Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_I09
(575 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes ... 180 3e-44
UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127; Euka... 165 9e-40
UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4; Eukary... 151 9e-36
UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5; Magnol... 146 3e-34
UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1; O... 114 1e-24
UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protei... 113 2e-24
UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia... 111 1e-23
UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of cy... 107 1e-22
UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative; n... 99 4e-20
UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n... 68 9e-20
UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1; Guilla... 94 2e-18
UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7; T... 91 1e-17
UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1; Enceph... 85 9e-16
UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2; Neoptera... 76 7e-13
UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45; root|... 62 9e-09
UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1; Methan... 59 8e-08
UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum... 57 3e-07
UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4; Entamoeba|... 56 5e-07
UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus ... 55 1e-06
UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum... 55 1e-06
UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11; Eurya... 54 2e-06
UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal ... 50 3e-05
UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1; Archae... 50 4e-05
UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum ... 48 1e-04
UniRef50_Q53K43 Cluster: Retrotransposon protein, putative, uncl... 48 2e-04
UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1; Nanoar... 48 2e-04
UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropy... 48 2e-04
UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4; Haloba... 47 3e-04
UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5; Thermo... 46 5e-04
UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured... 45 0.001
UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiel... 43 0.006
UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3; Sulfol... 40 0.032
UniRef50_Q9M3S6 Cluster: 60S L13 ribosomal protein; n=1; Arabido... 40 0.055
UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6; Methan... 40 0.055
UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 38 0.17
UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 38 0.22
UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;... 35 1.2
UniRef50_Q8IL67 Cluster: Metalloendopeptidase, putative; n=2; Pl... 34 2.1
UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12; Bacter... 34 2.8
UniRef50_Q855Z2 Cluster: Gp80; n=1; Mycobacterium phage Barnyard... 33 3.6
UniRef50_A6SZB5 Cluster: Uncharacterized giant conserved protein... 33 4.8
UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32; Bacter... 33 4.8
UniRef50_UPI00015B9850 Cluster: UPI00015B9850 related cluster; n... 33 6.4
UniRef50_Q60TB9 Cluster: Putative uncharacterized protein CBG205... 33 6.4
>UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes
aegypti|Rep: 60S ribosomal protein L13a - Aedes aegypti
(Yellowfever mosquito)
Length = 236
Score = 180 bits (437), Expect = 3e-44
Identities = 76/129 (58%), Positives = 96/129 (74%)
Frame = +2
Query: 185 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 364
NK+K +++LRKRCNVNPARGPFHFRAPS++LWK VRGM+PHKT+RG NAL+RL+ Y+G P
Sbjct: 52 NKIKFLAYLRKRCNVNPARGPFHFRAPSRMLWKAVRGMVPHKTKRGHNALKRLKVYEGIP 111
Query: 365 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVA 544
PFD CL+P R +C VGR++HE+GWKYRDVV LE KRK K+
Sbjct: 112 SPFDRQKRLCVPTAMRQLCLRPDRKFCDVGRVAHEVGWKYRDVVNNLEAKRKIKSRLSYL 171
Query: 545 YEKKLKRIT 571
+ KKLK++T
Sbjct: 172 HSKKLKKLT 180
Score = 77.0 bits (181), Expect = 3e-13
Identities = 35/50 (70%), Positives = 41/50 (82%)
Frame = +1
Query: 31 MTGFSNKAIVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGNFF 180
M G S K I+IDGRGHLLGRLA+VIAK +L G KVVVVRCE + +SG+FF
Sbjct: 1 MPGLSEKPILIDGRGHLLGRLASVIAKQILNGRKVVVVRCEDLQLSGHFF 50
>UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127;
Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila
melanogaster (Fruit fly)
Length = 205
Score = 165 bits (400), Expect = 9e-40
Identities = 71/129 (55%), Positives = 92/129 (71%)
Frame = +2
Query: 185 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 364
NK+K +++LRKRCNVNPARGPFHFRAPS+I +K VRGMIPHKT+RG+ AL RLR +DG P
Sbjct: 52 NKIKFLAYLRKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIP 111
Query: 365 PPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVA 544
P+D L+ R YC VGRLSHE+GW Y+DV++ LE KRK K +
Sbjct: 112 SPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLK 171
Query: 545 YEKKLKRIT 571
+ ++LK++T
Sbjct: 172 HNRELKKLT 180
Score = 82.2 bits (194), Expect = 8e-15
Identities = 34/50 (68%), Positives = 45/50 (90%)
Frame = +1
Query: 31 MTGFSNKAIVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGNFF 180
MTG +N+ +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+
Sbjct: 1 MTGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFY 50
>UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4;
Eukaryota|Rep: 60S ribosomal protein L13a - Cyanophora
paradoxa
Length = 200
Score = 151 bits (367), Expect = 9e-36
Identities = 68/136 (50%), Positives = 94/136 (69%), Gaps = 1/136 (0%)
Frame = +2
Query: 155 KSISLATSLV-NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNA 331
+ I+++ SL NKLK +FL+KR N NP RGPFHFR+P++ILW+T+RGMIPHKT RG A
Sbjct: 38 EEINISGSLFRNKLKFHAFLKKRMNTNPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAA 97
Query: 332 LRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLED 511
L RL+ ++G PPP+D LKPGR +C +GRL+ E+GW++ D+V +LE+
Sbjct: 98 LERLKAFEGVPPPYDKMKRMVIPQALRVLRLKPGRKFCVLGRLATEVGWRHSDLVTRLEE 157
Query: 512 KRKGKAVKRVAYEKKL 559
KRK K+ A +K L
Sbjct: 158 KRKTKSAAFYARKKTL 173
Score = 63.7 bits (148), Expect = 3e-09
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = +1
Query: 49 KAIVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGNFF 180
K +V+D RGHLLGRLAA +AK LL G +VV VR E+INISG+ F
Sbjct: 4 KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLF 47
>UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5;
Magnoliophyta|Rep: 60S ribosomal protein L13a - Capsicum
annuum (Bell pepper)
Length = 220
Score = 146 bits (354), Expect = 3e-34
Identities = 67/135 (49%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
Frame = +2
Query: 155 KSISLATSLVN-KLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNA 331
+ I L+ LV K+K + FLRKR N P+ GP HFRAPSKILW+T+RGMIPHKT+RG A
Sbjct: 44 EEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGAAA 103
Query: 332 LRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLED 511
L RL+ Y+G PPP+D L+ G YC +G+LS E+GW + D +++LED
Sbjct: 104 LARLKVYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGKLSSEVGWNHYDTIKELED 163
Query: 512 KRKGKAVKRVAYEKK 556
KRK +A +V YE++
Sbjct: 164 KRKERA--QVTYERR 176
Score = 61.7 bits (143), Expect = 1e-08
Identities = 27/56 (48%), Positives = 41/56 (73%)
Frame = +1
Query: 22 VVKMTGFSNKAIVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGNFFSEQ 189
+V +G S + IV+D R H+LGRL++++AK LL G +VVVVRCE+I +SG ++
Sbjct: 1 MVSGSGISARRIVVDARHHMLGRLSSILAKELLNGQRVVVVRCEEICLSGGLVRQK 56
>UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
ribosomal protein L13a - Oryza sativa subsp. japonica
(Rice)
Length = 172
Score = 114 bits (275), Expect = 1e-24
Identities = 52/118 (44%), Positives = 70/118 (59%)
Frame = +2
Query: 146 AANKSISLATSLVNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGK 325
A + +S S++ K L R N P+ GP HFR+P+KILW+TVRGMIPHKT+RG+
Sbjct: 16 ARHHMLSRLASIIAKELLNGKRVVRMNTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGE 75
Query: 326 NALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVR 499
AL RL+ Y+ PP+D L+PG YC +G+LS E+GW Y D +R
Sbjct: 76 AALARLKAYEVVTPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKEVGWNYYDTIR 133
Score = 39.9 bits (89), Expect = 0.042
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1
Query: 22 VVKMTGFSNKAIVIDGRGHLLGRLAAVIAKXLLEGNKVV 138
+V +G +V+D R H+L RLA++IAK LL G +VV
Sbjct: 1 MVSGSGVCAPRVVVDARHHMLSRLASIIAKELLNGKRVV 39
>UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protein;
n=16; Alveolata|Rep: Ribosomal protein L13 containing
protein - Tetrahymena thermophila SB210
Length = 270
Score = 113 bits (273), Expect = 2e-24
Identities = 55/138 (39%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Frame = +2
Query: 155 KSISLATSLV-NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNA 331
++I+++ SL N++K FL K N NP RG HFRAPS+I W+ VRGM+PHKT +G A
Sbjct: 110 EAINISGSLFRNRVKFSEFLNKWMNHNPRRGVQHFRAPSRIFWRAVRGMLPHKTPKGAAA 169
Query: 332 LRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLED 511
L RL+ ++G P P+D L+ R C +G LS +GW + ++ KLE+
Sbjct: 170 LERLKIFEGIPTPYDRVKKQVVVDALKVQRLRNSRPVCKLGDLSASVGWGKQTLIEKLEE 229
Query: 512 KRKGKAVKRVAYEKKLKR 565
KR+ +A + ++KK+K+
Sbjct: 230 KRRARA--KTYHDKKVKQ 245
Score = 63.3 bits (147), Expect = 4e-09
Identities = 28/50 (56%), Positives = 38/50 (76%)
Frame = +1
Query: 46 NKAIVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGNFFSEQTQ 195
+K +VID +GHLLGRLA+ +AK LL G ++VVVR E INISG+ F + +
Sbjct: 75 DKLVVIDAKGHLLGRLASYVAKELLSGQRIVVVRTEAINISGSLFRNRVK 124
>UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_8346_8939 - Giardia lamblia ATCC
50803
Length = 197
Score = 111 bits (266), Expect = 1e-23
Identities = 50/110 (45%), Positives = 67/110 (60%)
Frame = +2
Query: 188 KLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPP 367
K + + KR N N RGPFHFRAP++I+ +T+RGMIP+KT RG +A+ RLR YDG PP
Sbjct: 48 KAHYLKKMHKRTNFNHLRGPFHFRAPAEIVRRTIRGMIPYKTVRGSDAMSRLRVYDGIPP 107
Query: 368 PFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKR 517
CL+P R C VGR++HEIGW++ V + E +R
Sbjct: 108 CCARYKRVVCPSAMAYLCLRPERRRCEVGRVAHEIGWQHAADVERYEKRR 157
Score = 56.4 bits (130), Expect = 5e-07
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +1
Query: 55 IVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGNF 177
IVID +GH+LGRL+A++AK LL G++V +VRCE+ ISG F
Sbjct: 4 IVIDCKGHILGRLSAIVAKELLHGHEVALVRCEKAIISGAF 44
>UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit; n=2;
Ostreococcus|Rep: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit -
Ostreococcus lucimarinus CCE9901
Length = 199
Score = 107 bits (258), Expect = 1e-22
Identities = 46/117 (39%), Positives = 68/117 (58%)
Frame = +2
Query: 206 FLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXX 385
+ KR N NP +GP+H+ +PS++ WKTVRGM+PHKT RG A R + Y+G P P+D
Sbjct: 55 YKNKRMNTNPKKGPYHYTSPSRLFWKTVRGMLPHKTVRGAAAFERFKAYEGIPAPYDKVK 114
Query: 386 XXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKK 556
L G +C +G +IGWK+ +V++LE KR+ A + A +K+
Sbjct: 115 RAVVPEALKVLRLGEGHRFCVLGDFCEQIGWKHGAIVKELEAKRQTAASEYWAQKKE 171
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +1
Query: 46 NKAIVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISG 171
+K IVID +GHL GRLA++++K LL+G VVVVR E I +SG
Sbjct: 2 DKVIVIDAKGHLFGRLASIVSKQLLQGQHVVVVRTEGICMSG 43
>UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative;
n=10; Trypanosomatidae|Rep: 60S ribosomal protein L13a,
putative - Leishmania major
Length = 222
Score = 99 bits (238), Expect = 4e-20
Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Frame = +2
Query: 173 TSLVNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTY 352
T + NK+K + +LRKR NP +GPFH RAPS + +TVR M+P T+RG AL L Y
Sbjct: 64 TEIRNKIKYLQYLRKRKLTNPTKGPFHHRAPSDVFVRTVRSMLPRYTKRGMKALNSLVAY 123
Query: 353 DGCPPPFDNXXXXXXX-XXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKA 529
+G PP C + R Y +G + +GWKY DVV LE R KA
Sbjct: 124 EGIPPNVVRTGGRVVIPRAQRHVCYRSERPYTVLGNMCKHVGWKYSDVVANLEKARVEKA 183
Query: 530 VKRVAYEKKLK 562
+ + KL+
Sbjct: 184 SRHHEKQAKLR 194
Score = 56.8 bits (131), Expect = 3e-07
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = +1
Query: 55 IVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISG 171
IVID + H+LGR AAV+AK LL G K+ VVRCEQ+NI+G
Sbjct: 25 IVIDLKDHVLGRAAAVVAKQLLLGKKITVVRCEQLNIAG 63
>UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB39CE UniRef100
entry - Canis familiaris
Length = 172
Score = 68.1 bits (159), Expect(2) = 9e-20
Identities = 27/43 (62%), Positives = 35/43 (81%)
Frame = +2
Query: 185 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKT 313
NKLK ++FL K+ N NP+RGP+ F+APS+I W T RGM+PHKT
Sbjct: 49 NKLKYLAFLCKQMNTNPSRGPYRFQAPSRIFWWTARGMLPHKT 91
Score = 54.8 bits (126), Expect = 1e-06
Identities = 28/44 (63%), Positives = 34/44 (77%)
Frame = +1
Query: 49 KAIVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGNFF 180
+ +V+ GRGHLLG LAA +AK +L G KVVVV E INISGNF+
Sbjct: 5 QVLVLSGRGHLLGCLAATVAKQVL-GCKVVVVHYEGINISGNFY 47
Score = 51.2 bits (117), Expect(2) = 9e-20
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +2
Query: 422 LKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRI 568
LKP R + ++GRL+H++GWKY+ V LE+ RK KA +K+L R+
Sbjct: 98 LKPTRKFAYLGRLAHKVGWKYQAVTATLEENRKEKAKIHYWKKKQLMRL 146
>UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1;
Guillardia theta|Rep: 60s ribosomal protein L13A -
Guillardia theta (Cryptomonas phi)
Length = 194
Score = 94.3 bits (224), Expect = 2e-18
Identities = 50/131 (38%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Frame = +2
Query: 182 VNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGC 361
VNK K S +K+ N NP RGPFHF++PSKIL++T++ MIPHKT RG AL+ L+ ++G
Sbjct: 48 VNKYK--SIFKKKTNTNPRRGPFHFKSPSKILYQTIKRMIPHKTMRGSKALKNLKIFEGL 105
Query: 362 PPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDK--RKGKAVK 535
P F +K R ++G++ +GWK R + + D+ GK V
Sbjct: 106 PRIFSKIKKEKFFEAFRYKVIKNYRKTVNLGKVCEVLGWKNRKFIEQKSDQLAALGKVVL 165
Query: 536 RVAYEKKLKRI 568
+ E K RI
Sbjct: 166 KKKKEIKKFRI 176
Score = 48.0 bits (109), Expect = 2e-04
Identities = 18/41 (43%), Positives = 32/41 (78%)
Frame = +1
Query: 49 KAIVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISG 171
K V+D + HLLGR+A++ AK +L+G+K++++R E +I+G
Sbjct: 2 KIHVLDAKNHLLGRMASICAKKILQGDKIIIIRSELTSITG 42
>UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein L13,
putative - Trichomonas vaginalis G3
Length = 200
Score = 91.5 bits (217), Expect = 1e-17
Identities = 45/110 (40%), Positives = 62/110 (56%)
Frame = +2
Query: 206 FLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXX 385
FL K N NP GPFH RAP +I + VRGMIP+KT RG +A L+ Y+G P + +
Sbjct: 55 FLNKTTNSNPRDGPFHQRAPHEIFARAVRGMIPYKTHRGADAFANLQCYEGIPAKYVSYK 114
Query: 386 XXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVK 535
+ R +GRLS +GWKY +VV +LE++RK ++ K
Sbjct: 115 RLVIPHALRCVSIHTDRPTTKLGRLSTTMGWKYGNVVAQLEEQRKAESAK 164
Score = 59.7 bits (138), Expect = 5e-08
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +1
Query: 55 IVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISG 171
IVID +GH+ GRLAA +AK LL+G KVVVVRCE+I ++G
Sbjct: 5 IVIDAKGHIQGRLAAAVAKQLLKGRKVVVVRCEEIELNG 43
>UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13A
- Encephalitozoon cuniculi
Length = 198
Score = 85.4 bits (202), Expect = 9e-16
Identities = 43/109 (39%), Positives = 56/109 (51%)
Frame = +2
Query: 194 KLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPF 373
K +L KRC VNP RGPFHFR P L K +R MI +K RGK A+ RL TY+G P
Sbjct: 53 KFKQYLNKRCLVNPRRGPFHFREPRMHLAKIIRRMISYKKPRGKAAMSRLATYEGIPREL 112
Query: 374 DNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRK 520
+ + P R Y +G+L GWK+ + + L D+ K
Sbjct: 113 EGQPRYKVTCAFVKYTGNPNR-YVTLGKLLSMFGWKHAEAAKSLTDELK 160
Score = 38.3 bits (85), Expect = 0.13
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +1
Query: 55 IVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGN 174
++ID G + G+LAA +AK LLEG +V VV E+ G+
Sbjct: 7 VIIDATGQVAGKLAAKVAKLLLEGVRVTVVCAEEAVFVGS 46
>UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2;
Neoptera|Rep: Ribomsomal protein L13Ae - Cicindela
campestris (Green tiger beetle)
Length = 78
Score = 75.8 bits (178), Expect = 7e-13
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +2
Query: 419 CLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRIT 571
CLKPGR YCHVGRLSHE+GWKY+ V+ LE KR+ K + +K+KR+T
Sbjct: 4 CLKPGRKYCHVGRLSHEVGWKYQKVIESLEHKRQVKVAIKARKHRKMKRLT 54
>UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45;
root|Rep: 50S ribosomal protein L13P - Pyrococcus
horikoshii
Length = 142
Score = 62.1 bits (144), Expect = 9e-09
Identities = 31/89 (34%), Positives = 47/89 (52%)
Frame = +2
Query: 218 RCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXX 397
R NP RGPF+ + +I+ +T+RGM+P KT+RG+ A RRL+ Y G P F +
Sbjct: 56 RTLTNPRRGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQDKQLETI 115
Query: 398 XXXXXXFCLKPGRNYCHVGRLSHEIGWKY 484
+P Y VG ++ +G K+
Sbjct: 116 VEAHVSRLSRP--KYVTVGEVAKFLGGKF 142
Score = 43.2 bits (97), Expect = 0.005
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +1
Query: 58 VIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGN 174
+I+ G +LGRLA+ +AK LLEG +VV+V E+ I+GN
Sbjct: 3 IINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGN 41
>UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1;
Methanopyrus kandleri|Rep: 50S ribosomal protein L13P -
Methanopyrus kandleri
Length = 159
Score = 58.8 bits (136), Expect = 8e-08
Identities = 35/110 (31%), Positives = 53/110 (48%)
Frame = +2
Query: 152 NKSISLATSLVNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNA 331
N ++ T N +K +L+K +P +GPF+ R P I + VRGM+P KT+RG+ A
Sbjct: 46 NTEKAIITGKKNTIK-EEWLQKIQRGDPKKGPFYPRRPDLIFRRVVRGMLPWKTKRGREA 104
Query: 332 LRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 481
+RLR Y G P + Y +G LS E+G++
Sbjct: 105 FKRLRAYIGTPRWVEEANIEPERVAEADMSRLGHLWYVTLGELSEELGYQ 154
Score = 39.9 bits (89), Expect = 0.042
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +1
Query: 58 VIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISG 171
VID +LGRLA+V+AK +L+G ++ V+ E+ I+G
Sbjct: 17 VIDAENAVLGRLASVVAKRILKGERIAVINTEKAIITG 54
>UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L13 - Thermofilum
pendens (strain Hrk 5)
Length = 154
Score = 56.8 bits (131), Expect = 3e-07
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = +1
Query: 31 MTGFSNKAIVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISG 171
M+G +AIVIDG GH+ GRLA+V+AK LL+G++VVVV E+I I+G
Sbjct: 1 MSG-KEEAIVIDGTGHIAGRLASVVAKRLLKGDRVVVVNAEKIVITG 46
Score = 41.5 bits (93), Expect = 0.014
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 230 NPA-RGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDN 379
NP RGP + + P ++ + VRGM+P + G+++L+RL Y G P + N
Sbjct: 67 NPELRGPKYPKTPDRLFKRMVRGMLPMEKTIGRDSLKRLTVYVGLPDEYRN 117
>UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4;
Entamoeba|Rep: Ribosomal protein L13A - Entamoeba dispar
Length = 87
Score = 56.4 bits (130), Expect = 5e-07
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +1
Query: 43 SNKAIVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISG 171
+NK VID GH+LGR+A+V+AK LL G K+V+VRCE + + G
Sbjct: 8 NNKVTVIDCHGHVLGRVASVVAKHLLLGQKIVLVRCEDLQVCG 50
Score = 34.7 bits (76), Expect = 1.6
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 206 FLRKRCNVNPARGPFHFRAPSKILWK 283
+ RKR N NP RG FH R+P++++ K
Sbjct: 62 YQRKRVNTNPTRGAFHHRSPAEMVRK 87
>UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L13
- Candidatus Nitrosopumilus maritimus SCM1
Length = 154
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 206 FLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPH-KTERGKNALRRLRTYDGCPPPFDNX 382
FL +NP GP H+R P I+ K +R M+P+ + GK +++RLR Y G P +
Sbjct: 64 FLEINSIINPKHGPVHYRRPDTIITKMIRQMLPYDRKPSGKESIKRLRAYIGSPKELKSL 123
Query: 383 XXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGW 478
K NY +G L IGW
Sbjct: 124 EKIQFEKAKIK---KSPSNYTTMGELCRVIGW 152
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +1
Query: 43 SNKAIVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISG 171
+++ IV+D H+ GRL++ +AK L +G++V +V CE+I SG
Sbjct: 10 TDRPIVVDATNHIAGRLSSNVAKLLKQGHRVSIVNCEKIMYSG 52
>UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L13 - Cenarchaeum
symbiosum
Length = 139
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/91 (31%), Positives = 41/91 (45%)
Frame = +2
Query: 206 FLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXX 385
FL+ ++P GP+H R P I+ + +RGM+P K GK A RLR Y G P +
Sbjct: 50 FLKIASIIHPEHGPYHPRRPDTIMTRMIRGMLPRKKPSGKAAHSRLRAYIGSPGHLKSFE 109
Query: 386 XXXXXXXXXXFCLKPGRNYCHVGRLSHEIGW 478
+P NY + L +GW
Sbjct: 110 KRKLKGAEIT---RPTANYTTMADLGETVGW 137
Score = 48.4 bits (110), Expect = 1e-04
Identities = 19/38 (50%), Positives = 29/38 (76%)
Frame = +1
Query: 58 VIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISG 171
++D H+ GRLA+ +AK LLEGN+V ++ CE++ ISG
Sbjct: 1 MVDATDHIAGRLASNVAKMLLEGNRVSIINCEKVMISG 38
>UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L13P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 140
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/81 (30%), Positives = 43/81 (53%)
Frame = +2
Query: 242 GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFC 421
GP+ + P +IL +T+RGM+P+K RG++A+ RL+ Y G P++
Sbjct: 62 GPYFPKRPDRILKRTIRGMLPYKRARGRDAMSRLKVYVGV--PYELKGAETTTIADADMR 119
Query: 422 LKPGRNYCHVGRLSHEIGWKY 484
L Y +G +S ++G K+
Sbjct: 120 LLSSNKYVELGEVSQKMGSKF 140
Score = 39.9 bits (89), Expect = 0.042
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +1
Query: 58 VIDGRGHLLGRLAAVIAKXLLEGN-KVVVVRCEQINISGN 174
VID +G +LGRLA+ +AK LL G+ KV ++ E+ ISG+
Sbjct: 3 VIDAKGLILGRLASSVAKQLLSGDEKVYIINAEKAIISGS 42
>UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal
protein L13a; n=2; Bos taurus|Rep: PREDICTED: similar to
ribosomal protein L13a - Bos taurus
Length = 112
Score = 50.4 bits (115), Expect = 3e-05
Identities = 28/106 (26%), Positives = 45/106 (42%)
Frame = +2
Query: 200 MSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDN 379
+ + + NP+ GPF F P I TV+ ++P+K + + L L+ +D +
Sbjct: 6 LDLFHRPLDTNPSNGPFQFWVPKHIFRHTVQDLLPYKIKHDQETLEHLKVFDKTKQMIIS 65
Query: 380 XXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKR 517
CL G L++E GWKY+ V LE K+
Sbjct: 66 VQICVSEATSRFACL---------GYLTYESGWKYQVVTNTLEKKK 102
>UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L13P -
Archaeoglobus fulgidus
Length = 156
Score = 50.0 bits (114), Expect = 4e-05
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = +2
Query: 239 RGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 364
+GP+ R P +I +TVRGM+P K+ RG++A RRLR + G P
Sbjct: 75 KGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVP 116
Score = 46.4 bits (105), Expect = 5e-04
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +1
Query: 58 VIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGN 174
VID GH+LGRL++ IAK LL G ++VVV E+ I+G+
Sbjct: 18 VIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGD 56
>UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L13 -
Halorubrum lacusprofundi ATCC 49239
Length = 149
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +2
Query: 185 NKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 364
N+ M R + GP++ + P +I + +RGM+P+KTE G+ AL +R Y G P
Sbjct: 49 NEEATMETYHTRAELGSDSGPYYPKRPDRIFKRAIRGMLPYKTEDGREALSNVRVYVGNP 108
Score = 38.3 bits (85), Expect = 0.13
Identities = 16/40 (40%), Positives = 28/40 (70%)
Frame = +1
Query: 55 IVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGN 174
+V+D R +LGR+++ +A+ +L+G V VV E+ I+GN
Sbjct: 10 VVVDARDCILGRVSSKVAQRVLDGETVAVVNAERAVITGN 49
>UniRef50_Q53K43 Cluster: Retrotransposon protein, putative,
unclassified; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 512
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +2
Query: 317 RGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHE 469
RG+ AL RL+ Y+G PPP+D L+PG YC +G+LS E
Sbjct: 9 RGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKE 59
>UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L13P -
Nanoarchaeum equitans
Length = 162
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/85 (32%), Positives = 46/85 (54%)
Frame = +2
Query: 110 RXFSKGTKLLWFAANKSISLATSLVNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTV 289
R +G ++ A K+I T N +K +L+K + +GPF+ + P IL + +
Sbjct: 25 RNLKRGYRVKIVNAEKAI--ITGDPNMVK-KEWLQKVKRGDYYKGPFYPKRPDNILKRVI 81
Query: 290 RGMIPHKTERGKNALRRLRTYDGCP 364
RGM+P KT RG+ L+ ++ Y G P
Sbjct: 82 RGMLPRKTARGRELLKNVKVYIGVP 106
>UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L13P - Aeropyrum
pernix
Length = 155
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = +1
Query: 31 MTGFSNKAIVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGN 174
+ G + IV+DG G ++GRLA+V+AK LL G +V VV E+I +SG+
Sbjct: 3 LAGGEAREIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGD 50
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 257 RAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGR 436
R P ++ VRGM+P RG+ AL RLR Y G P D +
Sbjct: 79 RTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVP---DELKGREFVRFPEADASRLSS 135
Query: 437 NYCHVGRLSHEIGWK 481
+Y +G ++ ++GWK
Sbjct: 136 HYIELGAVARQLGWK 150
>UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 145
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +2
Query: 215 KRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 364
KR ++ G F+ + P I +T+RGM+PHK +RG+ A +R Y G P
Sbjct: 59 KRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNP 108
Score = 35.1 bits (77), Expect = 1.2
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +1
Query: 55 IVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISG 171
+++D R ++GR+A+ +A+ L+G V VV E+ I+G
Sbjct: 10 VIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITG 48
>UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L13P -
Pyrobaculum aerophilum
Length = 187
Score = 46.4 bits (105), Expect = 5e-04
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 218 RCNVNPAR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 364
R + NP + GP R P ++ + VRGM+P K+E G++AL+RLR Y P
Sbjct: 76 RTHYNPEKAGPKVPRRPDRVFKRIVRGMLPKKSETGRSALKRLRVYMSIP 125
Score = 40.7 bits (91), Expect = 0.024
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Frame = +1
Query: 55 IVIDGRGHLLGRLAAVIAKXLLE--GNKVVVVRCEQINISGN 174
+++D GH+ GRLA IAK LLE ++VVV E++ I+G+
Sbjct: 19 VIVDAEGHVAGRLATYIAKALLERPNLRIVVVNAEKLVITGD 60
>UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L13P -
uncultured organism HF70_19B12
Length = 161
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 152 NKSISLATSLVNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPH-KTERGKN 328
N +++ T +++ L + RK +P +GPF R P IL +TVRGM+P+ K G+
Sbjct: 43 NAEMAIVTGPKDRI-LADYDRKYKLNHPRKGPFFPRMPDMILKRTVRGMLPYQKKSSGRQ 101
Query: 329 ALRRLRTYDGCP 364
A++ LR G P
Sbjct: 102 AVKDLRVMIGTP 113
>UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L13A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 181
Score = 42.7 bits (96), Expect = 0.006
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +1
Query: 49 KAIVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGNF 177
K IVIDGR L+GRLA+ I L +G + V+RC+ + SG +
Sbjct: 3 KTIVIDGRNQLIGRLASNIVILLKKGYTLKVIRCKDLVFSGRY 45
Score = 37.9 bits (84), Expect = 0.17
Identities = 23/117 (19%), Positives = 45/117 (38%)
Frame = +2
Query: 218 RCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXX 397
+ NP +GP+ F PS +L K V+GM+ + + + ++ P +
Sbjct: 59 KTRTNPNKGPYFFSNPSSLLKKIVKGMLNKLNKSHTLLFKSVECFNDTPNRYIYNYKLFL 118
Query: 398 XXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRI 568
+ LKP + + + + GW+ R + K ++ KKL +
Sbjct: 119 KNSHKNYKLKPDSKFTKLYEILPKFGWQDRSSCTESNSKNGIRSTIYSFNSKKLNNL 175
>UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3;
Sulfolobaceae|Rep: 50S ribosomal protein L13P -
Sulfolobus solfataricus
Length = 149
Score = 40.3 bits (90), Expect = 0.032
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +1
Query: 34 TGFSNKAIVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISG 171
T + ++I+ G +LGR+A+ + + L EG KV++V E+ ISG
Sbjct: 3 TQVQEQVVIINAEGQILGRMASNVVRLLKEGKKVIIVNGEKAVISG 48
Score = 38.7 bits (86), Expect = 0.097
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Frame = +2
Query: 110 RXFSKGTKLLWFAANKSISLATS--LVNKLKLMSFLRKRCNVNPAR-GPFHFRAPSKILW 280
R +G K++ K++ ++ KL+ L + NP R G R+P I+
Sbjct: 28 RLLKEGKKVIIVNGEKAVISGEKNRVIESYKLL--LTVKTLFNPYRNGIRRPRSPINIVK 85
Query: 281 KTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRL 460
+T+RGM+P K+ +G+ L+ ++ Y G P F+ LK G+ Y V +
Sbjct: 86 RTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFEGRQFIKFPDSDVS-RLK-GK-YVTVEVV 141
Query: 461 SHEIGW 478
S E+GW
Sbjct: 142 SKELGW 147
>UniRef50_Q9M3S6 Cluster: 60S L13 ribosomal protein; n=1;
Arabidopsis thaliana|Rep: 60S L13 ribosomal protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 61
Score = 39.5 bits (88), Expect = 0.055
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +2
Query: 461 SHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLK 562
+HE+GW+Y+ +V KLE+KRK VK AY K K
Sbjct: 1 AHEVGWQYQGIVEKLEEKRK---VKGTAYYTKKK 31
>UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6;
Methanococcales|Rep: 50S ribosomal protein L13P -
Methanococcus maripaludis
Length = 137
Score = 39.5 bits (88), Expect = 0.055
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 209 LRKRCNV-NPAR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 364
LR R ++ NP + GP + R P I+ + +RGM+P+K RG A ++++ G P
Sbjct: 52 LRTRKSISNPKKMGPKYPRRPDDIVRRVIRGMLPYKKPRGVEAFKKIKIEVGVP 105
Score = 35.5 bits (78), Expect = 0.90
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 55 IVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGN 174
+V++ ++GRLA+ +AK L G ++ VV E+ ++GN
Sbjct: 2 VVVNAENAVVGRLASYVAKLALSGEEITVVNAEKAIMTGN 41
>UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L13P -
Picrophilus torridus
Length = 138
Score = 37.9 bits (84), Expect = 0.17
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 55 IVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISG 171
I ID H+ GRL++ +AK LL G + +V ++ I+G
Sbjct: 2 IYIDASNHIYGRLSSYVAKKLLNGESITIVNASKVVITG 40
Score = 35.5 bits (78), Expect = 0.90
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 239 RGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDN 379
+GP++ + +IL +++ M+P K G AL+R Y P +N
Sbjct: 60 KGPYYPKTADRILKRSIGDMLPKKKTHGMEALKRCMVYANVPKSLEN 106
>UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4;
Thermoprotei|Rep: 50S ribosomal protein L13P -
Sulfolobus acidocaldarius
Length = 148
Score = 37.5 bits (83), Expect = 0.22
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 55 IVIDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISG 171
+++D +LGR++ IAK L G KV VV E+ ISG
Sbjct: 8 VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISG 46
Score = 34.7 bits (76), Expect = 1.6
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 230 NPAR-GPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCP 364
NP R G R P I+ +TVRGM+P K + GK R L+ Y G P
Sbjct: 66 NPYRQGIRRPRNPINIVKRTVRGMLP-KNKLGKQIYRNLKAYIGIP 110
>UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;
n=1; Pisum sativum|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 255
Score = 35.1 bits (77), Expect = 1.2
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +1
Query: 79 LLGRLAAVIAKXLLEGNKVVVVRCEQINISG 171
+LGRLA+++AK L + +VRCE+I ISG
Sbjct: 1 MLGRLASIVAKELSMVRRSFLVRCEEICISG 31
>UniRef50_Q8IL67 Cluster: Metalloendopeptidase, putative; n=2;
Plasmodium falciparum|Rep: Metalloendopeptidase, putative
- Plasmodium falciparum (isolate 3D7)
Length = 1523
Score = 34.3 bits (75), Expect = 2.1
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -3
Query: 237 AGFTLHLLRRNDISLSLFTKEVARDIDLFAANHNNF 130
AGF L++ N L L KEV I+LF N+NNF
Sbjct: 1391 AGFFTILVQTNPRDLELIKKEVLSCIELFTTNYNNF 1426
>UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12;
Bacteria|Rep: 50S ribosomal protein L13 - Synechococcus
sp. (strain CC9902)
Length = 150
Score = 33.9 bits (74), Expect = 2.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 257 RAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 370
R P +I+ K ++GM+PH G+ R+L+ Y G P
Sbjct: 96 RIPERIVEKAIKGMLPHNA-LGRQMYRKLKVYKGTEHP 132
>UniRef50_Q855Z2 Cluster: Gp80; n=1; Mycobacterium phage
Barnyard|Rep: Gp80 - Mycobacterium phage Barnyard
Length = 1111
Score = 33.5 bits (73), Expect = 3.6
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Frame = +2
Query: 425 KPGRNYCHVG-----RLSHEI--GWKYRDVVRKLEDKRKGKAVKRVAYEKKL 559
KP R C G +LS EI GWKYR R +RK + VKR+ YE K+
Sbjct: 296 KPLRFVCDKGLTAKQQLSREIAKGWKYRVAQRPDMARRKAEYVKRLQYEFKI 347
>UniRef50_A6SZB5 Cluster: Uncharacterized giant conserved protein;
n=1; Janthinobacterium sp. Marseille|Rep:
Uncharacterized giant conserved protein -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 4130
Score = 33.1 bits (72), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 61 IDGRGHLLGRLAAVIAKXLLEGNKVVVVRCEQINISGNFFSEQT 192
+ +GH +G AA L GN+V+ + IN+SG F+ QT
Sbjct: 586 LSNQGHSIGEWAAQGGTLTLGGNEVITQQGSAINLSGGSFNVQT 629
>UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32;
Bacteria|Rep: 50S ribosomal protein L13 -
Prochlorococcus marinus (strain MIT 9313)
Length = 150
Score = 33.1 bits (72), Expect = 4.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 257 RAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 370
R P +I+ K ++GM+PH G+ R+L+ Y G P
Sbjct: 96 RLPERIVEKAIKGMLPHNA-LGRQLFRKLKVYRGPEHP 132
>UniRef50_UPI00015B9850 Cluster: UPI00015B9850 related cluster; n=1;
unknown|Rep: UPI00015B9850 UniRef100 entry - unknown
Length = 377
Score = 32.7 bits (71), Expect = 6.4
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 7 WLFRFVVKMTGFSNK--AIVIDGRGHLLGRLA-AVIAKXLLEGNKVVVVRCEQIN 162
W R V+ + N+ AIV+DG GHLLG ++ I + LL G + + +N
Sbjct: 31 WTLREVITLIDRGNQKLAIVVDGSGHLLGTISDGDIRRALLRGETLEALAVTVMN 85
>UniRef50_Q60TB9 Cluster: Putative uncharacterized protein CBG20539;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG20539 - Caenorhabditis
briggsae
Length = 668
Score = 32.7 bits (71), Expect = 6.4
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Frame = -1
Query: 512 CLQAYEQHHGISIQFHGT-VCLHDSNYGQVSDRRHVEQQALQHVDGYQREEGTHHM--YV 342
CL Y HHG Q HGT HD + H E GTHH Y
Sbjct: 450 CLAYYGTHHGTHDQSHGTHGGYHDPAHHGTHHATHYESHGTHGGYHDPAHHGTHHATHYE 509
Query: 341 AS*EHSCHALFCVGSY 294
+ H H+L G++
Sbjct: 510 SHGTHGHHSLAYYGTH 525
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,712,793
Number of Sequences: 1657284
Number of extensions: 11298109
Number of successful extensions: 28133
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 27315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28117
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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