Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_J08
(575 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 291 3e-79
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 291 3e-79
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 289 7e-79
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 289 7e-79
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 271 2e-73
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 271 2e-73
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 260 6e-70
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 137 6e-33
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 135 2e-32
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 134 5e-32
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 134 5e-32
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 133 9e-32
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 132 1e-31
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 132 2e-31
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 131 4e-31
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 127 5e-30
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 101 3e-22
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 101 5e-22
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 1.3
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 2.2
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 29 2.2
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.9
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 27 6.8
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 27 6.8
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 27 6.8
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 27 6.8
At5g04660.1 68418.m00474 cytochrome P450, putative cytochrome P4... 27 6.8
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 6.8
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 6.8
At1g18260.1 68414.m02277 suppressor of lin-12-like protein-relat... 27 6.8
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 27 9.0
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 27 9.0
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 291 bits (713), Expect = 3e-79
Identities = 129/158 (81%), Positives = 142/158 (89%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIV L LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIRKLAD CTGLQGFL+F+ LL+ RLS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 291 bits (713), Expect = 3e-79
Identities = 129/158 (81%), Positives = 142/158 (89%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIV L LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIRKLAD CTGLQGFL+F+ LL+ RLS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 289 bits (710), Expect = 7e-79
Identities = 129/158 (81%), Positives = 141/158 (89%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIV L LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIRKLAD CTGLQGFL+F+ LL+ RLS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 289 bits (710), Expect = 7e-79
Identities = 129/158 (81%), Positives = 141/158 (89%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIV L LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
RIRKLAD CTGLQGFL+F+ LL+ RLS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 271 bits (665), Expect = 2e-73
Identities = 120/158 (75%), Positives = 136/158 (86%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIV L LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
R+RKLAD CTGLQGFL+F+ LL+ RLS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 271 bits (665), Expect = 2e-73
Identities = 120/158 (75%), Positives = 136/158 (86%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIV L LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
R+RKLAD CTGLQGFL+F+ LL+ RLS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 260 bits (636), Expect = 6e-70
Identities = 113/158 (71%), Positives = 134/158 (84%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIV L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 462 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMXRLS 575
R+RKLAD CTGLQGFL+F+ LL+ RLS
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLS 158
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 137 bits (331), Expect = 6e-33
Identities = 63/142 (44%), Positives = 89/142 (62%), Gaps = 3/142 (2%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 272
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEAS 55
Query: 273 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXL 452
G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++
Sbjct: 56 CGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 453 VLDRIRKLADQCTGLQGFLIFH 518
VLD +RK A+ C LQGF + H
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCH 137
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 135 bits (327), Expect = 2e-32
Identities = 61/139 (43%), Positives = 87/139 (62%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGR 59
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++ VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 462 RIRKLADQCTGLQGFLIFH 518
+RK A+ C LQGF + H
Sbjct: 120 VVRKEAENCDCLQGFQVCH 138
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 134 bits (323), Expect = 5e-32
Identities = 61/139 (43%), Positives = 85/139 (61%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++ VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 462 RIRKLADQCTGLQGFLIFH 518
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 134 bits (323), Expect = 5e-32
Identities = 61/139 (43%), Positives = 85/139 (61%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++ VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 462 RIRKLADQCTGLQGFLIFH 518
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 133 bits (321), Expect = 9e-32
Identities = 62/139 (44%), Positives = 86/139 (61%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++ VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 462 RIRKLADQCTGLQGFLIFH 518
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 132 bits (320), Expect = 1e-31
Identities = 60/139 (43%), Positives = 87/139 (62%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++ VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 462 RIRKLADQCTGLQGFLIFH 518
+RK A+ C LQGF + H
Sbjct: 120 VVRKEAENCDCLQGFQVCH 138
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 132 bits (318), Expect = 2e-31
Identities = 61/139 (43%), Positives = 87/139 (62%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++ VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 462 RIRKLADQCTGLQGFLIFH 518
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 131 bits (316), Expect = 4e-31
Identities = 60/139 (43%), Positives = 85/139 (61%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGR 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++ VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 462 RIRKLADQCTGLQGFLIFH 518
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 127 bits (307), Expect = 5e-30
Identities = 60/139 (43%), Positives = 85/139 (61%)
Frame = +3
Query: 102 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 281
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGK 58
Query: 282 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVXLVLD 461
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++ VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 462 RIRKLADQCTGLQGFLIFH 518
+RK A+ LQGF + H
Sbjct: 119 VVRKEAENSDCLQGFQVCH 137
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 101 bits (242), Expect = 3e-22
Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 284
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 285 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVXLVL 458
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 459 DRIRKLADQCTGLQGFLIFH 518
D I + AD L+GF++ H
Sbjct: 120 DMIDREADGSDSLEGFVLCH 139
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 101 bits (241), Expect = 5e-22
Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Frame = +3
Query: 105 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 284
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 285 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVXLVL 458
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 459 DRIRKLADQCTGLQGFLIFH 518
D I + AD L+GF++ H
Sbjct: 120 DMIDREADGSDSLEGFVLCH 139
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 180 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 329
E GIQ +G + ++ + G D +T F + A P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 271 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 146
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -1
Query: 308 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDS 138
+ E G+ + SG + E + ++ D + H A DA+++ T +D
Sbjct: 748 VGEQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDV 807
Query: 137 G-LANVYRDALTHF 99
G ANVYR LTHF
Sbjct: 808 GSAANVYRIVLTHF 821
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 28.7 bits (61), Expect = 2.9
Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 3/108 (2%)
Frame = -1
Query: 539 AGTSTEGVEDQESLQTGTLVSELADSVQNQXYDFLSNXXXXXXXXXGRIFLTSNKLFWMK 360
+G TEGVED S LV D ++ Q D + IF L +++
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDS-----SYGNEEIFEAFQSLLYVR 663
Query: 359 QLSVCASADLINNSR---FKIDEDSTGYVLASSGLAEESVERIVSTPD 225
L +++ F++ S +AS LA E+I D
Sbjct: 664 DLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKD 711
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 6.8
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 308 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLA 129
I E S G +A+ V R V T +G + +DA++QA KLP I + G+
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVG 293
Query: 128 NVYRDALTHFD 96
+ D + FD
Sbjct: 294 DGPWDMMREFD 304
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 6.8
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 308 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLA 129
I E S G +A+ V R V T +G + +DA++QA KLP I + G+
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVG 293
Query: 128 NVYRDALTHFD 96
+ D + FD
Sbjct: 294 DGPWDMMREFD 304
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 6.8
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 308 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLA 129
I E S G +A+ V R V T +G + +DA++QA KLP I + G+
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVG 293
Query: 128 NVYRDALTHFD 96
+ D + FD
Sbjct: 294 DGPWDMMREFD 304
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 6.8
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 308 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLA 129
I E S G +A+ V R V T +G + +DA++QA KLP I + G+
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVG 293
Query: 128 NVYRDALTHFD 96
+ D + FD
Sbjct: 294 DGPWDMMREFD 304
>At5g04660.1 68418.m00474 cytochrome P450, putative cytochrome P450
77A3p, Glycine max., PIR:T05948
Length = 512
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 267 TGAGKHVPRAVFVDLE-PTVVDEVRTGTYRQLFHPEQLITGKEDA 398
T AG +P V V++ P + ++ R + F P++ + GKEDA
Sbjct: 392 TLAGYDIPAGVNVEVYLPGISEDPRIWNNPKKFDPDRFMLGKEDA 436
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 6.8
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 471 CGFCPKPNXRFPFQWCSDHGHSCWPHLPYQ 382
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 6.8
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 471 CGFCPKPNXRFPFQWCSDHGHSCWPHLPYQ 382
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
>At1g18260.1 68414.m02277 suppressor of lin-12-like protein-related
/ sel-1 protein-related similar to Sel-1 homolog
precursor (Suppressor of lin-12-like protein)
(Sel-1L)(SP:Q9UBV2) {Homo sapiens}
Length = 678
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +3
Query: 237 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPE 371
+D N+ + G G+ F + EP +E+ G++R +F P+
Sbjct: 34 NDDLNSGGDDNGVGESSDFDEFGESEPKSEEELDPGSWRSIFEPD 78
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 213 WASGHQAGCRAPGSKAPSRHYRSGLR 136
W+SGHQ CR G + ++GLR
Sbjct: 90 WSSGHQRNCRDYGITTLTPSAKNGLR 115
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 311 KIDEDSTGYVLASSGLAEESVERIVSTPD 225
+++ DS+GYVL G + SVE + + D
Sbjct: 336 QVELDSSGYVLVREGTSNTSVEGVFAAGD 364
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,971,150
Number of Sequences: 28952
Number of extensions: 280754
Number of successful extensions: 874
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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