Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_I08
         (419 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17L04 Cluster: Putative uncharacterized protein; n=1; ...    56   3e-07
UniRef50_Q7PSG3 Cluster: ENSANGP00000019800; n=1; Anopheles gamb...    54   1e-06
UniRef50_UPI0000D57151 Cluster: PREDICTED: hypothetical protein;...    52   4e-06
UniRef50_UPI0000DB773B Cluster: PREDICTED: hypothetical protein;...    40   0.027
UniRef50_UPI000065F3B8 Cluster: Homolog of Homo sapiens "Splice ...    32   4.1  
UniRef50_Q5RH37 Cluster: Novel protein similar to vertebrate lam...    32   4.1  
UniRef50_Q9ZNZ7 Cluster: Ferredoxin-dependent glutamate synthase...    32   4.1  
UniRef50_Q5N7H9 Cluster: PHD finger protein-like; n=2; Oryza sat...    32   5.4  
UniRef50_Q25431 Cluster: ECM 18; n=1; Lytechinus variegatus|Rep:...    31   7.2  
UniRef50_Q8C687 Cluster: 10 days neonate skin cDNA, RIKEN full-l...    31   9.5  
UniRef50_A6LEX9 Cluster: Putative outer membrane protein, probab...    31   9.5  
UniRef50_A2E1Y2 Cluster: Putative uncharacterized protein; n=1; ...    31   9.5  

>UniRef50_Q17L04 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 108

 Score = 56.0 bits (129), Expect = 3e-07
 Identities = 21/59 (35%), Positives = 32/59 (54%)
 Frame = +3

Query: 165 CAPTTPCAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEDDTEVHAYIHRCTRIDPDS 341
           C   T C W VY P ++ I+  M N  C C   T C  T+DD  + A+++RC + D ++
Sbjct: 49  CTDNTACGWAVYKPFTRSIENYMRNT-CSCPEPTKCIRTDDDLSISAFVYRCRKTDSET 106


>UniRef50_Q7PSG3 Cluster: ENSANGP00000019800; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000019800 - Anopheles gambiae
           str. PEST
          Length = 115

 Score = 54.0 bits (124), Expect = 1e-06
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +3

Query: 165 CAPTTPCAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEDDTEVHAYIHRC 320
           C   TPC W VY+P ++ I + M N  C C     C  T+DD  + AY++RC
Sbjct: 52  CEGNTPCGWAVYTPATRAIDSFMKNT-CDCEKLKQCVRTDDDVSISAYVYRC 102


>UniRef50_UPI0000D57151 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 106

 Score = 52.4 bits (120), Expect = 4e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)
 Frame = +3

Query: 162 ICAPTTPCAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEDDTEVHAYIHRCTRID 332
           IC   TPC W VY+ +++ I   M N+ C C+ +  C   +DD  + AY++RC +ID
Sbjct: 45  ICQGRTPCGWAVYNKMTRFIDYFMRNK-CECNKEKRCLRDDDDISITAYVYRC-KID 99


>UniRef50_UPI0000DB773B Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 134

 Score = 39.5 bits (88), Expect = 0.027
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 177 TPCAWTVYSPVSKMIQTNMTNRFCICSADT-TCAITEDDTEVHAYIHRC 320
           TPC W  Y+PV++     M N  C C  +T  C  T ++  + AY++ C
Sbjct: 66  TPCGWNTYNPVTRRSTIFMPNT-CKCPDETYKCVRTGENVSMSAYVYHC 113


>UniRef50_UPI000065F3B8 Cluster: Homolog of Homo sapiens "Splice
            Isoform 4 of Kinesin-like motor protein C20orf23; n=2;
            Coelomata|Rep: Homolog of Homo sapiens "Splice Isoform 4
            of Kinesin-like motor protein C20orf23 - Takifugu
            rubripes
          Length = 3070

 Score = 32.3 bits (70), Expect = 4.1
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = -1

Query: 242  SVCHVSLYHLRNWRINSPGAR---SSRGANYGLISRCLCHFCGSRRFCCFGSLCRRLSGI 72
            +VC +S  H+ N  + S   R    S    Y L     CH    R FCC  +  R+ +G+
Sbjct: 2962 TVCQLSKIHMFNQSVRSVWTRPLDDSTQLVYILTDPSSCHLSQPRDFCCLSTQSRQ-AGM 3020

Query: 71   CYL 63
            C L
Sbjct: 3021 CVL 3023


>UniRef50_Q5RH37 Cluster: Novel protein similar to vertebrate laminin,
            beta family protein; n=1; Danio rerio|Rep: Novel protein
            similar to vertebrate laminin, beta family protein -
            Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 1713

 Score = 32.3 bits (70), Expect = 4.1
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -1

Query: 146  RCLCHFCGSRRFCCFGSLCR--RLSGICYLEP-VLGNIGSRESTNRQN 12
            RC+C+  GS R  C   LC   R+SG C   P V G +  R + N  N
Sbjct: 996  RCMCNLVGSSRQSCVDGLCECDRISGQCPCLPGVEGQLCDRCAPNTWN 1043


>UniRef50_Q9ZNZ7 Cluster: Ferredoxin-dependent glutamate synthase 1,
           chloroplast precursor; n=63; cellular organisms|Rep:
           Ferredoxin-dependent glutamate synthase 1, chloroplast
           precursor - Arabidopsis thaliana (Mouse-ear cress)
          Length = 1648

 Score = 32.3 bits (70), Expect = 4.1
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -1

Query: 371 AISCQHTKLLRVGINASASVNVRVHFCIVFGNSACGVG*ANAESVC-HVSLYHLRNWRIN 195
           A+   H  L++ G+  SAS+      C    + AC VG   A +VC +++L   R WR++
Sbjct: 757 AVGAVHQHLIQNGLRMSASIVADTAQCFSTHHFACLVG-YGASAVCPYLALETCRQWRLS 815

Query: 194 S 192
           +
Sbjct: 816 N 816


>UniRef50_Q5N7H9 Cluster: PHD finger protein-like; n=2; Oryza
           sativa|Rep: PHD finger protein-like - Oryza sativa
           subsp. japonica (Rice)
          Length = 175

 Score = 31.9 bits (69), Expect = 5.4
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -1

Query: 248 AESVCHVSLYHLRNWRINSPGARSSRGANYGLISRCLCHFC 126
           A S+C    YH+R  R     +   +G  Y     CLC  C
Sbjct: 37  AHSLCPYKFYHIRCLRYEQIASSEQQGNEYWYCPSCLCRVC 77


>UniRef50_Q25431 Cluster: ECM 18; n=1; Lytechinus variegatus|Rep:
           ECM 18 - Lytechinus variegatus (Sea urchin)
          Length = 505

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 20/52 (38%), Positives = 23/52 (44%)
 Frame = +3

Query: 183 CAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEDDTEVHAYIHRCTRIDPD 338
           C    Y  V +  + N T  FC C ADT     + DTEVH     C R  PD
Sbjct: 291 CTQDGYYAVEQCYEGNGT--FCWC-ADTETGAVKPDTEVHGARADCERFLPD 339


>UniRef50_Q8C687 Cluster: 10 days neonate skin cDNA, RIKEN
           full-length enriched library, clone:4732458P17
           product:zinc finger protein 101, full insert sequence;
           n=14; Murinae|Rep: 10 days neonate skin cDNA, RIKEN
           full-length enriched library, clone:4732458P17
           product:zinc finger protein 101, full insert sequence -
           Mus musculus (Mouse)
          Length = 612

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 11  DSGGLCFRGCQCSQGQAPSNRYRSTDD 91
           +  G C RGCQC Q QA S  Y   +D
Sbjct: 70  EKDGECERGCQCEQTQAQSPEYIVNED 96


>UniRef50_A6LEX9 Cluster: Putative outer membrane protein, probably
           involved in nutrient binding; n=1; Parabacteroides
           distasonis ATCC 8503|Rep: Putative outer membrane
           protein, probably involved in nutrient binding -
           Parabacteroides distasonis (strain ATCC 8503 / DSM 20701
           / NCTC11152)
          Length = 1038

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 19/60 (31%), Positives = 33/60 (55%)
 Frame = -1

Query: 395 MNKLFYSGAISCQHTKLLRVGINASASVNVRVHFCIVFGNSACGVG*ANAESVCHVSLYH 216
           +N+L     ++ Q TK LR+G+N   +   RV+  +   NS  GVG A    + +VS+++
Sbjct: 348 LNRLSLKADLTQQATKWLRIGLNGQMT-RTRVNGVMNDENSLGGVGFAGTRMLPNVSVFN 406


>UniRef50_A2E1Y2 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1785

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 28   LSRLPMFPRTGSK*QIPLNRRHKLPKQQKRREPQ 129
            ++ LP+ PR  +K Q P   +  LPK+Q+   PQ
Sbjct: 947  INELPVSPRNRNKIQSPTKSKEVLPKKQENTRPQ 980


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,797,573
Number of Sequences: 1657284
Number of extensions: 5921976
Number of successful extensions: 14420
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14413
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)