Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_I17
(537 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein pro... 97 5e-20
BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 p... 97 5e-20
BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 p... 97 5e-20
BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 p... 97 5e-20
BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 p... 97 5e-20
AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 p... 97 5e-20
AL163302-1|CAB90481.1| 211|Homo sapiens PRED59 protein. 32 1.5
AL691452-3|CAI16725.1| 2039|Homo sapiens complement component (3... 30 6.0
AL691452-2|CAI16723.1| 2039|Homo sapiens complement component (3... 30 6.0
AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3... 30 6.0
AL137789-3|CAI16043.1| 2039|Homo sapiens complement component (3... 30 6.0
AL137789-2|CAI16042.1| 2039|Homo sapiens complement component (3... 30 6.0
AL137789-1|CAI16044.1| 2039|Homo sapiens complement component (3... 30 6.0
AF264715-1|AAG14442.1| 132|Homo sapiens complement receptor typ... 30 6.0
AY701504-1|AAV65577.1| 116|Homo sapiens CR1 protein domain SCR2... 29 7.9
>M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein
protein.
Length = 145
Score = 96.7 bits (230), Expect = 5e-20
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = +2
Query: 257 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 436
GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD
Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130
Query: 437 LDRI 448
LDRI
Sbjct: 131 LDRI 134
Score = 66.1 bits (154), Expect = 7e-11
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 45 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 191
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD 49
>BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 96.7 bits (230), Expect = 5e-20
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = +2
Query: 257 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 436
GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD
Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130
Query: 437 LDRI 448
LDRI
Sbjct: 131 LDRI 134
Score = 66.1 bits (154), Expect = 7e-11
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 45 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 191
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD 49
>BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19
protein.
Length = 157
Score = 96.7 bits (230), Expect = 5e-20
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = +2
Query: 257 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 436
GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD
Sbjct: 83 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 142
Query: 437 LDRI 448
LDRI
Sbjct: 143 LDRI 146
Score = 64.9 bits (151), Expect = 2e-10
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +3
Query: 54 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 191
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD
Sbjct: 16 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD 61
>BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 96.7 bits (230), Expect = 5e-20
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = +2
Query: 257 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 436
GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD
Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130
Query: 437 LDRI 448
LDRI
Sbjct: 131 LDRI 134
Score = 66.1 bits (154), Expect = 7e-11
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 45 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 191
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD 49
>BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 96.7 bits (230), Expect = 5e-20
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = +2
Query: 257 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 436
GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD
Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130
Query: 437 LDRI 448
LDRI
Sbjct: 131 LDRI 134
Score = 66.1 bits (154), Expect = 7e-11
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 45 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 191
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD 49
>AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 96.7 bits (230), Expect = 5e-20
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = +2
Query: 257 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 436
GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD
Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130
Query: 437 LDRI 448
LDRI
Sbjct: 131 LDRI 134
Score = 66.1 bits (154), Expect = 7e-11
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 45 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYD 191
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD 49
>AL163302-1|CAB90481.1| 211|Homo sapiens PRED59 protein.
Length = 211
Score = 31.9 bits (69), Expect = 1.5
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 222 HPSSYLHSLTXLESRLSPRSLVGANVMELHLHIS-AGHQAVLHARLCNR 365
H S ++SL L LSP + + EL H + GHQ +LH LC+R
Sbjct: 150 HHSFCVYSLEILWKELSPPNFIPLTNDELEFHRTVCGHQKILHG-LCHR 197
>AL691452-3|CAI16725.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 313 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 405
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL691452-2|CAI16723.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 313 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 405
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL691452-1|CAI16724.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 313 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 405
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL137789-3|CAI16043.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 313 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 405
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL137789-2|CAI16042.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 313 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 405
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AL137789-1|CAI16044.1| 2039|Homo sapiens complement component (3b/4b)
receptor 1 (Knops blood group) protein.
Length = 2039
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 313 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 405
FT ++IR C GF +VG +++GRW
Sbjct: 1609 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 1639
>AF264715-1|AAG14442.1| 132|Homo sapiens complement receptor type 1
protein.
Length = 132
Score = 29.9 bits (64), Expect = 6.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 313 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 405
FT ++IR C GF +VG +++GRW
Sbjct: 93 FTLTEIIRFRCQPGFVMVGSHTVQCQTNGRW 123
>AY701504-1|AAV65577.1| 116|Homo sapiens CR1 protein domain SCR25
protein.
Length = 116
Score = 29.5 bits (63), Expect = 7.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 313 FTFLQVIRQYCTQGFAIVGGIEAC*ESSGRW 405
FT +++R C GF +VG +++GRW
Sbjct: 84 FTLTEIVRFRCQPGFVMVGSHTVQCQTNGRW 114
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,503,403
Number of Sequences: 237096
Number of extensions: 1533931
Number of successful extensions: 3238
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3238
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -