Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_I05
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 168 3e-42
Z92796-4|CAB63231.1| 516|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81077-4|CAB03071.3| 618|Caenorhabditis elegans Hypothetical pr... 24 5.7
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical... 28 6.7
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical... 28 6.7
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ... 28 6.7
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical... 28 6.7
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical... 28 6.7
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ... 28 6.7
AF099913-8|ABB51194.1| 301|Caenorhabditis elegans Hypothetical ... 28 6.7
U50199-4|AAA91264.2| 142|Caenorhabditis elegans Abnormal cell l... 27 8.8
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 168 bits (408), Expect = 3e-42
Identities = 76/102 (74%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
Frame = +2
Query: 113 CTXIP--RSXIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGK 286
C +P + IFDLG KRA VD FP CVH++S+E E LSSEALEA RIC NKY+VKNCGK
Sbjct: 23 CRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAARICANKYMVKNCGK 82
Query: 287 DQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQG 412
D FH+R+R HPFHV RINKMLSCAGADRLQTGMRGA+GKPQG
Sbjct: 83 DGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQG 124
Score = 135 bits (326), Expect = 3e-32
Identities = 85/212 (40%), Positives = 118/212 (55%), Gaps = 7/212 (3%)
Frame = +3
Query: 39 MGRRPARCYRYCKNKPYPKSRFCRGVP*SQDPVSSIWVRRERPLTTFHCACTWCPTNMNS 218
MGRRPARCYRY KNKPYPKSRFCRGVP ++ + + +R + TF C M++
Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRAN-VDTFPA----CVHMMSN 55
Query: 219 *AQRLWRQDVSAA-ISTS*RTAERISS------ISA*DFTLSTLSASIKCYHALELIGSR 377
+ L + + AA I + + + F ++ ++ + C A L
Sbjct: 56 EREHLSSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGM 115
Query: 378 LGCVVRLASLRXTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWG 557
G + L VARV IG + S+R + IEA RRAKFKFPGRQ I S+KWG
Sbjct: 116 RGAYGKPQGL---VARVDIGDILFSMRIKEGNVKHAIEAFRRAKFKFPGRQIIVSSRKWG 172
Query: 558 FTKYERDEFEKLREEGRLANDGCIVQYRPEHG 653
FTK++R+++E++R EGRL +DG VQ + EHG
Sbjct: 173 FTKWDREDYERMRAEGRLRSDGVGVQLQREHG 204
>Z92796-4|CAB63231.1| 516|Caenorhabditis elegans Hypothetical
protein H25K10.5 protein.
Length = 516
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -1
Query: 210 YSSDTKCT--HSGKSSTVALFLPKSKIXDLGIXVHPDRTSISD 88
Y D KCT HS +S F PK+ GI V +T +S+
Sbjct: 51 YDCDLKCTFNHSEMTSETIKFFPKNCTNICGILVFNSKTDLSE 93
>Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical
protein C09G5.2 protein.
Length = 476
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 405 GLPNAPRIPVWSLSAPA 355
G PN+P +P+W LS P+
Sbjct: 232 GFPNSPLLPIWLLSYPS 248
>Z81077-4|CAB03071.3| 618|Caenorhabditis elegans Hypothetical
protein F36A2.4 protein.
Length = 618
Score = 24.2 bits (50), Expect(2) = 5.7
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 442 PSCPCALVTGGRHRSSRLCAVPSSSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLMT 621
P C +V+ + A P S PD+ + R ++ V LR +M+
Sbjct: 391 PPSDCQVVSTSAYSVRLAWAPPFSPDPDLTYNIRYRLKHNEDAKVRELRGIKGNTVEIMS 450
Query: 622 AALCS 636
CS
Sbjct: 451 VDSCS 455
Score = 22.2 bits (45), Expect(2) = 5.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 268 RKELRKGSVPYPHETSPFPRYP 333
+KE R+GS P+E F R P
Sbjct: 367 KKEKRRGSHVLPNEKFMFARLP 388
>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 469 LSLERTDMMGCPMRTRATVXLRLAKRTTHPSLEPISSSA**HFIDADNVERVKSHADME 293
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 469 LSLERTDMMGCPMRTRATVXLRLAKRTTHPSLEPISSSA**HFIDADNVERVKSHADME 293
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 469 LSLERTDMMGCPMRTRATVXLRLAKRTTHPSLEPISSSA**HFIDADNVERVKSHADME 293
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 469 LSLERTDMMGCPMRTRATVXLRLAKRTTHPSLEPISSSA**HFIDADNVERVKSHADME 293
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 469 LSLERTDMMGCPMRTRATVXLRLAKRTTHPSLEPISSSA**HFIDADNVERVKSHADME 293
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 469 LSLERTDMMGCPMRTRATVXLRLAKRTTHPSLEPISSSA**HFIDADNVERVKSHADME 293
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AF099913-8|ABB51194.1| 301|Caenorhabditis elegans Hypothetical
protein C29F9.4 protein.
Length = 301
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 558 FTKYERDEFEKLREEGRLANDGCIVQYR 641
F K +RDEFE++R + LA + I Y+
Sbjct: 136 FFKSQRDEFERIRYDPELAEEHFIEAYK 163
>U50199-4|AAA91264.2| 142|Caenorhabditis elegans Abnormal cell
lineage protein 32 protein.
Length = 142
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 427 FALDSPSCPCALVTGGRHRSSRLCAVPSSSSPDVKR 534
F+LDSP+ P +L GG + C + SP + R
Sbjct: 36 FSLDSPNYPDSLSNGGGKDDKKKCRRYKTPSPQLLR 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,451,545
Number of Sequences: 27780
Number of extensions: 363487
Number of successful extensions: 1022
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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