Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_J08
(575 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 307 5e-84
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 307 5e-84
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 305 2e-83
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 304 4e-83
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 301 3e-82
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 296 1e-80
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 291 4e-79
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 253 7e-68
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 218 2e-57
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 2e-40
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 5e-39
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 143 1e-34
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 140 7e-34
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 136 2e-32
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 134 6e-32
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 132 1e-31
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 132 2e-31
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 3e-22
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 98 4e-21
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 90 1e-18
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 5e-16
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 80 1e-15
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 51 6e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 47 1e-05
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 43 2e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 33 0.17
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 2.1
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 29 2.7
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028) 28 4.8
SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 307 bits (753), Expect = 5e-84
Identities = 140/158 (88%), Positives = 144/158 (91%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHYT+GKEIV LVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIRKLADQCTGLQGFLIFH LLM RLS
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 158
Score = 305 bits (749), Expect = 2e-83
Identities = 140/157 (89%), Positives = 143/157 (91%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 284
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 285 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEIV LVLDR
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 465 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
IRKLADQCTGLQGFLIFH LLM RLS
Sbjct: 555 IRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 591
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 307 bits (753), Expect = 5e-84
Identities = 143/160 (89%), Positives = 144/160 (90%)
Frame = +3
Query: 96 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 275
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 276 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLV 455
GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIV LV
Sbjct: 123 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 182
Query: 456 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
LDRIRKLADQCTGLQGFLIFH LLM RLS
Sbjct: 183 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 222
Score = 304 bits (747), Expect = 3e-83
Identities = 138/158 (87%), Positives = 144/158 (91%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++ LVLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIRKLADQCTGLQGFLIFH LLM RLS
Sbjct: 706 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 743
Score = 163 bits (397), Expect = 7e-41
Identities = 71/73 (97%), Positives = 73/73 (100%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 284
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 285 VPRAVFVDLEPTV 323
VPRAVFVDLEPTV
Sbjct: 574 VPRAVFVDLEPTV 586
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 305 bits (748), Expect = 2e-83
Identities = 139/157 (88%), Positives = 143/157 (91%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 284
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 285 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKEI+ LVLDR
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 465 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
IRKLADQCTGLQGFLIFH LLM RLS
Sbjct: 121 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLS 157
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 304 bits (746), Expect = 4e-83
Identities = 139/158 (87%), Positives = 143/158 (90%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI+ LVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
R RKLADQCTGLQGFLIFH LLM RLS
Sbjct: 121 RCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLS 158
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 301 bits (739), Expect = 3e-82
Identities = 137/157 (87%), Positives = 142/157 (90%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 284
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 285 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++ LVLDR
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 465 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
IRKLADQCTGLQGFLIFH LLM RLS
Sbjct: 926 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLS 962
Score = 295 bits (723), Expect = 2e-80
Identities = 132/157 (84%), Positives = 141/157 (89%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 284
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 285 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE + +VLDR
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 465 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
+RKLAD CTGLQGFLIFH LLM RLS
Sbjct: 493 LRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLS 529
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 296 bits (726), Expect = 1e-80
Identities = 134/158 (84%), Positives = 141/158 (89%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++ VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
R+RKLAD CTGLQGFLIFH LLM RLS
Sbjct: 121 RLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 158
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 291 bits (713), Expect = 4e-79
Identities = 128/157 (81%), Positives = 141/157 (89%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 284
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 285 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VPRAVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK+ + VLDR
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 465 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
IRKLADQC+GLQGFL+FH LL+ RLS
Sbjct: 540 IRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLS 576
Score = 269 bits (659), Expect = 1e-72
Identities = 120/143 (83%), Positives = 128/143 (89%)
Frame = +3
Query: 147 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 326
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVF DLEPTVV
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 327 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQCTGLQGF 506
DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GK+++ +VLDR+RKLADQCTGLQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 507 LIFHXXXXXXXXXXXXLLMXRLS 575
LIFH LLM RLS
Sbjct: 121 LIFHSFGGGTGSGFSSLLMERLS 143
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 253 bits (620), Expect = 7e-68
Identities = 122/158 (77%), Positives = 127/158 (80%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAVFVDLEPTVV PEQLITGKEDAANNYARGHYTIGK+ V VLD
Sbjct: 61 HVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
R+RKLADQC+GLQGF IFH LLM RLS
Sbjct: 111 RLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLS 148
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 218 bits (533), Expect = 2e-57
Identities = 99/123 (80%), Positives = 107/123 (86%)
Frame = +3
Query: 207 MPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG 386
MP+DKTIGGGDDSFNTFF+ETGAGKHVPRAVFVDLEPTV+DE+RTGTYRQLFHPEQL++G
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSG 60
Query: 387 KEDAANNYARGHYTIGKEIVXLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMX 566
KEDAANNYARGHYT+GKE + L LDRIRKLADQCTGLQGFLIFH LLM
Sbjct: 61 KEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLME 120
Query: 567 RLS 575
RLS
Sbjct: 121 RLS 123
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 162 bits (394), Expect = 2e-40
Identities = 71/79 (89%), Positives = 75/79 (94%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 282 HVPRAVFVDLEPTVVDEVR 338
HVPRAVFVDLEP+VV ++
Sbjct: 61 HVPRAVFVDLEPSVVGRMK 79
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 157 bits (382), Expect = 5e-39
Identities = 71/105 (67%), Positives = 83/105 (79%)
Frame = +3
Query: 261 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKE 440
SE AGK+VPRAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIGKE
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 441 IVXLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
+V +V+D+IRK+ DQC+GLQGFLIFH L+ LS
Sbjct: 1025 MVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLS 1069
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 143 bits (346), Expect = 1e-34
Identities = 66/85 (77%), Positives = 70/85 (82%)
Frame = +3
Query: 321 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQCTGLQ 500
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++ LVLDRIRKLADQCTGLQ
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQ 70
Query: 501 GFLIFHXXXXXXXXXXXXLLMXRLS 575
GFLIFH LLM RLS
Sbjct: 71 GFLIFHSFGGGTGSGFSSLLMERLS 95
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 140 bits (339), Expect = 7e-34
Identities = 65/82 (79%), Positives = 68/82 (82%)
Frame = +3
Query: 330 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQCTGLQGFL 509
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++ LVLDRIRKLADQCTGLQGFL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 510 IFHXXXXXXXXXXXXLLMXRLS 575
IFH LLM RLS
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLS 83
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 136 bits (328), Expect = 2e-32
Identities = 67/162 (41%), Positives = 91/162 (56%)
Frame = +3
Query: 87 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 266
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNE 266
Query: 267 TGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIV 446
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+V
Sbjct: 267 ATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELV 326
Query: 447 XLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRL 572
VLD +RK A+ C LQGF + H LL+ ++
Sbjct: 327 DSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKI 368
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 134 bits (323), Expect = 6e-32
Identities = 61/82 (74%), Positives = 66/82 (80%)
Frame = +3
Query: 330 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQCTGLQGFL 509
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE + L LDRIRKLADQCTGLQGFL
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 510 IFHXXXXXXXXXXXXLLMXRLS 575
IFH LLM RLS
Sbjct: 62 IFHSFGGGTGSGFSSLLMERLS 83
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 132 bits (320), Expect = 1e-31
Identities = 64/157 (40%), Positives = 89/157 (56%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+V VLD
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRL 572
+RK A+ C LQGF + H LL+ ++
Sbjct: 119 VVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKI 155
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 132 bits (319), Expect = 2e-31
Identities = 62/157 (39%), Positives = 91/157 (57%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPR+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++ VLD
Sbjct: 59 YVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLD 118
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRL 572
+RK A+ C +QGF + H LL+ ++
Sbjct: 119 VVRKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKI 155
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 116 bits (279), Expect = 1e-26
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 282 H 284
H
Sbjct: 256 H 256
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +3
Query: 471 KLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
K ADQCTGLQGFL+FH LLM RLS
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLS 289
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 101 bits (243), Expect = 3e-22
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = +3
Query: 330 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKL 476
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++ LVLDRIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/99 (44%), Positives = 62/99 (62%)
Frame = +3
Query: 276 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLV 455
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+V V
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 456 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRL 572
LD +RK A+ C +QGF + H LL+ ++
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKI 100
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 89.8 bits (213), Expect = 1e-18
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = +3
Query: 330 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKL 476
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+GKE + L L++IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 81.4 bits (192), Expect = 5e-16
Identities = 38/93 (40%), Positives = 53/93 (56%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 380
+VPRA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 80.2 bits (189), Expect = 1e-15
Identities = 33/99 (33%), Positives = 56/99 (56%)
Frame = +3
Query: 276 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLV 455
G++VPR++ VDLEP +D VR G +F P+ + + AANN+A+GHY+ G E++ +
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 456 LDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRL 572
D +RK A+ C +QG + L++ ++
Sbjct: 73 FDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKI 111
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = +3
Query: 387 KEDAANNYARGHYTIGKEIVXLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMX 566
+ AANN+A+G YT G E++ +D IRKLA+ C +QGF I H LL+
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 567 RL 572
++
Sbjct: 62 KI 63
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Frame = +3
Query: 114 ISVHVGQAGVQIGNACWELYCLEHGIQPDG-----QMPTDKTIGGGDDSFNTFFSETGAG 278
+++ +GQ G QIG ++L +E + + ++ T ++S FF+
Sbjct: 4 VTLQLGQCGNQIGRELFDLI-VEDATKLNSRFLCKELTTRSCTEYEEESLARFFTRENDD 62
Query: 279 KHVPRAVFVDLEPTVVDEV-----RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 443
RAV +D+E V+ + ++GT+R + Q + K + NN+A G G +
Sbjct: 63 ILNARAVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHGFSEHGPKS 120
Query: 444 VXLVLDRIRKLADQCTGLQGFL 509
+ VLD +++ ++C L GFL
Sbjct: 121 IDKVLDLVQREVEKCDRLDGFL 142
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/33 (60%), Positives = 20/33 (60%)
Frame = +3
Query: 477 ADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
ADQCTGLQGFLIFH LLM RLS
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 33
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 291 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 410
RAV +D+E VV+ + G +F +QLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKT-IGGGDDSFNTFFSETGAG 278
+ C S + +GV+ G W L + GIQP P+D + D +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 279 KHVP-RAVFVDLEP 317
KH P R V L P
Sbjct: 296 KHAPVRTFSVTLRP 309
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 288 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 437
P V+ L T VD+V+TG PEQL+ K++A+ RG + + K
Sbjct: 126 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMERGGFQLHK 171
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 162 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 266
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -3
Query: 237 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 127
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 183 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 299
+GI+PDGQ D+ +NT F G P A+
Sbjct: 708 NGIRPDGQGLVDEGFKTASGIYNTCFERLGMNFQTPEAI 746
>SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028)
Length = 302
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 332 GPHWHIQTVVSSRTTYYW*GRCGQQLCPWSLHHWKGN 442
G HW+ T + +W G G + W HW GN
Sbjct: 48 GKHWYGNTGTKTLIWKHWYGNTGTKTLIWK--HWYGN 82
>SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2429
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -1
Query: 344 ASADLINNSRFKID-EDSTGYVLASSGLAEESVERIVSTP 228
ASAD + + ID +D++G L SGL EE +E IV P
Sbjct: 1043 ASADKVKSPVLSIDLKDTSGQKLEISGLKEE-IELIVEGP 1081
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,916,660
Number of Sequences: 59808
Number of extensions: 412614
Number of successful extensions: 1044
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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