Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_J04
(648 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001880-1|AAN71654.1| 142|Drosophila melanogaster SD12036p pro... 127 1e-29
BT001835-1|AAN71590.1| 130|Drosophila melanogaster RH49003p pro... 125 6e-29
BT001757-1|AAN71512.1| 130|Drosophila melanogaster RH06221p pro... 125 6e-29
AE014297-1319|AAN13512.1| 130|Drosophila melanogaster CG6783-PB... 125 6e-29
AE014297-1318|AAN13511.1| 157|Drosophila melanogaster CG6783-PC... 125 6e-29
BT012432-1|AAS93703.1| 117|Drosophila melanogaster RH70437p pro... 89 4e-18
BT003449-1|AAO39452.1| 117|Drosophila melanogaster RH46282p pro... 89 4e-18
AE014297-1320|AAF54655.2| 117|Drosophila melanogaster CG6783-PA... 89 4e-18
>BT001880-1|AAN71654.1| 142|Drosophila melanogaster SD12036p
protein.
Length = 142
Score = 127 bits (306), Expect = 1e-29
Identities = 57/97 (58%), Positives = 73/97 (75%)
Frame = +3
Query: 84 KMEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKT 263
KM FVGKKYK+ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T+STFKT
Sbjct: 12 KMSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKT 71
Query: 264 TEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 374
+ + FK G EF+E+ DG VKS+ T +GN L Q QK
Sbjct: 72 SAISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQK 108
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 397 TYVREFGPEEMKAVMTAKDVTCTRVYK 477
T VREF E+ +T +V C RVYK
Sbjct: 114 TIVREFTDNELITTLTIGNVKCVRVYK 140
>BT001835-1|AAN71590.1| 130|Drosophila melanogaster RH49003p
protein.
Length = 130
Score = 125 bits (301), Expect = 6e-29
Identities = 56/96 (58%), Positives = 72/96 (75%)
Frame = +3
Query: 87 MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 266
M FVGKKYK+ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+
Sbjct: 1 MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60
Query: 267 EMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 374
+ FK G EF+E+ DG VKS+ T +GN L Q QK
Sbjct: 61 AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQK 96
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 397 TYVREFGPEEMKAVMTAKDVTCTRVYK 477
T VREF E+ +T +V C RVYK
Sbjct: 102 TIVREFTDNELITTLTIGNVKCVRVYK 128
>BT001757-1|AAN71512.1| 130|Drosophila melanogaster RH06221p
protein.
Length = 130
Score = 125 bits (301), Expect = 6e-29
Identities = 56/96 (58%), Positives = 72/96 (75%)
Frame = +3
Query: 87 MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 266
M FVGKKYK+ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+
Sbjct: 1 MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60
Query: 267 EMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 374
+ FK G EF+E+ DG VKS+ T +GN L Q QK
Sbjct: 61 AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQK 96
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 397 TYVREFGPEEMKAVMTAKDVTCTRVYK 477
T VREF E+ +T +V C RVYK
Sbjct: 102 TIVREFTDNELITTLTIGNVKCVRVYK 128
>AE014297-1319|AAN13512.1| 130|Drosophila melanogaster CG6783-PB,
isoform B protein.
Length = 130
Score = 125 bits (301), Expect = 6e-29
Identities = 56/96 (58%), Positives = 72/96 (75%)
Frame = +3
Query: 87 MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 266
M FVGKKYK+ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+
Sbjct: 1 MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60
Query: 267 EMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 374
+ FK G EF+E+ DG VKS+ T +GN L Q QK
Sbjct: 61 AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQK 96
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 397 TYVREFGPEEMKAVMTAKDVTCTRVYK 477
T VREF E+ +T +V C RVYK
Sbjct: 102 TIVREFTDNELITTLTIGNVKCVRVYK 128
>AE014297-1318|AAN13511.1| 157|Drosophila melanogaster CG6783-PC,
isoform C protein.
Length = 157
Score = 125 bits (301), Expect = 6e-29
Identities = 56/96 (58%), Positives = 72/96 (75%)
Frame = +3
Query: 87 MEFVGKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 266
M FVGKKYK+ SENFDE+MK +GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+
Sbjct: 1 MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTS 60
Query: 267 EMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 374
+ FK G EF+E+ DG VKS+ T +GN L Q QK
Sbjct: 61 AISFKLGVEFDEETLDGRNVKSIITLDGNKLTQEQK 96
>BT012432-1|AAS93703.1| 117|Drosophila melanogaster RH70437p
protein.
Length = 117
Score = 89.4 bits (212), Expect = 4e-18
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = +3
Query: 150 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVK 329
+ GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+ + FK G EF+E+ DG VK
Sbjct: 9 SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68
Query: 330 SVCTFEGNTLKQVQK 374
S+ T +GN L Q QK
Sbjct: 69 SIITLDGNKLTQEQK 83
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 397 TYVREFGPEEMKAVMTAKDVTCTRVYK 477
T VREF E+ +T +V C RVYK
Sbjct: 89 TIVREFTDNELITTLTIGNVKCVRVYK 115
>BT003449-1|AAO39452.1| 117|Drosophila melanogaster RH46282p
protein.
Length = 117
Score = 89.4 bits (212), Expect = 4e-18
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = +3
Query: 150 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVK 329
+ GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+ + FK G EF+E+ DG VK
Sbjct: 9 SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68
Query: 330 SVCTFEGNTLKQVQK 374
S+ T +GN L Q QK
Sbjct: 69 SIITLDGNKLTQEQK 83
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 397 TYVREFGPEEMKAVMTAKDVTCTRVYK 477
T VREF E+ +T +V C RVYK
Sbjct: 89 TIVREFTDNELITTLTIGNVKCVRVYK 115
>AE014297-1320|AAF54655.2| 117|Drosophila melanogaster CG6783-PA,
isoform A protein.
Length = 117
Score = 89.4 bits (212), Expect = 4e-18
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = +3
Query: 150 TIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVK 329
+ GVGL+TRK N+++PTVE+ +GD Y L T+STFKT+ + FK G EF+E+ DG VK
Sbjct: 9 SFGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDEETLDGRNVK 68
Query: 330 SVCTFEGNTLKQVQK 374
S+ T +GN L Q QK
Sbjct: 69 SIITLDGNKLTQEQK 83
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 397 TYVREFGPEEMKAVMTAKDVTCTRVYK 477
T VREF E+ +T +V C RVYK
Sbjct: 89 TIVREFTDNELITTLTIGNVKCVRVYK 115
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,892,876
Number of Sequences: 53049
Number of extensions: 543470
Number of successful extensions: 1423
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1423
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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