BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_J09
(655 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY137766-1|AAM94344.1| 78|Anopheles gambiae heat shock protein... 84 3e-18
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 24 4.8
>AY137766-1|AAM94344.1| 78|Anopheles gambiae heat shock protein 70
protein.
Length = 78
Score = 84.2 bits (199), Expect = 3e-18
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = +1
Query: 517 NAVITVPAYFNDSXRQATXDAGTISGLNVLRIINEPTAAAIAYGLD 654
+AVITVPAYFNDS RQAT DAG I+GLNV+RIINEPTAAA+AYGLD
Sbjct: 1 DAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLD 46
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 23.8 bits (49), Expect = 4.8
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -1
Query: 208 WSCXPWSLAMISTFPCWKTPTQE 140
W C WS+A T C +T E
Sbjct: 21 WDCTVWSMASNRTVRCPRTRRSE 43
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,496
Number of Sequences: 2352
Number of extensions: 12256
Number of successful extensions: 19
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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