C++C SV A +
Sbjct: 369 PSAAAPTGFASTDRSGGAGRDRAFARGICFGDPPPALS----PQYCLRCLSVAAKELADG 424
Query: 197 -PILRNSSAFSENAMISVGHTNVKS 126
P R ++ +++ S T+ S
Sbjct: 425 CPAKRRAAVWTDGCFASFADTSALS 449
>02_04_0207 +
20933319-20933427,20933503-20933701,20933785-20933931,
20934683-20934764,20935542-20935697,20935948-20936121,
20936278-20936349,20937012-20937083,20937322-20937440,
20937540-20937625,20937747-20937799,20938076-20938153
Length = 448
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -1
Query: 459 RVSSTDLPHGQVVDRDLPEVLLVVDDEESSEGNA 358
R +S L HG++VDR++P+++ D SS+G+A
Sbjct: 363 RGTSGQLGHGEIVDRNIPKMI----DALSSDGSA 392
>12_01_1057 -
10899871-10899961,10900255-10900411,10901420-10901498,
10901618-10901707,10903232-10903486,10903674-10903689,
10903907-10903940,10905653-10905884
Length = 317
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 573 KYSWAALVSGLMVLAPGLQ 517
KY W + G MVL PGLQ
Sbjct: 286 KYRWKVIKGGKMVLCPGLQ 304
>07_01_0478 - 3605306-3605614,3605766-3605906
Length = 149
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 345 GRGDGHSLPRTLHHR 389
G DGH LPRTL HR
Sbjct: 4 GGDDGHGLPRTLSHR 18
>02_03_0183 + 16106205-16106474
Length = 89
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 295 PLISDKSHRISRDYGVLDEETGIP 366
PL S HR SR +G L E +G P
Sbjct: 59 PLASSHEHRFSRLHGCLPESSGFP 82
>02_02_0154 + 7263707-7263782,7263908-7264248
Length = 138
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 365 GMPVSSSSTP*SREMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTS 201
G+ +S +T S + C LSL + PS CL+ A + C + AP S
Sbjct: 25 GVIATSKATSKSYKAACTLSLATCLPSLPSDKCLKAAFAAATSLLCLTAGAPPPS 79
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 23.8 bits (49), Expect(2) = 5.2
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +3
Query: 249 DQHAAQAGRTRPHEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEPQADHDQ 422
DQH + T SS + + P LPR R S +T+H + +A Q
Sbjct: 203 DQHGRGSTATAASSASSPELRPMPPLPRQFQQTRTSMPSTSQTIHEAGAEDKRAPPPQ 260
Score = 22.6 bits (46), Expect(2) = 5.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 108 AVLLSFGLHVRVPDGDHRVLGEG 176
AVLLS G + DGDH G G
Sbjct: 186 AVLLSPGNSTALYDGDHDQHGRG 208
>11_04_0291 -
15851647-15852252,15853995-15854136,15854666-15854881,
15854957-15855052,15855147-15855259,15856516-15856727,
15856842-15856939,15857066-15857186,15857291-15857508,
15857657-15857837,15857919-15858207,15858303-15858367,
15858480-15858591
Length = 822
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +2
Query: 437 GRSVEETLRLVQAFQFTDKHGEV--CPAN 517
G S+EE L LV F D HGE+ C +N
Sbjct: 559 GGSMEEMLNLVALFDKWDDHGEIGFCSSN 587
>11_04_0217 + 14979455-14979781
Length = 108
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 390 VDDEESSEGNARLLVQHSVVAGDAVRLVAYQRNVHGAE 277
+DD+E+ G +L +H VVAG + +R HG +
Sbjct: 67 LDDDENDVGGGHMLCRHGVVAGSDMER-GVKRCSHGVK 103
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,228,704
Number of Sequences: 37544
Number of extensions: 251225
Number of successful extensions: 1045
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -