Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_I18
(499 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0951 - 21769342-21769752 79 1e-15
02_02_0470 - 10700092-10700505 78 3e-15
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 35 0.042
09_01_0103 - 1628763-1628879,1641827-1642921,1645126-1645476,164... 30 1.2
04_03_0540 + 16929782-16929834,16929937-16930032,16930111-169301... 29 1.6
01_06_1350 + 36505926-36505978,36506081-36506176,36506255-365063... 29 1.6
10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,826... 29 2.1
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 29 2.1
08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 29 2.1
10_02_0059 + 4785858-4786988 29 2.7
09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555 29 2.7
09_02_0555 - 10588685-10592038 29 2.7
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 29 2.7
04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379... 29 2.7
03_02_1029 - 13488535-13493037 29 2.7
04_04_1327 + 32677408-32677460,32677563-32677658,32677737-326778... 27 6.3
03_05_0527 + 25220375-25221425,25221513-25222182,25222347-252224... 27 6.3
02_05_0790 - 31768131-31768269,31768343-31768503,31768845-317689... 27 8.4
>10_08_0951 - 21769342-21769752
Length = 136
Score = 79.4 bits (187), Expect = 1e-15
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +3
Query: 198 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLR 377
P KV ++ K K+S++K F+K+VN+ HLMPTRYT+D ++ +A + KK+
Sbjct: 50 PKKVIRKDSAKKTAKKSRVKCFLKLVNFTHLMPTRYTLDVDLKEVAAGPDALATRDKKVA 109
Query: 378 F--NTRVRFEERYKSGKNKWFFQKLRF 452
+ + R E+R+K+GKN+WFF KLRF
Sbjct: 110 ACKSAKARLEDRFKTGKNRWFFTKLRF 136
Score = 51.2 bits (117), Expect = 4e-07
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +1
Query: 49 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSXQAIRACL 174
M K +KPGK V++L GR+AGRKA++V+ ++EGT + CL
Sbjct: 1 MVKFLKPGKAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCL 42
Score = 32.3 bits (70), Expect = 0.22
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 155 KPYGHAFVAGIDRYPRXSAQEDGKE*NPQEVQDKAF 262
+PYGH VAG+ +YP+ ++D + ++ + K F
Sbjct: 36 RPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRVKCF 71
>02_02_0470 - 10700092-10700505
Length = 137
Score = 78.2 bits (184), Expect = 3e-15
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Frame = +3
Query: 198 PGKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKR-KKL 374
P KV ++ K K+S++K F+K+VN+ H+MPTRYT+D F+ ++ A R KK+
Sbjct: 50 PKKVIRKDSAKKTAKKSRVKCFLKLVNFTHIMPTRYTLDVDFKDVASGGPDALATRDKKV 109
Query: 375 RF--NTRVRFEERYKSGKNKWFFQKLRF 452
+ R EER+K+GKN+WFF KLRF
Sbjct: 110 AACKAAKARLEERFKTGKNRWFFTKLRF 137
Score = 52.8 bits (121), Expect = 1e-07
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = +1
Query: 49 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSXQAIRACL 174
M K +KPGK V++L GRYAGRKA++V+ ++EGT + CL
Sbjct: 1 MVKFLKPGKAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCL 42
Score = 32.3 bits (70), Expect = 0.22
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 155 KPYGHAFVAGIDRYPRXSAQEDGKE*NPQEVQDKAF 262
+PYGH VAG+ +YP+ ++D + ++ + K F
Sbjct: 36 RPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRVKCF 71
>02_04_0433 -
22891261-22891509,22892181-22892301,22892405-22892496,
22892692-22892755,22892855-22892920,22893102-22893193,
22893991-22894050,22894181-22894270,22894484-22894613,
22895066-22895157,22895299-22895373,22895663-22895754,
22896496-22896586,22897541-22897574,22897745-22897791,
22899110-22899209,22899300-22899436,22900837-22901015,
22901146-22901188,22901264-22901297,22901839-22901948,
22902043-22902224,22903062-22903168,22903266-22903480
Length = 833
Score = 34.7 bits (76), Expect = 0.042
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 40 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 144
P+K+ + PG V+++L+GRY G++ + +K G
Sbjct: 68 PTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSG 102
>09_01_0103 -
1628763-1628879,1641827-1642921,1645126-1645476,
1645567-1645734
Length = 576
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1
Query: 376 RSFLRLAGSFRSFALNFSKLKSTV*RV 296
RSFL LAG +R F NFSK+ ++ R+
Sbjct: 453 RSFLGLAGYYRRFIENFSKIAKSMTRL 479
>04_03_0540 +
16929782-16929834,16929937-16930032,16930111-16930185,
16930819-16930893,16930987-16931209,16931303-16931546,
16932111-16932568,16932647-16932928,16933032-16933733
Length = 735
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -3
Query: 365 TFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHF 204
TF + F + E + WH++I YNL++ +YL + D V+F
Sbjct: 298 TFKKAFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 350
>01_06_1350 +
36505926-36505978,36506081-36506176,36506255-36506329,
36506964-36507038,36507132-36507348,36507442-36507685,
36508250-36508707,36508786-36509067,36509171-36509872
Length = 733
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -3
Query: 365 TFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHF 204
TF + F + E + WH++I YNL++ +YL + D V+F
Sbjct: 296 TFKKAFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 348
>10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,
8265508-8265704,8275672-8275824
Length = 1034
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 376 RSFLRLAGSFRSFALNFSKLKSTV*RV 296
RSFL LAG +R F NFSK+ + R+
Sbjct: 954 RSFLGLAGYYRRFIENFSKIDKPMTRL 980
>08_02_0167 -
13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 376 RSFLRLAGSFRSFALNFSKL 317
RSFL LAG +R F NFSK+
Sbjct: 505 RSFLGLAGYYRRFIKNFSKI 524
>08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,
3908317-3908337
Length = 1230
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 376 RSFLRLAGSFRSFALNFSKLKSTV*RV 296
RSFL LAG +R F NFSK+ + R+
Sbjct: 985 RSFLGLAGYYRRFIENFSKIAKPMTRL 1011
>10_02_0059 + 4785858-4786988
Length = 376
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 376 RSFLRLAGSFRSFALNFSKL 317
RSFL LAG +R F NFSK+
Sbjct: 224 RSFLGLAGYYRRFIENFSKI 243
>09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555
Length = 383
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 376 RSFLRLAGSFRSFALNFSKL 317
RSFL LAG +R F NFSK+
Sbjct: 281 RSFLGLAGYYRRFIENFSKI 300
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 376 RSFLRLAGSFRSFALNFSKL 317
RSFL LAG +R F NFSK+
Sbjct: 411 RSFLGLAGYYRRFIENFSKI 430
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 376 RSFLRLAGSFRSFALNFSKL 317
RSFL LAG +R F NFSK+
Sbjct: 1071 RSFLGLAGYYRRFIENFSKI 1090
>04_04_0211 -
23636377-23636532,23636624-23636805,23637853-23637959,
23637997-23638280
Length = 242
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 49 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 144
M + PG V+++L+GR+ G++ + +K G
Sbjct: 94 MRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 125
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -1
Query: 376 RSFLRLAGSFRSFALNFSKL 317
RSFL LAG +R F NFSK+
Sbjct: 794 RSFLGLAGYYRRFIENFSKI 813
>04_04_1327 +
32677408-32677460,32677563-32677658,32677737-32677811,
32678446-32678520,32678615-32678837,32678931-32679174,
32679740-32680197,32680276-32680470,32680660-32681361
Length = 706
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -3
Query: 365 TFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHF 204
TF +VF + E + WH++I YNL++ + L + D V+F
Sbjct: 298 TFKKVFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVNLRHIWDIRRKWAFVYF 350
>03_05_0527 +
25220375-25221425,25221513-25222182,25222347-25222440,
25222688-25222870
Length = 665
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 376 RSFLRLAGSFRSFALNFSKL 317
RSFL LAG +R F NFS++
Sbjct: 641 RSFLGLAGYYRRFIENFSRI 660
>02_05_0790 -
31768131-31768269,31768343-31768503,31768845-31768973,
31769770-31769912,31770215-31770332,31771070-31771144,
31771528-31771620,31771750-31771879,31772038-31772126,
31772411-31772506,31772610-31772900
Length = 487
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 87 PKWPVRGSQGYRSQELRRRYLRXSHTGMPSSLVSTGTP 200
P++P+ S +R+ L RR+ R + SS V G P
Sbjct: 19 PRFPLGPSPTFRTSSLPRRHQRLFASAPSSSTVENGEP 56
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,968,847
Number of Sequences: 37544
Number of extensions: 254490
Number of successful extensions: 662
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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