Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_I14
(534 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0544 - 9362615-9362674,9362783-9362857,9362934-9363144,936... 86 2e-17
05_04_0333 + 20333243-20333329,20335048-20335110,20335276-203353... 85 3e-17
05_03_0407 + 13582595-13582681,13583067-13583129,13583289-135833... 85 3e-17
07_01_1091 - 10015180-10015236,10015705-10015779,10015874-100161... 79 2e-15
12_02_1229 + 27197464-27197481,27200438-27201583,27201935-272022... 55 4e-08
01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926... 48 6e-06
11_06_0148 + 20631949-20632338,20632838-20633044,20633168-206332... 32 0.33
01_05_0559 + 23281408-23282457,23282580-23282942,23283938-232839... 29 3.1
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 28 4.1
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 28 5.4
07_03_0288 + 16285485-16285721,16285811-16286184,16286499-162868... 27 7.2
>03_02_0544 -
9362615-9362674,9362783-9362857,9362934-9363144,
9363279-9363403,9363492-9363593,9363676-9363738,
9363817-9363897,9364248-9364359,9364454-9364626,
9364722-9364829,9364909-9364992,9365131-9365193,
9365652-9365738
Length = 447
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +2
Query: 86 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASI 223
MDEEYDVIVLGTGLKECI+SG+LSV G KVLH+DRN YYGGES S+
Sbjct: 1 MDEEYDVIVLGTGLKECIISGLLSVDGLKVLHMDRNDYYGGESTSL 46
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 391 SFKSIEGSYVYKGGKISXVPVDXKEALASDLMGMFXKRRFRNFLIYVQ 534
+FK+++GS+VY GKI VP EAL S+LMG+F KRR R F IYVQ
Sbjct: 100 NFKAVDGSFVYNNGKIHKVPATDVEALKSNLMGLFEKRRARKFFIYVQ 147
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +3
Query: 258 NAPAPDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVT 377
N AP E G +++NVD++PKF+MANG LV++LIHT VT
Sbjct: 58 NETAP-EHLGVSKEYNVDMVPKFMMANGALVRVLIHTSVT 96
>05_04_0333 +
20333243-20333329,20335048-20335110,20335276-20335359,
20335720-20335827,20335969-20336141,20337135-20337246,
20337468-20337548,20337635-20337697,20337779-20337880,
20338070-20338194,20338317-20338527,20338625-20338699,
20338990-20339043
Length = 445
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +2
Query: 86 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASI 223
MDEEYDVIVLGTGLKECILSG+LSV G KVLH+DRN YYGG+S S+
Sbjct: 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSL 46
Score = 64.9 bits (151), Expect = 4e-11
Identities = 30/48 (62%), Positives = 35/48 (72%)
Frame = +1
Query: 391 SFKSIEGSYVYKGGKISXVPVDXKEALASDLMGMFXKRRFRNFLIYVQ 534
SFK+++GSYV+ GKI VP EAL S LMG+F KRR RNF IYVQ
Sbjct: 100 SFKAVDGSYVFSKGKIHKVPATDMEALKSPLMGLFEKRRARNFFIYVQ 147
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = +3
Query: 231 LEELFGXXFNAPAPDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVT 377
L +L+ P G RD+NVD++PKF+MANG LV+ LIHT VT
Sbjct: 48 LNQLWKRFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVT 96
>05_03_0407 +
13582595-13582681,13583067-13583129,13583289-13583372,
13583757-13583864,13584018-13584190,13585190-13585301,
13585424-13585504,13585611-13585673,13585764-13585865,
13586063-13586187,13586316-13586526,13586614-13586688,
13586950-13587003
Length = 445
Score = 85.4 bits (202), Expect = 3e-17
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = +2
Query: 86 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASI 223
MDEEYDVIVLGTGLKECILSG+LSV G KVLH+DRN YYGG+S S+
Sbjct: 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSL 46
Score = 64.9 bits (151), Expect = 4e-11
Identities = 30/48 (62%), Positives = 35/48 (72%)
Frame = +1
Query: 391 SFKSIEGSYVYKGGKISXVPVDXKEALASDLMGMFXKRRFRNFLIYVQ 534
SFK+++GSYV+ GKI VP EAL S LMG+F KRR RNF IYVQ
Sbjct: 100 SFKAVDGSYVFSKGKIHKVPATDMEALKSPLMGLFEKRRARNFFIYVQ 147
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +3
Query: 231 LEELFGXXFNAPAPDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVT 377
L +L+ P G +D+NVD++PKF+MANG LV+ LIHT VT
Sbjct: 48 LNQLWKRFRGEDKPPAHLGSSKDYNVDMVPKFMMANGTLVRTLIHTDVT 96
>07_01_1091 -
10015180-10015236,10015705-10015779,10015874-10016149,
10016204-10016332,10017070-10017171,10017626-10017688,
10017776-10017856,10018218-10018314,10019064-10019236,
10019327-10019434,10019706-10019789,10019985-10020047,
10020483-10020569
Length = 464
Score = 79.4 bits (187), Expect = 2e-15
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = +2
Query: 86 MDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASI 223
MD EYDVIVLGTGLKECILSG+LSV KVLH+DRN YYGG+S S+
Sbjct: 1 MDVEYDVIVLGTGLKECILSGLLSVDRLKVLHMDRNDYYGGDSTSL 46
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +3
Query: 231 LEELFGXXFNAPAPDETYGRGRDWNVDLIPKFLMANGLLVKLLIHTGVT 377
L +L+ P G RD+NVD+IPKF+MANG LV++LIHTGVT
Sbjct: 48 LNQLWKRFKGEGTPPAQIGASRDYNVDMIPKFMMANGTLVRVLIHTGVT 96
Score = 56.4 bits (130), Expect = 1e-08
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +1
Query: 391 SFKSIEGSYVYKGGKISXVPVDXKEALASDLMGMFXKRRFRNFLIYVQ 534
SFK+++GSYV+ GKI VP EAL S LMG+F KRR F ++VQ
Sbjct: 100 SFKAVDGSYVFNKGKIHKVPSTDMEALKSPLMGLFEKRRAGKFFLFVQ 147
>12_02_1229 +
27197464-27197481,27200438-27201583,27201935-27202201,
27202849-27202882,27202997-27203100,27203174-27203308,
27203367-27203511,27203864-27203880
Length = 621
Score = 54.8 bits (126), Expect = 4e-08
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 86 MDEEYDVIVLGTGLKECILSGMLSVSGKKVL 178
MDEEYDVIVLGTGL ECILSG+LSV G K +
Sbjct: 449 MDEEYDVIVLGTGLMECILSGLLSVDGLKFI 479
>01_01_1165 -
9267891-9268145,9268395-9268510,9268991-9269127,
9269645-9269808,9269892-9269972,9270783-9270962,
9271489-9271929,9273234-9273344,9274355-9274463,
9274618-9274643,9274823-9274903,9275013-9275211,
9275374-9275449,9275553-9275769,9276117-9276155,
9276684-9276783,9276962-9277084,9277171-9277895
Length = 1059
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 74 YTIIMDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESASI 223
Y I +DV++ GTGL E +L+ + +GK VLH+D N +YG +S+
Sbjct: 16 YPTIDPTSFDVVLCGTGLPESVLAAACAAAGKTVLHVDPNPFYGSLFSSL 65
>11_06_0148 +
20631949-20632338,20632838-20633044,20633168-20633267,
20633478-20633560,20633656-20633712,20633790-20633942,
20634016-20634094,20634279-20634427,20634541-20634675,
20634783-20634896,20635065-20635175,20635338-20635373,
20635675-20635884
Length = 607
Score = 31.9 bits (69), Expect = 0.33
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 95 EYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGES 214
EYD IV+G+G+ + + L+ G +VL +++ GG S
Sbjct: 68 EYDAIVVGSGIGGMVAATQLAAKGARVLVLEKYVIPGGSS 107
>01_05_0559 +
23281408-23282457,23282580-23282942,23283938-23283991,
23284088-23284156
Length = 511
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 101 DVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYG 205
++I++ TGLK CI + ++G VL + N G
Sbjct: 265 EIILMNTGLKSCIPPELGMLTGLAVLDVSHNSLMG 299
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 92 EEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 220
E YD IV+G G C L+ LS+ K +L YG + S
Sbjct: 49 ETYDYIVVGGGTAGCPLAATLSLKYKVLLLERGGSPYGNRNVS 91
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 74 YTIIMDEEYDVIVLGTGLKECILSGMLSVSGKKVLHIDRNKYYGGESAS 220
++ I E YD I++G G C L+ LS K +L YG + S
Sbjct: 42 FSRIQHEAYDYIIVGGGTAGCPLAATLSQKYKVLLLERGGSPYGNRNIS 90
>07_03_0288 +
16285485-16285721,16285811-16286184,16286499-16286892,
16286917-16287806,16291189-16291446,16291518-16291628,
16291697-16291775,16291880-16291972,16292095-16292280
Length = 873
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 406 EGSYVYKGGKISXVPVDXKEALASDLMGMFXKRRFRNFLIY 528
EG V+K K+ V V K + G F R R+ LIY
Sbjct: 217 EGDVVFKDQKLKEVAVKMKNIVMQQQAGTFVPDRDRDELIY 257
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,263,359
Number of Sequences: 37544
Number of extensions: 261098
Number of successful extensions: 573
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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