Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_I08
         (419 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical pr...    29   1.4  
U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical pr...    27   5.5  
U88173-9|AAK21384.3|  320|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z81527-12|CAB04277.2|  487|Caenorhabditis elegans Hypothetical p...    26   9.5  
U23450-5|AAK31466.3|  706|Caenorhabditis elegans Hypothetical pr...    26   9.5  
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr...    26   9.5  

>Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical
           protein B0395.2 protein.
          Length = 467

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +3

Query: 144 SGNKPIICAPTTPCAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEDDTEVHAYI 311
           + N P + A  T  A   Y P+  + ++++    C CS   TC  T    +VH++I
Sbjct: 134 ASNLPFVTAYVTYLAAFFYFPLKFLYESDLK---CACSFIITCETTRIAMKVHSFI 186


>U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical
           protein D1044.7 protein.
          Length = 400

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +3

Query: 150 NKPIICAPTTPCA-WTVYSPVSKM--IQTNMTNRFCICSADTTCAITEDDTEVHA 305
           N+P+ C P  PC+ ++V +    +    +N  N  C  S +T C  T    +V A
Sbjct: 33  NQPLTCTPQDPCSCFSVSARYGAICHYSSNYNNYLCCHSQNTQCG-TNSSPQVSA 86


>U88173-9|AAK21384.3|  320|Caenorhabditis elegans Hypothetical
           protein F46F11.7 protein.
          Length = 320

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 402 CINEQAIL*RCNKLSAYKTTTSRD-QCECICE 310
           C+N Q IL RC  +S  + +  RD +CE + E
Sbjct: 102 CVNGQCILNRCQGVSCDEGSMCRDGKCEKVLE 133


>Z81527-12|CAB04277.2|  487|Caenorhabditis elegans Hypothetical
           protein F35E12.10 protein.
          Length = 487

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -1

Query: 377 SGAISCQHTKLLRVGINASASVNVRVHFCIVFGNSACGVG 258
           +G++S  +   ++VG+ AS++  VRV F     NSA  +G
Sbjct: 436 TGSVS-SNGNYMKVGLTASSNTEVRVAFEFKKYNSATSIG 474


>U23450-5|AAK31466.3|  706|Caenorhabditis elegans Hypothetical
           protein C30B5.1 protein.
          Length = 706

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 241 DSAFAQPTPHALLPKTIQKCTRTFTDAL 324
           D +  +  P   LPKTI + TRT +D+L
Sbjct: 397 DMSETEERPRPKLPKTIYQNTRTHSDSL 424


>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
            ZK783.1 protein.
          Length = 2585

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 128  CGSRRFCCFGSLCRRLSGICYLEP 57
            C S   C   +LC R +G+C  EP
Sbjct: 1414 CTSSDECGLDALCERRTGVCRCEP 1437


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,533,036
Number of Sequences: 27780
Number of extensions: 153873
Number of successful extensions: 448
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)