Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_I06
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 180 9e-46
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 180 1e-45
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 156 2e-38
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 146 2e-35
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 78 7e-15
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 56 3e-08
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_17136| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_19372| Best HMM Match : zf-C2HC_plant (HMM E-Value=9.3) 31 1.1
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 3.3
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 3.3
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.4
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_54576| Best HMM Match : Nucleoplasmin (HMM E-Value=2.6) 28 5.8
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 7.6
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 7.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 180 bits (438), Expect = 9e-46
Identities = 82/108 (75%), Positives = 94/108 (87%)
Frame = +2
Query: 206 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 385
YVAF+DTERLIGDAAKNQVAMNP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +
Sbjct: 41 YVAFSDTERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGER 100
Query: 386 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 529
PKI+V +KGE K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVPA
Sbjct: 101 PKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPA 148
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = +3
Query: 525 PRYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 650
P YF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK
Sbjct: 147 PAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKK 188
Score = 74.1 bits (174), Expect = 9e-14
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 85 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 192
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQG +
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNR 36
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 180 bits (437), Expect = 1e-45
Identities = 83/108 (76%), Positives = 96/108 (88%)
Frame = +2
Query: 206 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 385
YV FTDTERL+GDAAKNQVA+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD K
Sbjct: 41 YVGFTDTERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNK 100
Query: 386 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 529
PKI+V YKGE KTF EE+SSMVL KMKETAEAYLG+ V +AVITVPA
Sbjct: 101 PKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPA 148
Score = 82.6 bits (195), Expect = 3e-16
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +3
Query: 525 PRYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 647
P YFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK
Sbjct: 147 PAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDK 187
Score = 70.9 bits (166), Expect = 8e-13
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +1
Query: 85 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 192
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQG +
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNR 36
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 156 bits (378), Expect = 2e-38
Identities = 84/133 (63%), Positives = 94/133 (70%), Gaps = 25/133 (18%)
Frame = +2
Query: 206 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGK 385
YVAFTD ERL+GDAAKNQVAMNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+
Sbjct: 41 YVAFTDEERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGR 100
Query: 386 PKIKVAYKGEDKTFFPEEV-------------------------SSMVLTKMKETAEAYL 490
PK+KV YKGE KTFF EEV SSMVL KMKETAEAYL
Sbjct: 101 PKVKVEYKGETKTFFAEEVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYL 160
Query: 491 GKTVQNAVITVPA 529
G V +AV+TVPA
Sbjct: 161 GCKVTDAVVTVPA 173
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/42 (95%), Positives = 40/42 (95%)
Frame = +3
Query: 525 PRYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 650
P YFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK
Sbjct: 240 PAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKK 281
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +1
Query: 85 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 192
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQG +
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNR 36
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +2
Query: 437 EVSSMVLTKMKETAEAYLGKTVQNAVITVPA 529
++SSMVL KMKETAEAYLG V +AV+TVPA
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPA 241
Score = 36.3 bits (80), Expect = 0.022
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 525 PRYFNDSQRQATKDAG 572
P YFNDSQRQATKDAG
Sbjct: 172 PAYFNDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 146 bits (353), Expect = 2e-35
Identities = 71/109 (65%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
Frame = +2
Query: 206 YVAFTDT-ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGG 382
YVAFT+ ERLIGD AKNQ+ NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV
Sbjct: 738 YVAFTEEGERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNK 797
Query: 383 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 529
KP ++V K E KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVPA
Sbjct: 798 KPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPA 846
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = +3
Query: 525 PRYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 650
P YFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK
Sbjct: 845 PAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK 886
Score = 58.0 bits (134), Expect = 6e-09
Identities = 24/30 (80%), Positives = 29/30 (96%)
Frame = +1
Query: 103 VGIDLGTTYSCVGVFQHGKVEIIANDQGQQ 192
+GIDLGTTYSCVGVF++G+VEIIANDQG +
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNR 733
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 77.8 bits (183), Expect = 7e-15
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Frame = +2
Query: 209 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGK 385
VAFTD L+G+ A +Q +NP NTI+DAKR IG+ F + K + F V +D G
Sbjct: 71 VAFTDKGVLVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGN 130
Query: 386 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 529
V KG PEE+ V+ K++ AE L TV AV++VPA
Sbjct: 131 AGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPA 178
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +3
Query: 525 PRYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 650
P F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK
Sbjct: 177 PAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK 218
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Frame = +1
Query: 91 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIAND 180
K +GIDLGTTYSCVG +Q G+++I +++
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDE 61
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +2
Query: 269 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 445
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 446 SMVLTKMKETAEAYLGKTVQNAVITVPA 529
+M+ T++K TAE L V + VI+VP+
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPS 205
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +3
Query: 525 PRYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK 650
P Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+
Sbjct: 204 PSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQ 245
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 55.6 bits (128), Expect = 3e-08
Identities = 36/65 (55%), Positives = 40/65 (61%), Gaps = 24/65 (36%)
Frame = +3
Query: 525 PRYFNDSQRQATKDAGTISGLN------------------------VLRIINEPTAAAIA 632
P +FND+QRQATKDAGTI+GL+ VLRIINEPTAAAIA
Sbjct: 46 PAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIA 105
Query: 633 YGLDK 647
YGLDK
Sbjct: 106 YGLDK 110
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +2
Query: 392 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 529
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPA 47
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 525 PRYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 641
P +FN ++R+A A + GLNVL+I+N TA A+ YGL
Sbjct: 113 PPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGL 151
Score = 34.3 bits (75), Expect = 0.088
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 386 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 526
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_17136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 974
Score = 31.5 bits (68), Expect = 0.62
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 439 SQFHGAYENEGNCRSLSWQNCAECSYHGSRVTSMTLKDKPQKM 567
S HG Y +GN + N A C + ++ TL++ P+K+
Sbjct: 405 SMLHGKYVKDGNLEEVPKGNAAACRDNEDPISRATLRNPPRKV 447
>SB_19372| Best HMM Match : zf-C2HC_plant (HMM E-Value=9.3)
Length = 156
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 407 KGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPALLQ*LSKTSHKRC--RYHL 580
KG D S+ +++ K LGK Q +I P LL + K S + C R H
Sbjct: 48 KGRDVLRTAIRCLSLYISRKKHCITNRLGKAKQEKIIMNPPLLANIHKQSTQLCPKRLHD 107
Query: 581 WLERSPN 601
L SPN
Sbjct: 108 VLRHSPN 114
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 290 RILCCWGSSPPGSWRH 243
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 290 RILCCWGSSPPGSWRH 243
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 31 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 117
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -1
Query: 480 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 301
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 300 RLASNIVL 277
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_54576| Best HMM Match : Nucleoplasmin (HMM E-Value=2.6)
Length = 281
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 507 MQLSRFPRYFNDSQRQATKDAGTISGLNVLRI 602
+ + RFPRY N+ ++ +G +SG++ I
Sbjct: 194 LSIGRFPRYLNEITCESASGSGPVSGVSSCHI 225
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +1
Query: 217 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALA 357
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 354 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 208
QCF+S C + S + + R+ L TW + + M S +AT
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,249,239
Number of Sequences: 59808
Number of extensions: 426214
Number of successful extensions: 1149
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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