Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_I21
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72502-5|CAA96590.1|  193|Caenorhabditis elegans Hypothetical pr...   164   6e-41
U51997-2|AAG24069.1|  332|Caenorhabditis elegans Serpentine rece...    27   8.8  
U41556-10|AAM51520.1|  415|Caenorhabditis elegans Hypothetical p...    27   8.8  

>Z72502-5|CAA96590.1|  193|Caenorhabditis elegans Hypothetical
           protein C08B6.8 protein.
          Length = 193

 Score =  164 bits (398), Expect = 6e-41
 Identities = 74/143 (51%), Positives = 98/143 (68%)
 Frame = +1

Query: 211 IAQRIVWMDLEMTGLDIENDHIMEIACLVTDAQLNVVATGPDIVINLPEVTLNKMNNWCK 390
           I QRI+W+D EMTGLD+E   + EIA +VTD++LN +ATGPDIVI+ P+  L+ M  W +
Sbjct: 11  IEQRIIWIDCEMTGLDVEKQTLCEIALIVTDSELNTIATGPDIVIHQPKEVLDNMEEWPR 70

Query: 391 VQHGETGLTEACLKSDTSLAEAERIILKFVSNHVPEKICPLAGNSXYMDRMXLIKYMPKL 570
               E GL E  + S  S+A+AE  ++ F+  H      P+AGNS YMDR+ + KYMPKL
Sbjct: 71  NTFHENGLMEKIIASKYSMADAENEVIDFLKLHALPGKSPIAGNSIYMDRLFIKKYMPKL 130

Query: 571 XDYLHYRCIDVSTVKELAKRWYP 639
             + HYRCIDVST+K L +RWYP
Sbjct: 131 DKFAHYRCIDVSTIKGLVQRWYP 153


>U51997-2|AAG24069.1|  332|Caenorhabditis elegans Serpentine
           receptor, class h protein19 protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = -2

Query: 344 ITISGPVATTFSCASVTRHAISIMWSFS---MSSPVISRSIHTIL*AMSTLVFFFIIIFG 174
           +T S P+   +   S+ R    + W      +   VI  ++H IL  +   +F + ++FG
Sbjct: 208 LTFSLPITALYINISIPRSTSHVNWKIQKQLLKRLVIQFAVHEILMGIPHCMFIYAVLFG 267


>U41556-10|AAM51520.1|  415|Caenorhabditis elegans Hypothetical
           protein C25B8.7 protein.
          Length = 415

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -2

Query: 200 VFFFIIIFGDTISEIYLHQYYLY*SNYNHDQVY*IALYIN 81
           +F   +  GDTI  ++ H Y L    Y+   V+ I +++N
Sbjct: 91  LFILNMTIGDTILTLFCHPYELVTRRYSGAHVHFITVFLN 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,551,202
Number of Sequences: 27780
Number of extensions: 258518
Number of successful extensions: 599
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)