Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_J08
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 281 3e-76
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 281 3e-76
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 281 3e-76
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 279 1e-75
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 254 3e-68
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 254 3e-68
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 253 8e-68
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 253 8e-68
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 252 2e-67
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 252 2e-67
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 248 2e-66
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 248 2e-66
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 234 4e-62
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 233 9e-62
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 214 4e-56
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 189 1e-48
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 137 6e-33
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 136 1e-32
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 136 1e-32
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 134 6e-32
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 134 6e-32
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 131 4e-31
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 117 7e-27
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 117 7e-27
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 76 2e-14
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 76 2e-14
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.34
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 2.4
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 2.4
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 2.4
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 29 3.1
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 29 3.1
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 29 3.1
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 29 3.1
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 29 3.1
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 29 3.1
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 29 3.1
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 29 3.1
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 4.1
U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone... 27 9.5
AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear recep... 27 9.5
AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear recep... 27 9.5
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 281 bits (689), Expect = 3e-76
Identities = 125/158 (79%), Positives = 138/158 (87%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ L LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIR+LAD CTGLQGFL+FH LLM RLS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLS 158
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 281 bits (689), Expect = 3e-76
Identities = 125/158 (79%), Positives = 138/158 (87%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ L LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIR+LAD CTGLQGFL+FH LLM RLS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLS 158
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 281 bits (689), Expect = 3e-76
Identities = 125/158 (79%), Positives = 138/158 (87%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ L LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIR+LAD CTGLQGFL+FH LLM RLS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLS 158
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 279 bits (684), Expect = 1e-75
Identities = 124/157 (78%), Positives = 137/157 (87%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 284
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 285 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+ L LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 465 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
IR+LAD CTGLQGFL+FH LLM RLS
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLS 157
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 254 bits (622), Expect = 3e-68
Identities = 114/158 (72%), Positives = 132/158 (83%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIR+LAD C+GLQGF +FH LLM RLS
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLS 156
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 254 bits (622), Expect = 3e-68
Identities = 114/158 (72%), Positives = 132/158 (83%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIR+LAD C+GLQGF +FH LLM RLS
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLS 156
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 253 bits (619), Expect = 8e-68
Identities = 113/158 (71%), Positives = 132/158 (83%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIR+LAD C+GLQGF +FH LLM RLS
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLS 156
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 253 bits (619), Expect = 8e-68
Identities = 113/158 (71%), Positives = 132/158 (83%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIR+LAD C+GLQGF +FH LLM RLS
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLS 156
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 252 bits (616), Expect = 2e-67
Identities = 111/158 (70%), Positives = 130/158 (82%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++ +V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
R+R+L ++C LQGFLIFH L+M RLS
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLS 158
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 252 bits (616), Expect = 2e-67
Identities = 111/159 (69%), Positives = 130/159 (81%)
Frame = +3
Query: 99 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 278
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 279 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVL 458
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+ +V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 459 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
DR+R+L + C GLQGFL+FH LLM RLS
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLS 163
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 248 bits (607), Expect = 2e-66
Identities = 111/158 (70%), Positives = 130/158 (82%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIR+LAD C+GLQGF +FH LLM RLS
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLS 156
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 248 bits (607), Expect = 2e-66
Identities = 111/158 (70%), Positives = 130/158 (82%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++ LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIR+LAD C+GLQGF +FH LLM RLS
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLS 156
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 234 bits (572), Expect = 4e-62
Identities = 106/158 (67%), Positives = 122/158 (77%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+ LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIR+LA+ C GLQGF +FH +LM RLS
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLS 155
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 233 bits (569), Expect = 9e-62
Identities = 105/157 (66%), Positives = 123/157 (78%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 284
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 285 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++ +V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 465 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
+++LA+ C GLQGF+IFH LLM RLS
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLS 164
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 214 bits (522), Expect = 4e-56
Identities = 95/157 (60%), Positives = 115/157 (73%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 284
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 285 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++ +VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 465 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
IRK + C GLQGFL+FH LLM RLS
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLS 161
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 189 bits (460), Expect = 1e-48
Identities = 85/136 (62%), Positives = 103/136 (75%)
Frame = +3
Query: 168 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 347
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 348 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADQCTGLQGFLIFHXXX 527
YR LFHPEQL++GKEDAAN YARG YTIG+E++ +V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 528 XXXXXXXXXLLMXRLS 575
LLM RLS
Sbjct: 121 GGTGSGFLSLLMERLS 136
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 137 bits (331), Expect = 6e-33
Identities = 66/139 (47%), Positives = 87/139 (62%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 462 RIRKLADQCTGLQGFLIFH 518
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAEGCDCLQGFQLTH 137
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 136 bits (329), Expect = 1e-32
Identities = 66/139 (47%), Positives = 88/139 (63%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 462 RIRKLADQCTGLQGFLIFH 518
IRK A+ C LQGF + H
Sbjct: 119 VIRKEAEGCDCLQGFQLTH 137
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 136 bits (328), Expect = 1e-32
Identities = 66/139 (47%), Positives = 88/139 (63%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 462 RIRKLADQCTGLQGFLIFH 518
IRK A+ C LQGF + H
Sbjct: 119 VIRKEAEGCDCLQGFQLTH 137
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 134 bits (323), Expect = 6e-32
Identities = 64/139 (46%), Positives = 87/139 (62%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 462 RIRKLADQCTGLQGFLIFH 518
+RK A+ LQGF + H
Sbjct: 119 VVRKEAESTDCLQGFQLTH 137
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 134 bits (323), Expect = 6e-32
Identities = 64/139 (46%), Positives = 87/139 (62%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+V VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 462 RIRKLADQCTGLQGFLIFH 518
+RK A+ LQGF + H
Sbjct: 119 VVRKEAESTDCLQGFQLTH 137
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 131 bits (316), Expect = 4e-31
Identities = 63/139 (45%), Positives = 83/139 (59%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+V VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 462 RIRKLADQCTGLQGFLIFH 518
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAESCDCLQGFQMTH 137
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 117 bits (281), Expect = 7e-27
Identities = 61/157 (38%), Positives = 87/157 (55%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIV VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRL 572
IR+ A+ L+GF + H LL+ +L
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKL 155
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 117 bits (281), Expect = 7e-27
Identities = 61/157 (38%), Positives = 87/157 (55%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIV VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRL 572
IR+ A+ L+GF + H LL+ +L
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKL 155
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 75.8 bits (178), Expect = 2e-14
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Frame = +3
Query: 114 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 293
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 294 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVXLVLDR 464
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 465 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRL 572
I + A+ L G L H LL+ RL
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERL 159
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 75.8 bits (178), Expect = 2e-14
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Frame = +3
Query: 114 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 293
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 294 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVXLVLDR 464
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 465 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRL 572
I + A+ L G L H LL+ RL
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERL 159
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.34
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 130 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 285
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 144 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 323
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 324 VDE 332
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 144 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 323
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 324 VDE 332
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 144 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 323
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 324 VDE 332
DE
Sbjct: 116 ADE 118
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 321 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 321 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 321 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 321 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 321 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 321 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 321 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 321 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLDR 464
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 392 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 297
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 252 TFFSETGAGKHVPRAVFVDLEPTVVD 329
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 252 TFFSETGAGKHVPRAVFVDLEPTVVD 329
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 423
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 252 TFFSETGAGKHVPRAVFVDLEPTVVD 329
T ++ TG+GK++ F DL P + D
Sbjct: 131 TTYTSTGSGKNIEYITFFDLTPIIKD 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,636,308
Number of Sequences: 27780
Number of extensions: 296823
Number of successful extensions: 727
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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