Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_J11
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin ... 223 7e-59
Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical pr... 194 3e-50
AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical... 56 2e-08
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical p... 29 2.4
Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z69717-3|CAA93534.1| 617|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL009170-1|CAA15637.1| 617|Caenorhabditis elegans Hypothetical ... 27 9.5
AC006651-2|AAP82649.1| 72|Caenorhabditis elegans Hypothetical ... 27 9.5
>U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin
protein 2 protein.
Length = 195
Score = 223 bits (545), Expect = 7e-59
Identities = 103/136 (75%), Positives = 116/136 (85%)
Frame = +1
Query: 22 PLPXFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGC 201
P P FK AVV+GEF D+SLSDYKGKYVVLFFYPLDFTFVCPTEIIAFS++A+EF+ I
Sbjct: 9 PAPQFKTQAVVDGEFVDVSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAEEFKAINT 68
Query: 202 EVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLF 381
VL ASTDS F+HLAWIN PRK GGLG MNIP+++D +H+ISRDYGVL E+ GI FRGLF
Sbjct: 69 VVLAASTDSVFSHLAWINQPRKHGGLGEMNIPVLADTNHQISRDYGVLKEDEGIAFRGLF 128
Query: 382 IIDDKQNLRQITINDL 429
IID QNLRQITINDL
Sbjct: 129 IIDPSQNLRQITINDL 144
Score = 81.8 bits (193), Expect = 3e-16
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = +2
Query: 431 PWGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKPDTKAAXEYF 574
P GRSV+ETLRLVQAFQF +KHGEVCPA W PG+ TIKP K + EYF
Sbjct: 145 PVGRSVDETLRLVQAFQFVEKHGEVCPAGWTPGSDTIKPGVKESQEYF 192
>Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical
protein R07E5.2 protein.
Length = 226
Score = 194 bits (474), Expect = 3e-50
Identities = 84/137 (61%), Positives = 111/137 (81%)
Frame = +1
Query: 19 NPLPXFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIG 198
N +P FK TAVV+G+FK IS DYKGK++V+FFYPLDFTFVCPTEIIA+ ++A+EFR +G
Sbjct: 37 NTVPAFKGTAVVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEIIAYGDRANEFRSLG 96
Query: 199 CEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGL 378
EV+ S DSHF+HLAW+NTPRK GGLG M+IPL++D + +I+ +GVLD+E+G+ +RGL
Sbjct: 97 AEVVACSCDSHFSHLAWVNTPRKDGGLGDMDIPLLADFNKKIADSFGVLDKESGLSYRGL 156
Query: 379 FIIDDKQNLRQITINDL 429
F+ID +R T NDL
Sbjct: 157 FLIDPSGTVRHTTCNDL 173
Score = 72.5 bits (170), Expect = 2e-13
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +2
Query: 431 PWGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTIKPDTKAAXEYF 574
P GRSV+ETLR+++AFQF+DKHGEVCPA+W + TIKP + EYF
Sbjct: 174 PVGRSVDETLRVLKAFQFSDKHGEVCPADWHEDSPTIKPGVATSKEYF 221
>AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical
protein Y38C1AA.11 protein.
Length = 231
Score = 56.0 bits (129), Expect = 2e-08
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Frame = +1
Query: 67 KDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHL 243
K+ +L +Y G+ +++LF +P DFT VC TE+ + A EFRK ++L S DS TH
Sbjct: 18 KNQTLHNYIGEQWLMLFSHPADFTPVCTTELAELVKLAPEFRKRHVQILAISIDSSETHR 77
Query: 244 AW---INTPRKQGGLGP-MNIPLISDKSHRISRDYGVLDEE 354
W IN+ + G + +I+D I + G++D +
Sbjct: 78 DWAKDINSVAQLSNCGSHLPFEIIADTDRSICTELGMIDPD 118
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 434 WGRSVEETLRLVQAFQFTDKHGEVCPANWRPGAKTI 541
+GR+ E LR+V Q K PANW G I
Sbjct: 151 FGRNFVEILRMVDGVQLGTKAPVATPANWIAGDNVI 186
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 285 HEHSSDKRQVAPHLPRLRSAGRGDGHSLPRTLHHRRQAEP 404
HE S K++ + L R G GHS+ T H R +P
Sbjct: 625 HEMWSKKQKKSARLGRQAEGSSGSGHSIRATSHPRAPTQP 664
>Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical
protein F26E4.12 protein.
Length = 163
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 49 VVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVL 210
V N D+SLSDYKGK V++ + E D ++K G EVL
Sbjct: 9 VKNANGDDVSLSDYKGK-VLIIVNVASQCGLTNKNYTQLKELLDVYKKDGLEVL 61
>Z82095-7|CAN86628.1| 390|Caenorhabditis elegans Hypothetical
protein ZK849.2c protein.
Length = 390
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 492 LSVN-WKACTSRRVSSTDLPHGQVVDRDLPEVLLVVDDEESSEGNARLLVQHS 337
LSVN + T + + D+ GQV DL L+ V +E S+ + + ++HS
Sbjct: 310 LSVNGYDLRTVKHQEAVDILSGQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 362
>Z82095-6|CAI79281.2| 412|Caenorhabditis elegans Hypothetical
protein ZK849.2b protein.
Length = 412
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 492 LSVN-WKACTSRRVSSTDLPHGQVVDRDLPEVLLVVDDEESSEGNARLLVQHS 337
LSVN + T + + D+ GQV DL L+ V +E S+ + + ++HS
Sbjct: 332 LSVNGYDLRTVKHQEAVDILSGQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 384
>Z82095-5|CAB05026.2| 414|Caenorhabditis elegans Hypothetical
protein ZK849.2a protein.
Length = 414
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 492 LSVN-WKACTSRRVSSTDLPHGQVVDRDLPEVLLVVDDEESSEGNARLLVQHS 337
LSVN + T + + D+ GQV DL L+ V +E S+ + + ++HS
Sbjct: 334 LSVNGYDLRTVKHQEAVDILSGQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 386
>Z69717-3|CAA93534.1| 617|Caenorhabditis elegans Hypothetical
protein H19J13.1 protein.
Length = 617
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -1
Query: 507 HTSPCLSVNWKACTSRRVSSTDLPHGQVVDRDLPEVLLVVDDEE 376
H+S CL+ WK S + + D H + D +L + + D +E
Sbjct: 565 HSSACLAEIWKHTYSTKSNEYDHEHMSLSDSNLTAITPISDIKE 608
>AL009170-1|CAA15637.1| 617|Caenorhabditis elegans Hypothetical
protein H19J13.1 protein.
Length = 617
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -1
Query: 507 HTSPCLSVNWKACTSRRVSSTDLPHGQVVDRDLPEVLLVVDDEE 376
H+S CL+ WK S + + D H + D +L + + D +E
Sbjct: 565 HSSACLAEIWKHTYSTKSNEYDHEHMSLSDSNLTAITPISDIKE 608
>AC006651-2|AAP82649.1| 72|Caenorhabditis elegans Hypothetical
protein H06I04.7 protein.
Length = 72
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 334 SRGRCGATCRLSEECSWGR 278
+ C A C+ ECSWGR
Sbjct: 34 NNSNCTAYCKEKPECSWGR 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,421,828
Number of Sequences: 27780
Number of extensions: 194040
Number of successful extensions: 721
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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