Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_J01
         (518 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...    93   2e-19
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...    93   2e-19
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...    93   2e-19
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...    93   2e-19
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...    93   2e-19
M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    32   0.54 
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    32   0.54 
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    32   0.54 
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    32   0.54 
Z29361-1|CAA82545.1|  644|Drosophila melanogaster BTD protein.         31   0.71 
AE014298-1363|AAF46518.1|  644|Drosophila melanogaster CG12653-P...    31   0.71 
AY084183-1|AAL89921.1|  315|Drosophila melanogaster RE62247p pro...    31   0.94 
AY069572-1|AAL39717.1|  510|Drosophila melanogaster LD31122p pro...    31   1.2  
AY060416-1|AAL25455.1|  358|Drosophila melanogaster LD37618p pro...    31   1.2  
AE014296-2923|AAF49329.1|  680|Drosophila melanogaster CG6311-PB...    31   1.2  
AE014297-3702|AAF56388.3|  977|Drosophila melanogaster CG11819-P...    29   3.8  
AE014298-1439|AAF46576.2|  313|Drosophila melanogaster CG15307-P...    28   6.6  

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 45/62 (72%), Positives = 52/62 (83%)
 Frame = +2

Query: 107 LAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 286
           LAVLGGK +PA +D+EKILSSVG+E DAE+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 287 GG 292
           GG
Sbjct: 69  GG 70


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 45/62 (72%), Positives = 52/62 (83%)
 Frame = +2

Query: 107 LAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 286
           LAVLGGK +PA +D+EKILSSVG+E DAE+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 287 GG 292
           GG
Sbjct: 69  GG 70


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 45/62 (72%), Positives = 52/62 (83%)
 Frame = +2

Query: 107 LAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 286
           LAVLGGK +PA +D+EKILSSVG+E DAE+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 287 GG 292
           GG
Sbjct: 69  GG 70


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 45/62 (72%), Positives = 51/62 (82%)
 Frame = +2

Query: 107 LAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 286
           LAVLGGK +PA  D+EKILSSVG+E DAE+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 287 GG 292
           GG
Sbjct: 69  GG 70


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 45/62 (72%), Positives = 51/62 (82%)
 Frame = +2

Query: 107 LAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 286
           LAVLGGK +PA  D+EKILSSVG+E DAE+L KVI EL GK ++ LI  GREKLSSMPVG
Sbjct: 9   LAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMPVG 68

Query: 287 GG 292
           GG
Sbjct: 69  GG 70


>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -2

Query: 232 ILAVELSDYFLKLLSVSFDTDGAEDLLNVSGSWRGLATQHSQVNTRPRNA 83
           I  VEL D F K   V  D  G++ + N+  S RGLA      NT  R A
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -2

Query: 232 ILAVELSDYFLKLLSVSFDTDGAEDLLNVSGSWRGLATQHSQVNTRPRNA 83
           I  VEL D F K   V  D  G++ + N+  S RGLA      NT  R A
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -2

Query: 232 ILAVELSDYFLKLLSVSFDTDGAEDLLNVSGSWRGLATQHSQVNTRPRNA 83
           I  VEL D F K   V  D  G++ + N+  S RGLA      NT  R A
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -2

Query: 232 ILAVELSDYFLKLLSVSFDTDGAEDLLNVSGSWRGLATQHSQVNTRPRNA 83
           I  VEL D F K   V  D  G++ + N+  S RGLA      NT  R A
Sbjct: 15  IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKA 64


>Z29361-1|CAA82545.1|  644|Drosophila melanogaster BTD protein.
          Length = 644

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 20/51 (39%), Positives = 27/51 (52%)
 Frame = -3

Query: 261 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTA 109
           S P++ S S S+  S   +F S SAS S PT      T+AAAG +    T+
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTS 198


>AE014298-1363|AAF46518.1|  644|Drosophila melanogaster CG12653-PA
           protein.
          Length = 644

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 20/51 (39%), Positives = 27/51 (52%)
 Frame = -3

Query: 261 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTA 109
           S P++ S S S+  S   +F S SAS S PT      T+AAAG +    T+
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTS 198


>AY084183-1|AAL89921.1|  315|Drosophila melanogaster RE62247p
           protein.
          Length = 315

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = -3

Query: 261 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVV 127
           S P++ S S S+  S   +F S SAS S PT      T+AAAG +
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGAL 192


>AY069572-1|AAL39717.1|  510|Drosophila melanogaster LD31122p
           protein.
          Length = 510

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = -3

Query: 291 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 136
           PPP GI++   + + +     LPL+ + T  + S+S++  T   I STSAAA
Sbjct: 412 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 460


>AY060416-1|AAL25455.1|  358|Drosophila melanogaster LD37618p
           protein.
          Length = 358

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = -3

Query: 291 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 136
           PPP GI++   + + +     LPL+ + T  + S+S++  T   I STSAAA
Sbjct: 260 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 308


>AE014296-2923|AAF49329.1|  680|Drosophila melanogaster CG6311-PB
           protein.
          Length = 680

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = -3

Query: 291 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 136
           PPP GI++   + + +     LPL+ + T  + S+S++  T   I STSAAA
Sbjct: 582 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 630


>AE014297-3702|AAF56388.3|  977|Drosophila melanogaster CG11819-PA
           protein.
          Length = 977

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 149 VEKILSSVGIEADAEKLKKV-ITELNGKDVEQLIAAGREKLSSMPVGG 289
           V KIL   G++  ++ +K++ +T  +GK   +LI      L S+PV G
Sbjct: 247 VNKILDVKGVKGLSKLMKEIAVTASSGKHDNELIGRAAITLKSIPVSG 294


>AE014298-1439|AAF46576.2|  313|Drosophila melanogaster CG15307-PA
           protein.
          Length = 313

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -3

Query: 255 PAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLP 121
           P   S   +L   +V TF++ + S + PT + ++ T +   +V+P
Sbjct: 154 PIPTSTMATLQAQTVATFIAATGSKNRPTTIVVYPTVSPESIVIP 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,723,698
Number of Sequences: 53049
Number of extensions: 249207
Number of successful extensions: 735
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)