Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_J01
         (518 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    62   2e-10
AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    62   2e-10
Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical pr...    32   0.28 
Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical p...    32   0.28 
AF022985-14|AAB69975.2|  218|Caenorhabditis elegans Hypothetical...    28   4.6  
Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical p...    27   8.0  
Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic catio...    27   8.0  

>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 28/61 (45%), Positives = 40/61 (65%)
 Frame = +2

Query: 107 LAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 286
           LA LGG  +P+A DV K+L + G++ D E    V+  L GK + ++IA G+ KLSS+P G
Sbjct: 9   LATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSVPSG 68

Query: 287 G 289
           G
Sbjct: 69  G 69


>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 62.5 bits (145), Expect = 2e-10
 Identities = 40/104 (38%), Positives = 48/104 (46%)
 Frame = +2

Query: 107 LAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGREKLSSMPVG 286
           LAVLGG   P   D++ ILS+VG++ADAE  K V++ L GK VE+LIA G   L S  V 
Sbjct: 9   LAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSAGLVS--VS 66

Query: 287 GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 418
           GG                                   MGFGLFD
Sbjct: 67  GGAAPAAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110


>Z70752-5|CAA94758.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +2

Query: 128 TTPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 247
           +TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>Z70750-16|CAA94750.1|  901|Caenorhabditis elegans Hypothetical
           protein F25B3.1 protein.
          Length = 901

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +2

Query: 128 TTPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 247
           +TPA+A   +I  + GI    EK+  +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484


>AF022985-14|AAB69975.2|  218|Caenorhabditis elegans Hypothetical
           protein T15B7.2 protein.
          Length = 218

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 44  SALHVSCQLGLKKCVTWPRIYLAV-LGGKTTPAAADVEKILSSVGI 178
           SA+ V   LGL   +TWP++Y +V    K    AA +E I + VG+
Sbjct: 19  SAILVKTVLGLANGLTWPQLYESVEFELKIFQTAAILEVIHAIVGL 64


>Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical
           protein F52F12.1a protein.
          Length = 585

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
 Frame = +2

Query: 167 SVGIEADAEKLKKVITELNGK---DVEQLI 247
           SVG  ADA+K  K I ++NGK   DV++L+
Sbjct: 297 SVGKWADAKKQLKKIAKMNGKSNVDVDELV 326


>Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical
           protein F52F12.1b protein.
          Length = 568

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
 Frame = +2

Query: 167 SVGIEADAEKLKKVITELNGK---DVEQLI 247
           SVG  ADA+K  K I ++NGK   DV++L+
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELV 309


>AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic cation
           transporter 1 protein.
          Length = 568

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
 Frame = +2

Query: 167 SVGIEADAEKLKKVITELNGK---DVEQLI 247
           SVG  ADA+K  K I ++NGK   DV++L+
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELV 309


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,419,348
Number of Sequences: 27780
Number of extensions: 122145
Number of successful extensions: 389
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)