Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_J09
(655 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 249 1e-66
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 249 2e-66
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 209 1e-54
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 181 4e-46
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 121 6e-28
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 1e-24
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 93 1e-19
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_30795| Best HMM Match : Epimerase (HMM E-Value=0) 29 2.5
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 3.3
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 3.3
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.4
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 7.6
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 7.6
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 249 bits (610), Expect = 1e-66
Identities = 116/146 (79%), Positives = 132/146 (90%)
Frame = +1
Query: 217 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 396
YV FTDTERL+GDAAKNQVA+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD K
Sbjct: 41 YVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNK 100
Query: 397 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVXNAVITVPAYFNDSXRQATXD 576
PKI+V YKGE KTF EE+SSMVL KMKETAEAYLG+ V +AVITVPAYFNDS RQAT D
Sbjct: 101 PKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKD 160
Query: 577 AGTISGLNVLRIINEPTAAAIAYGLD 654
AGTI+GLNVLR+INEPTAAA+AYGLD
Sbjct: 161 AGTIAGLNVLRVINEPTAAALAYGLD 186
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +3
Query: 138 YSCVGVFQHGKVEIIANDQGQQ 203
YSCVGVFQ+GKVEIIANDQG +
Sbjct: 15 YSCVGVFQNGKVEIIANDQGNR 36
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 95 MAKAPAVGIDLGTT 136
M KAPA+GIDLGTT
Sbjct: 1 MGKAPAIGIDLGTT 14
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 249 bits (609), Expect = 2e-66
Identities = 116/146 (79%), Positives = 130/146 (89%)
Frame = +1
Query: 217 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 396
YVAF+DTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +
Sbjct: 41 YVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGER 100
Query: 397 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVXNAVITVPAYFNDSXRQATXD 576
PKI+V +KGE K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVPAYF+DS RQAT D
Sbjct: 101 PKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKD 160
Query: 577 AGTISGLNVLRIINEPTAAAIAYGLD 654
AGTI+GLNVLRIINEPTAAAIAYGLD
Sbjct: 161 AGTIAGLNVLRIINEPTAAAIAYGLD 186
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 138 YSCVGVFQHGKVEIIANDQGQQ 203
YSCVGVFQHGKVEIIANDQG +
Sbjct: 15 YSCVGVFQHGKVEIIANDQGNR 36
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +2
Query: 95 MAKAPAVGIDLGTT 136
MAK PAVGIDLGTT
Sbjct: 1 MAKTPAVGIDLGTT 14
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 209 bits (511), Expect = 1e-54
Identities = 101/147 (68%), Positives = 120/147 (81%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 YVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG 393
YVAFT+ ERLIGD AKNQ+ NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV
Sbjct: 738 YVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNK 797
Query: 394 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVXNAVITVPAYFNDSXRQATX 573
KP ++V K E KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVPAYFND+ RQAT
Sbjct: 798 KPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK 857
Query: 574 DAGTISGLNVLRIINEPTAAAIAYGLD 654
DAG I+GL V+RIINEPTAAAIAYG+D
Sbjct: 858 DAGAIAGLTVMRIINEPTAAAIAYGMD 884
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/22 (77%), Positives = 21/22 (95%)
Frame = +3
Query: 138 YSCVGVFQHGKVEIIANDQGQQ 203
YSCVGVF++G+VEIIANDQG +
Sbjct: 712 YSCVGVFKNGRVEIIANDQGNR 733
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 181 bits (441), Expect = 4e-46
Identities = 96/147 (65%), Positives = 106/147 (72%), Gaps = 25/147 (17%)
Frame = +1
Query: 217 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 396
YVAFTD ERL+GDAAKNQVAMNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+
Sbjct: 41 YVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGR 100
Query: 397 PKIKVAYKGEDKTFFPEEV-------------------------SSMVLTKMKETAEAYL 501
PK+KV YKGE KTFF EEV SSMVL KMKETAEAYL
Sbjct: 101 PKVKVEYKGETKTFFAEEVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYL 160
Query: 502 GKTVXNAVITVPAYFNDSXRQATXDAG 582
G V +AV+TVPAYFNDS RQAT DAG
Sbjct: 161 GCKVTDAVVTVPAYFNDSQRQATKDAG 187
Score = 119 bits (286), Expect = 2e-27
Identities = 58/69 (84%), Positives = 62/69 (89%)
Frame = +1
Query: 448 EVSSMVLTKMKETAEAYLGKTVXNAVITVPAYFNDSXRQATXDAGTISGLNVLRIINEPT 627
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDS RQAT DAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 628 AAAIAYGLD 654
AAAIAYGLD
Sbjct: 271 AAAIAYGLD 279
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 138 YSCVGVFQHGKVEIIANDQGQQ 203
YSCVGVFQHGKVEIIANDQG +
Sbjct: 15 YSCVGVFQHGKVEIIANDQGNR 36
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 95 MAKAPAVGIDLGTT 136
M KAPA+GIDLGTT
Sbjct: 1 MTKAPAIGIDLGTT 14
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 121 bits (291), Expect = 6e-28
Identities = 65/145 (44%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Frame = +1
Query: 220 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GK 396
VAFTD L+G+ A +Q +NP NTI+DAKR IG+ F + K + F V +D G
Sbjct: 71 VAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGN 130
Query: 397 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVXNAVITVPAYFNDSXRQATXD 576
V KG PEE+ V+ K++ AE L TV AV++VPA F+ R AT
Sbjct: 131 AGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVK 190
Query: 577 AGTISGLNVLRIINEPTAAAIAYGL 651
A +++G+ VLR+INEPTAAA+AYGL
Sbjct: 191 AASLAGITVLRVINEPTAAALAYGL 215
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 110 bits (264), Expect = 1e-24
Identities = 54/125 (43%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Frame = +1
Query: 280 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 456
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 457 SMVLTKMKETAEAYLGKTVXNAVITVPAYFNDSXRQATXDAGTISGLNVLRIINEPTAAA 636
+M+ T++K TAE L V + VI+VP+Y+ D R+ DA +GLN LR++N+ TA +
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVS 237
Query: 637 IAYGL 651
+AYG+
Sbjct: 238 LAYGI 242
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 93.5 bits (222), Expect = 1e-19
Identities = 56/108 (51%), Positives = 70/108 (64%), Gaps = 24/108 (22%)
Frame = +1
Query: 403 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVXNAVITVPAYFNDSXRQATXDAG 582
I V GE ++F PE++S++VL ++K AEA+LG+ V AVITVPA+FND+ RQAT DAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 583 TISGLN------------------------VLRIINEPTAAAIAYGLD 654
TI+GL+ VLRIINEPTAAAIAYGLD
Sbjct: 62 TIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLD 109
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 68.5 bits (160), Expect = 4e-12
Identities = 34/85 (40%), Positives = 50/85 (58%)
Frame = +1
Query: 397 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVXNAVITVPAYFNDSXRQATXD 576
P +K Y+ D TF PEE+ M+L + E + + + V+TVP +FN + R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 577 AGTISGLNVLRIINEPTAAAIAYGL 651
A + GLNVL+I+N TA A+ YGL
Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYGL 151
>SB_30795| Best HMM Match : Epimerase (HMM E-Value=0)
Length = 869
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 62 RTSNKTD*KYKMAKAPAVGIDLGTTXLLRWCLPAREGG 175
R++ K+D +K KAP G G + RW PA E G
Sbjct: 558 RSAEKSDAIHKEKKAPRGGRSGGPSQRKRWTAPAEEDG 595
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 301 RILCCWGSSPPGSWRH 254
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 301 RILCCWGSSPPGSWRH 254
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 41 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 127
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -3
Query: 491 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 312
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 311 RLASNIVL 288
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +3
Query: 228 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALA 368
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -3
Query: 365 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 219
QCF+S C + S + + R+ L TW + + M S +AT
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,577,610
Number of Sequences: 59808
Number of extensions: 411240
Number of successful extensions: 1035
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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