Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_I01
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U35451-1|AAB81548.1| 185|Homo sapiens heterochromatin protein p... 182 1e-45
CR456766-1|CAG33047.1| 185|Homo sapiens CBX1 protein. 182 1e-45
BC021302-1|AAH21302.1| 185|Homo sapiens chromobox homolog 1 (HP... 182 1e-45
BC002609-1|AAH02609.1| 185|Homo sapiens CBX1 protein protein. 182 1e-45
BC000954-1|AAH00954.1| 183|Homo sapiens chromobox homolog 3 (HP... 177 4e-44
AF136630-1|AAF62370.1| 183|Homo sapiens heterochromatin-like pr... 176 5e-44
CR457418-1|CAG33699.1| 191|Homo sapiens CBX5 protein. 175 1e-43
U26312-1|AAB48101.1| 173|Homo sapiens HP1Hs-gamma protein. 174 2e-43
AB030905-1|BAA83340.1| 173|Homo sapiens Heterochromatin protein... 174 2e-43
U26311-1|AAC50553.1| 190|Homo sapiens HP1Hs-alpha protein. 172 1e-42
S62077-1|AAB26994.1| 191|Homo sapiens HP1Hs alpha protein. 172 1e-42
L07515-1|AAA72327.1| 191|Homo sapiens protein ( Human heterochr... 172 1e-42
BC006821-1|AAH06821.1| 191|Homo sapiens chromobox homolog 5 (HP... 172 1e-42
AF106801-1|AAD21972.1| 153|Homo sapiens heterochromatin-specifi... 151 2e-36
BC014380-1|AAH14380.1| 73|Homo sapiens Unknown (protein for IM... 111 3e-24
BC119760-1|AAI19761.1| 211|Homo sapiens chromobox homolog 2 (Pc... 54 4e-07
BC119759-1|AAI19760.1| 211|Homo sapiens chromobox homolog 2 (Pc... 54 4e-07
BC019289-1|AAH19289.1| 389|Homo sapiens chromobox homolog 8 (Pc... 54 4e-07
BC009376-1|AAH09376.1| 389|Homo sapiens chromobox homolog 8 (Pc... 54 4e-07
BC008937-1|AAH08937.1| 389|Homo sapiens chromobox homolog 8 (Pc... 54 4e-07
BC004252-1|AAH04252.1| 211|Homo sapiens chromobox homolog 2 (Pc... 54 4e-07
AK074560-1|BAC11061.1| 389|Homo sapiens protein ( Homo sapiens ... 54 4e-07
AF266479-1|AAF76328.2| 389|Homo sapiens rectachrome 1 protein. 54 4e-07
AF174482-1|AAG09180.1| 389|Homo sapiens polycomb 3 protein. 54 4e-07
BC003542-1|AAH03542.2| 860|Homo sapiens M-phase phosphoprotein,... 54 6e-07
AL359457-4|CAI16671.1| 860|Homo sapiens M-phase phosphoprotein,... 54 6e-07
AL354808-3|CAI41002.1| 860|Homo sapiens M-phase phosphoprotein,... 54 6e-07
BC014967-1|AAH14967.1| 290|Homo sapiens CBX4 protein protein. 53 8e-07
AY390430-1|AAQ97596.1| 290|Homo sapiens NS5ATP1-binding protein... 53 8e-07
AF013956-1|AAB80718.1| 558|Homo sapiens Polycomb 2 homolog prot... 53 8e-07
BC064900-1|AAH64900.1| 412|Homo sapiens chromobox homolog 6 pro... 52 2e-06
BC012111-1|AAH12111.1| 412|Homo sapiens chromobox homolog 6 pro... 52 2e-06
AL008583-3|CAA15431.1| 412|Homo sapiens chromobox homolog 6 pro... 52 2e-06
BC108725-1|AAI08726.1| 544|Homo sapiens chromodomain protein, Y... 52 2e-06
BC029360-1|AAH29360.1| 230|Homo sapiens SUV39H2 protein protein. 52 2e-06
AL360083-12|CAI40028.1| 410|Homo sapiens suppressor of variegat... 52 2e-06
AL360083-11|CAI40029.1| 230|Homo sapiens suppressor of variegat... 52 2e-06
AL359643-1|CAH73737.1| 598|Homo sapiens chromodomain protein, Y... 52 2e-06
AL356747-2|CAC36888.2| 598|Homo sapiens chromodomain protein, Y... 52 2e-06
AL022725-1|CAI20892.1| 598|Homo sapiens chromodomain protein, Y... 52 2e-06
AF081259-1|AAD22735.1| 598|Homo sapiens testis-specific chromod... 52 2e-06
AF081258-1|AAD22734.1| 598|Homo sapiens testis-specific chromod... 52 2e-06
BC132955-1|AAI32956.1| 554|Homo sapiens chromodomain protein, Y... 50 7e-06
BC132929-1|AAI32930.1| 554|Homo sapiens chromodomain protein, Y... 50 7e-06
BC130428-1|AAI30429.1| 541|Homo sapiens chromodomain protein, Y... 50 7e-06
BC130426-1|AAI30427.1| 541|Homo sapiens chromodomain protein, Y... 50 7e-06
BC069087-1|AAH69087.1| 541|Homo sapiens chromodomain protein, Y... 50 7e-06
AF080598-1|AAD22733.1| 541|Homo sapiens testis-specific chromod... 50 7e-06
AF080597-1|AAD22732.1| 540|Homo sapiens testis-specific chromod... 50 7e-06
AF000981-1|AAC52116.1| 554|Homo sapiens testis-specific ChromoD... 50 7e-06
BC051773-1|AAH51773.1| 251|Homo sapiens chromobox homolog 7 pro... 49 1e-05
AL031846-3|CAB36555.1| 251|Homo sapiens chromobox homolog 7 pro... 49 1e-05
CR457372-1|CAG33653.1| 350|Homo sapiens SUV39H2 protein. 48 2e-05
BC007754-1|AAH07754.1| 350|Homo sapiens suppressor of variegati... 48 2e-05
AL360083-15|CAI40032.1| 350|Homo sapiens suppressor of variegat... 48 2e-05
AL360083-14|CAI40031.1| 152|Homo sapiens suppressor of variegat... 48 2e-05
AK027067-1|BAB15645.1| 350|Homo sapiens protein ( Homo sapiens ... 48 2e-05
DQ064603-1|AAY68391.1| 158|Homo sapiens chromobox-like 7 protein. 48 4e-05
BC100806-1|AAI00807.1| 506|Homo sapiens chromodomain protein, Y... 47 7e-05
BC100805-1|AAI00806.1| 506|Homo sapiens chromodomain protein, Y... 47 7e-05
BC100804-1|AAI00805.1| 506|Homo sapiens chromodomain protein, Y... 47 7e-05
BC100803-1|AAI00804.1| 506|Homo sapiens chromodomain protein, Y... 47 7e-05
BC069440-1|AAH69440.1| 506|Homo sapiens chromodomain protein, Y... 47 7e-05
AY273798-1|AAP83842.1| 506|Homo sapiens chromodomain Y-like pro... 47 7e-05
AK096185-1|BAC04720.1| 506|Homo sapiens protein ( Homo sapiens ... 47 7e-05
CR541746-1|CAG46546.1| 412|Homo sapiens SUV39H1 protein. 44 4e-04
BC006238-1|AAH06238.1| 412|Homo sapiens suppressor of variegati... 44 4e-04
AK223071-1|BAD96791.1| 412|Homo sapiens suppressor of variegati... 44 4e-04
AF019968-1|AAB92224.1| 412|Homo sapiens Su(var)3-9 homolog prot... 44 4e-04
BC117134-1|AAI17135.1| 1709|Homo sapiens chromodomain helicase D... 37 0.072
AF006513-1|AAB87381.1| 1709|Homo sapiens CHD1 protein. 37 0.072
BT007050-1|AAP35699.1| 501|Homo sapiens chromodomain helicase D... 35 0.29
BC020810-1|AAH20810.1| 501|Homo sapiens chromodomain helicase D... 35 0.29
BC007347-1|AAH07347.1| 501|Homo sapiens chromodomain helicase D... 35 0.29
AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein. 35 0.29
BC018088-1|AAH18088.1| 29|Homo sapiens LOC645158 protein protein. 32 1.5
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 30 8.2
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 30 8.2
>U35451-1|AAB81548.1| 185|Homo sapiens heterochromatin protein p25
protein.
Length = 185
Score = 182 bits (442), Expect = 1e-45
Identities = 88/171 (51%), Positives = 107/171 (62%), Gaps = 1/171 (0%)
Frame = +3
Query: 105 QKPKRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXX 284
++ + ++VEKVLDRR+ G +EY LKWKG+SDEDNTWEPE+NLDCPDLI
Sbjct: 15 EEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTA 74
Query: 285 XXXXXXXXXXXXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGEL 464
+ F RGLEPE+IIGATDSSGEL
Sbjct: 75 HETDKSEGGKRKADSDSEDKG--EESKPKKKKEESEKPRGFARGLEPERIIGATDSSGEL 132
Query: 465 MFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERLTWHT-PALDEGNNED 614
MFLMKW+ +DEADLVPAK+ANV+CPQVVI FYEERLTWH+ P+ D+ +D
Sbjct: 133 MFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHSYPSEDDDKKDD 183
Score = 37.5 bits (83), Expect = 0.041
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 81 PTRKKKTNQKPK---RNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDL 251
P +KK+ ++KP+ R E+++ +G L + +KWK + D E N+ CP +
Sbjct: 100 PKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQV 159
Query: 252 I 254
+
Sbjct: 160 V 160
>CR456766-1|CAG33047.1| 185|Homo sapiens CBX1 protein.
Length = 185
Score = 182 bits (442), Expect = 1e-45
Identities = 88/171 (51%), Positives = 107/171 (62%), Gaps = 1/171 (0%)
Frame = +3
Query: 105 QKPKRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXX 284
++ + ++VEKVLDRR+ G +EY LKWKG+SDEDNTWEPE+NLDCPDLI
Sbjct: 15 EEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTA 74
Query: 285 XXXXXXXXXXXXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGEL 464
+ F RGLEPE+IIGATDSSGEL
Sbjct: 75 HETDKSEGGKRKADSDSEDKG--EESKPKKKKEESEKPRGFARGLEPERIIGATDSSGEL 132
Query: 465 MFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERLTWHT-PALDEGNNED 614
MFLMKW+ +DEADLVPAK+ANV+CPQVVI FYEERLTWH+ P+ D+ +D
Sbjct: 133 MFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHSYPSEDDDKKDD 183
Score = 37.5 bits (83), Expect = 0.041
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 81 PTRKKKTNQKPK---RNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDL 251
P +KK+ ++KP+ R E+++ +G L + +KWK + D E N+ CP +
Sbjct: 100 PKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQV 159
Query: 252 I 254
+
Sbjct: 160 V 160
>BC021302-1|AAH21302.1| 185|Homo sapiens chromobox homolog 1 (HP1
beta homolog Drosophila ) protein.
Length = 185
Score = 182 bits (442), Expect = 1e-45
Identities = 88/171 (51%), Positives = 107/171 (62%), Gaps = 1/171 (0%)
Frame = +3
Query: 105 QKPKRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXX 284
++ + ++VEKVLDRR+ G +EY LKWKG+SDEDNTWEPE+NLDCPDLI
Sbjct: 15 EEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTA 74
Query: 285 XXXXXXXXXXXXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGEL 464
+ F RGLEPE+IIGATDSSGEL
Sbjct: 75 HETDKSEGGKRKADSDSEDKG--EESKPKKKKEESEKPRGFARGLEPERIIGATDSSGEL 132
Query: 465 MFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERLTWHT-PALDEGNNED 614
MFLMKW+ +DEADLVPAK+ANV+CPQVVI FYEERLTWH+ P+ D+ +D
Sbjct: 133 MFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHSYPSEDDDKKDD 183
Score = 37.5 bits (83), Expect = 0.041
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 81 PTRKKKTNQKPK---RNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDL 251
P +KK+ ++KP+ R E+++ +G L + +KWK + D E N+ CP +
Sbjct: 100 PKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQV 159
Query: 252 I 254
+
Sbjct: 160 V 160
>BC002609-1|AAH02609.1| 185|Homo sapiens CBX1 protein protein.
Length = 185
Score = 182 bits (442), Expect = 1e-45
Identities = 88/171 (51%), Positives = 107/171 (62%), Gaps = 1/171 (0%)
Frame = +3
Query: 105 QKPKRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXX 284
++ + ++VEKVLDRR+ G +EY LKWKG+SDEDNTWEPE+NLDCPDLI
Sbjct: 15 EEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTA 74
Query: 285 XXXXXXXXXXXXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGEL 464
+ F RGLEPE+IIGATDSSGEL
Sbjct: 75 HETDKSEGGKRKADSDSEDKG--EESKPKKKKEESEKPRGFARGLEPERIIGATDSSGEL 132
Query: 465 MFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERLTWHT-PALDEGNNED 614
MFLMKW+ +DEADLVPAK+ANV+CPQVVI FYEERLTWH+ P+ D+ +D
Sbjct: 133 MFLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHSYPSEDDDKKDD 183
Score = 37.5 bits (83), Expect = 0.041
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 81 PTRKKKTNQKPK---RNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDL 251
P +KK+ ++KP+ R E+++ +G L + +KWK + D E N+ CP +
Sbjct: 100 PKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVKCPQV 159
Query: 252 I 254
+
Sbjct: 160 V 160
>BC000954-1|AAH00954.1| 183|Homo sapiens chromobox homolog 3 (HP1
gamma homolog, Drosophila) protein.
Length = 183
Score = 177 bits (430), Expect = 4e-44
Identities = 85/171 (49%), Positives = 105/171 (61%)
Frame = +3
Query: 87 RKKKTNQKPKRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXX 266
+ KK + F+VEKVLDRR+ NG +EY+LKWKG++D DNTWEPE+NLDCP+LI+
Sbjct: 18 KSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFL 77
Query: 267 XXXXXXXXXXXXXXXXXXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGAT 446
D F RGL+PE+IIGAT
Sbjct: 78 NSQKAGKEKDGTKRKSLSDSES-------DDSKSKKKRDAADKPRGFARGLDPERIIGAT 130
Query: 447 DSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERLTWHTPALDE 599
DSSGELMFLMKW+ +DEADLV AK+AN++CPQ+VI FYEERLTWH+ DE
Sbjct: 131 DSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWHSCPEDE 181
>AF136630-1|AAF62370.1| 183|Homo sapiens heterochromatin-like
protein 1 protein.
Length = 183
Score = 176 bits (429), Expect = 5e-44
Identities = 85/171 (49%), Positives = 105/171 (61%)
Frame = +3
Query: 87 RKKKTNQKPKRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXX 266
+ KK + F+VEKVLDRR+ NG +EY+LKWKG++D DNTWEPE+NLDCP+LI+
Sbjct: 18 KSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFL 77
Query: 267 XXXXXXXXXXXXXXXXXXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGAT 446
D F RGL+PE+IIGAT
Sbjct: 78 NSQKAGKEKDGTKRKSLSDSES-------DDSKSKKKRDAVDKPRGFARGLDPERIIGAT 130
Query: 447 DSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERLTWHTPALDE 599
DSSGELMFLMKW+ +DEADLV AK+AN++CPQ+VI FYEERLTWH+ DE
Sbjct: 131 DSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWHSCPEDE 181
>CR457418-1|CAG33699.1| 191|Homo sapiens CBX5 protein.
Length = 191
Score = 175 bits (425), Expect = 1e-43
Identities = 85/174 (48%), Positives = 103/174 (59%), Gaps = 3/174 (1%)
Frame = +3
Query: 99 TNQKPKRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXX 278
++ + + ++VEKVLDRR+ G +EY LKWKG+S+E NTWEPE NLDCP+LI
Sbjct: 12 SSSEDEEEYVVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYK 71
Query: 279 XXXXXXXXX---XXXXXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATD 449
D+ F+RGLEPEKIIGATD
Sbjct: 72 KMKEGENNKPREKSESNKRKSNFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATD 131
Query: 450 SSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERLTWHTPALDEGNNE 611
S G+LMFLMKW+GTDEADLV AK+ANV+CPQ+VI FYEERLTWH D N E
Sbjct: 132 SCGDLMFLMKWKGTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKE 185
>U26312-1|AAB48101.1| 173|Homo sapiens HP1Hs-gamma protein.
Length = 173
Score = 174 bits (424), Expect = 2e-43
Identities = 84/171 (49%), Positives = 104/171 (60%)
Frame = +3
Query: 87 RKKKTNQKPKRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXX 266
+ KK + F+VEKVLDRR+ NG +EY+LKWKG++D DNTWEPE+NLDCP+LI+
Sbjct: 8 KSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFL 67
Query: 267 XXXXXXXXXXXXXXXXXXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGAT 446
D F RGL+PE+IIGA
Sbjct: 68 NSQKAGKEKDGTKRKSLSDSES-------DDSKSKKKRDAADKPRGFARGLDPERIIGAI 120
Query: 447 DSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERLTWHTPALDE 599
DSSGELMFLMKW+ +DEADLV AK+AN++CPQ+VI FYEERLTWH+ DE
Sbjct: 121 DSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWHSCPEDE 171
>AB030905-1|BAA83340.1| 173|Homo sapiens Heterochromatin protein 1
gamma protein.
Length = 173
Score = 174 bits (424), Expect = 2e-43
Identities = 84/171 (49%), Positives = 104/171 (60%)
Frame = +3
Query: 87 RKKKTNQKPKRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXX 266
+ KK + F+VEKVLDRR+ NG +EY+LKWKG++D DNTWEPE+NLDCP+LI+
Sbjct: 8 KSKKVEEAEPEEFVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFL 67
Query: 267 XXXXXXXXXXXXXXXXXXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGAT 446
D F RGL+PE+IIGA
Sbjct: 68 NSQKAGKEKDGTKRKSLSDSES-------DDSKSKKKRDAADKPRGFARGLDPERIIGAI 120
Query: 447 DSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERLTWHTPALDE 599
DSSGELMFLMKW+ +DEADLV AK+AN++CPQ+VI FYEERLTWH+ DE
Sbjct: 121 DSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWHSCPEDE 171
>U26311-1|AAC50553.1| 190|Homo sapiens HP1Hs-alpha protein.
Length = 190
Score = 172 bits (418), Expect = 1e-42
Identities = 84/174 (48%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Frame = +3
Query: 99 TNQKPKRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXX 278
++ + + ++VEKVLDRR+ G +EY LKWKG+S+E NTWEPE NLDCP+LI
Sbjct: 11 SSSEDEEEYVVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYK 70
Query: 279 XXXXXXXXX---XXXXXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATD 449
D+ F+RGLEPEKIIGATD
Sbjct: 71 KMKEGENNKPREKSESNKRKSNFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATD 130
Query: 450 SSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERLTWHTPALDEGNNE 611
S G+LMFLMKW+ TDEADLV AK+ANV+CPQ+VI FYEERLTWH D N E
Sbjct: 131 SCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKE 184
>S62077-1|AAB26994.1| 191|Homo sapiens HP1Hs alpha protein.
Length = 191
Score = 172 bits (418), Expect = 1e-42
Identities = 84/174 (48%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Frame = +3
Query: 99 TNQKPKRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXX 278
++ + + ++VEKVLDRR+ G +EY LKWKG+S+E NTWEPE NLDCP+LI
Sbjct: 12 SSSEDEEEYVVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYK 71
Query: 279 XXXXXXXXX---XXXXXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATD 449
D+ F+RGLEPEKIIGATD
Sbjct: 72 KMKEGENNKPREKSESNKRKSNFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATD 131
Query: 450 SSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERLTWHTPALDEGNNE 611
S G+LMFLMKW+ TDEADLV AK+ANV+CPQ+VI FYEERLTWH D N E
Sbjct: 132 SCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKE 185
>L07515-1|AAA72327.1| 191|Homo sapiens protein ( Human
heterochromatin protein homologue (HP1) mRNA, complete
cds. ).
Length = 191
Score = 172 bits (418), Expect = 1e-42
Identities = 84/174 (48%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Frame = +3
Query: 99 TNQKPKRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXX 278
++ + + ++VEKVLDRR+ G +EY LKWKG+S+E NTWEPE NLDCP+LI
Sbjct: 12 SSSEDEEEYVVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYK 71
Query: 279 XXXXXXXXX---XXXXXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATD 449
D+ F+RGLEPEKIIGATD
Sbjct: 72 KMKEGENNKPREKSESNKRKSNFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATD 131
Query: 450 SSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERLTWHTPALDEGNNE 611
S G+LMFLMKW+ TDEADLV AK+ANV+CPQ+VI FYEERLTWH D N E
Sbjct: 132 SCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKE 185
>BC006821-1|AAH06821.1| 191|Homo sapiens chromobox homolog 5 (HP1
alpha homolog, Drosophila) protein.
Length = 191
Score = 172 bits (418), Expect = 1e-42
Identities = 84/174 (48%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Frame = +3
Query: 99 TNQKPKRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXX 278
++ + + ++VEKVLDRR+ G +EY LKWKG+S+E NTWEPE NLDCP+LI
Sbjct: 12 SSSEDEEEYVVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYK 71
Query: 279 XXXXXXXXX---XXXXXXXXXXXXXXXPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATD 449
D+ F+RGLEPEKIIGATD
Sbjct: 72 KMKEGENNKPREKSESNKRKSNFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATD 131
Query: 450 SSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERLTWHTPALDEGNNE 611
S G+LMFLMKW+ TDEADLV AK+ANV+CPQ+VI FYEERLTWH D N E
Sbjct: 132 SCGDLMFLMKWKDTDEADLVLAKEANVKCPQIVIAFYEERLTWHAYPEDAENKE 185
>AF106801-1|AAD21972.1| 153|Homo sapiens heterochromatin-specific
nonhistone protein protein.
Length = 153
Score = 151 bits (367), Expect = 2e-36
Identities = 75/150 (50%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Frame = +3
Query: 168 LEYYLKWKGYSDEDNTWEPEDNLDCPDLIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 347
+EY LKWKG+SDEDNTWEPE+NLDC DLI
Sbjct: 4 VEYLLKWKGFSDEDNTWEPEENLDCLDLIAEFLQSQKTAHETDKSEGGKHKADSDSEDKG 63
Query: 348 XPDLXXXXXXXXXXXXXXXFDRGLEPEKIIGATDSSGELMFLMKWQGTDEADLVPAKQAN 527
+ F RGLEPE+IIGATDSSGE+MFLMKW+ ++EADLVPAK+A+
Sbjct: 64 --EESKPKGKKEESEKPRGFARGLEPERIIGATDSSGEVMFLMKWKNSNEADLVPAKEAS 121
Query: 528 VRCPQVVIQFYEERLTWHT-PALDEGNNED 614
V+CPQVVI FYEERLTWH+ P+ D+ D
Sbjct: 122 VKCPQVVISFYEERLTWHSYPSEDDDKKND 151
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 81 PTRKKKTNQKPK---RNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDL 251
P KK+ ++KP+ R E+++ +G + + +KWK ++ D E ++ CP +
Sbjct: 68 PKGKKEESEKPRGFARGLEPERIIGATDSSGEVMFLMKWKNSNEADLVPAKEASVKCPQV 127
Query: 252 I 254
+
Sbjct: 128 V 128
>BC014380-1|AAH14380.1| 73|Homo sapiens Unknown (protein for
IMAGE:4045143) protein.
Length = 73
Score = 111 bits (266), Expect = 3e-24
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = +3
Query: 405 FDRGLEPEKIIGATDSSGELMFLMKWQGTDEADLVPAKQANVRCPQVVIQFYEERLTWHT 584
F RGL+PE+IIGATDSSGELMFLMKW+ +DEADLV AK+AN++CPQ+VI FYEERLTWH+
Sbjct: 7 FARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWHS 66
Query: 585 PALDE 599
DE
Sbjct: 67 CPEDE 71
Score = 30.7 bits (66), Expect = 4.7
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 132 EKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLI 254
E+++ +G L + +KWK + D E N+ CP ++
Sbjct: 14 ERIIGATDSSGELMFLMKWKDSDEADLVLAKEANMKCPQIV 54
>BC119760-1|AAI19761.1| 211|Homo sapiens chromobox homolog 2 (Pc
class homolog, Drosophila) protein.
Length = 211
Score = 54.0 bits (124), Expect = 4e-07
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +3
Query: 123 FLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLI 254
F E +L +R++ G LEY +KW+G+S + N+WEPE+N+ P L+
Sbjct: 12 FAAECILSKRLRKGKLEYLVKWRGWSSKHNSWEPEENILDPRLL 55
>BC119759-1|AAI19760.1| 211|Homo sapiens chromobox homolog 2 (Pc
class homolog, Drosophila) protein.
Length = 211
Score = 54.0 bits (124), Expect = 4e-07
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +3
Query: 123 FLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLI 254
F E +L +R++ G LEY +KW+G+S + N+WEPE+N+ P L+
Sbjct: 12 FAAECILSKRLRKGKLEYLVKWRGWSSKHNSWEPEENILDPRLL 55
>BC019289-1|AAH19289.1| 389|Homo sapiens chromobox homolog 8 (Pc
class homolog, Drosophila) protein.
Length = 389
Score = 54.0 bits (124), Expect = 4e-07
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +3
Query: 114 KRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+R F E +L RRI+ G +EY +KWKG+S + +TWEPE+N+
Sbjct: 8 ERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENI 48
>BC009376-1|AAH09376.1| 389|Homo sapiens chromobox homolog 8 (Pc
class homolog, Drosophila) protein.
Length = 389
Score = 54.0 bits (124), Expect = 4e-07
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +3
Query: 114 KRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+R F E +L RRI+ G +EY +KWKG+S + +TWEPE+N+
Sbjct: 8 ERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENI 48
>BC008937-1|AAH08937.1| 389|Homo sapiens chromobox homolog 8 (Pc
class homolog, Drosophila) protein.
Length = 389
Score = 54.0 bits (124), Expect = 4e-07
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +3
Query: 114 KRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+R F E +L RRI+ G +EY +KWKG+S + +TWEPE+N+
Sbjct: 8 ERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENI 48
>BC004252-1|AAH04252.1| 211|Homo sapiens chromobox homolog 2 (Pc
class homolog, Drosophila) protein.
Length = 211
Score = 54.0 bits (124), Expect = 4e-07
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +3
Query: 123 FLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLI 254
F E +L +R++ G LEY +KW+G+S + N+WEPE+N+ P L+
Sbjct: 12 FAAECILSKRLRKGKLEYLVKWRGWSSKHNSWEPEENILDPRLL 55
>AK074560-1|BAC11061.1| 389|Homo sapiens protein ( Homo sapiens
cDNA FLJ90079 fis, clone HEMBA1004785, weakly similar to
MODIFIER 3 PROTEIN. ).
Length = 389
Score = 54.0 bits (124), Expect = 4e-07
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +3
Query: 114 KRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+R F E +L RRI+ G +EY +KWKG+S + +TWEPE+N+
Sbjct: 8 ERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENI 48
>AF266479-1|AAF76328.2| 389|Homo sapiens rectachrome 1 protein.
Length = 389
Score = 54.0 bits (124), Expect = 4e-07
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +3
Query: 114 KRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+R F E +L RRI+ G +EY +KWKG+S + +TWEPE+N+
Sbjct: 8 ERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENI 48
>AF174482-1|AAG09180.1| 389|Homo sapiens polycomb 3 protein.
Length = 389
Score = 54.0 bits (124), Expect = 4e-07
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +3
Query: 114 KRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+R F E +L RRI+ G +EY +KWKG+S + +TWEPE+N+
Sbjct: 8 ERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENI 48
>BC003542-1|AAH03542.2| 860|Homo sapiens M-phase phosphoprotein,
mpp8 protein.
Length = 860
Score = 53.6 bits (123), Expect = 6e-07
Identities = 21/45 (46%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 FLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL-DCPDLI 254
F VEK+LD + + G + Y ++WKGY+ +D+TWEPE +L DC +++
Sbjct: 59 FEVEKILDMKTEGGKVLYKVRWKGYTSDDDTWEPEIHLEDCKEVL 103
>AL359457-4|CAI16671.1| 860|Homo sapiens M-phase phosphoprotein,
mpp protein.
Length = 860
Score = 53.6 bits (123), Expect = 6e-07
Identities = 21/45 (46%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 FLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL-DCPDLI 254
F VEK+LD + + G + Y ++WKGY+ +D+TWEPE +L DC +++
Sbjct: 59 FEVEKILDMKTEGGKVLYKVRWKGYTSDDDTWEPEIHLEDCKEVL 103
>AL354808-3|CAI41002.1| 860|Homo sapiens M-phase phosphoprotein,
mpp protein.
Length = 860
Score = 53.6 bits (123), Expect = 6e-07
Identities = 21/45 (46%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 FLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL-DCPDLI 254
F VEK+LD + + G + Y ++WKGY+ +D+TWEPE +L DC +++
Sbjct: 59 FEVEKILDMKTEGGKVLYKVRWKGYTSDDDTWEPEIHLEDCKEVL 103
>BC014967-1|AAH14967.1| 290|Homo sapiens CBX4 protein protein.
Length = 290
Score = 53.2 bits (122), Expect = 8e-07
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 123 FLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLI 254
F VE + +RI+ G +EY +KW+G+S + NTWEPE+N+ P L+
Sbjct: 11 FAVESIEKKRIRKGRVEYLVKWRGWSPKYNTWEPEENILDPRLL 54
>AY390430-1|AAQ97596.1| 290|Homo sapiens NS5ATP1-binding protein 16
protein.
Length = 290
Score = 53.2 bits (122), Expect = 8e-07
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 123 FLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLI 254
F VE + +RI+ G +EY +KW+G+S + NTWEPE+N+ P L+
Sbjct: 11 FAVESIEKKRIRKGRVEYLVKWRGWSPKYNTWEPEENILDPRLL 54
>AF013956-1|AAB80718.1| 558|Homo sapiens Polycomb 2 homolog
protein.
Length = 558
Score = 53.2 bits (122), Expect = 8e-07
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +3
Query: 123 FLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLI 254
F VE + +RI+ G +EY +KW+G+S + NTWEPE+N+ P L+
Sbjct: 11 FAVESIEKKRIRKGRVEYLVKWRGWSPKYNTWEPEENILDPRLL 54
>BC064900-1|AAH64900.1| 412|Homo sapiens chromobox homolog 6
protein.
Length = 412
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = +3
Query: 114 KRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+R F E ++ RRI+ G +EY +KWKG++ + +TWEPE+N+
Sbjct: 8 ERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENI 48
>BC012111-1|AAH12111.1| 412|Homo sapiens chromobox homolog 6
protein.
Length = 412
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = +3
Query: 114 KRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+R F E ++ RRI+ G +EY +KWKG++ + +TWEPE+N+
Sbjct: 8 ERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENI 48
>AL008583-3|CAA15431.1| 412|Homo sapiens chromobox homolog 6
protein.
Length = 412
Score = 52.0 bits (119), Expect = 2e-06
Identities = 19/41 (46%), Positives = 31/41 (75%)
Frame = +3
Query: 114 KRNFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+R F E ++ RRI+ G +EY +KWKG++ + +TWEPE+N+
Sbjct: 8 ERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENI 48
>BC108725-1|AAI08726.1| 544|Homo sapiens chromodomain protein,
Y-like protein.
Length = 544
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/44 (50%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNL-DCPDLI 254
VE+++D+R K G EY ++WKGY ED+TWEPE +L +C + I
Sbjct: 9 VERIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYI 52
>BC029360-1|AAH29360.1| 230|Homo sapiens SUV39H2 protein protein.
Length = 230
Score = 51.6 bits (118), Expect = 2e-06
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +3
Query: 120 NFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQ 257
N+ VE + D ++ + Y +KWKG+ D NTWEP NL CP L+Q
Sbjct: 46 NYEVEYLCDYKVVKDMEYYLVKWKGWPDSTNTWEPLQNLKCPLLLQ 91
>AL360083-12|CAI40028.1| 410|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 410
Score = 51.6 bits (118), Expect = 2e-06
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +3
Query: 120 NFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQ 257
N+ VE + D ++ + Y +KWKG+ D NTWEP NL CP L+Q
Sbjct: 46 NYEVEYLCDYKVVKDMEYYLVKWKGWPDSTNTWEPLQNLKCPLLLQ 91
>AL360083-11|CAI40029.1| 230|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 230
Score = 51.6 bits (118), Expect = 2e-06
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +3
Query: 120 NFLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLIQ 257
N+ VE + D ++ + Y +KWKG+ D NTWEP NL CP L+Q
Sbjct: 46 NYEVEYLCDYKVVKDMEYYLVKWKGWPDSTNTWEPLQNLKCPLLLQ 91
>AL359643-1|CAH73737.1| 598|Homo sapiens chromodomain protein,
Y-like protein.
Length = 598
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/44 (50%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNL-DCPDLI 254
VE+++D+R K G EY ++WKGY ED+TWEPE +L +C + I
Sbjct: 63 VERIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYI 106
>AL356747-2|CAC36888.2| 598|Homo sapiens chromodomain protein,
Y-like protein.
Length = 598
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/44 (50%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNL-DCPDLI 254
VE+++D+R K G EY ++WKGY ED+TWEPE +L +C + I
Sbjct: 63 VERIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYI 106
>AL022725-1|CAI20892.1| 598|Homo sapiens chromodomain protein,
Y-like protein.
Length = 598
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/44 (50%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNL-DCPDLI 254
VE+++D+R K G EY ++WKGY ED+TWEPE +L +C + I
Sbjct: 63 VERIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYI 106
>AF081259-1|AAD22735.1| 598|Homo sapiens testis-specific
chromodomain Y-like protein protein.
Length = 598
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/44 (50%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNL-DCPDLI 254
VE+++D+R K G EY ++WKGY ED+TWEPE +L +C + I
Sbjct: 63 VERIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYI 106
>AF081258-1|AAD22734.1| 598|Homo sapiens testis-specific
chromodomain Y-like protein protein.
Length = 598
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/44 (50%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNL-DCPDLI 254
VE+++D+R K G EY ++WKGY ED+TWEPE +L +C + I
Sbjct: 63 VERIVDKRKNKKGKTEYLVRWKGYDSEDDTWEPEQHLVNCEEYI 106
>BC132955-1|AAI32956.1| 554|Homo sapiens chromodomain protein,
Y-linked, 1 protein.
Length = 554
Score = 50.0 bits (114), Expect = 7e-06
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +3
Query: 117 RNFLVEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+ F VE ++D+R KNG +Y ++WKGY +D+TWEPE +L
Sbjct: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHL 44
>BC132929-1|AAI32930.1| 554|Homo sapiens chromodomain protein,
Y-linked, 1B protein.
Length = 554
Score = 50.0 bits (114), Expect = 7e-06
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +3
Query: 117 RNFLVEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+ F VE ++D+R KNG +Y ++WKGY +D+TWEPE +L
Sbjct: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHL 44
>BC130428-1|AAI30429.1| 541|Homo sapiens chromodomain protein,
Y-linked, 2B protein.
Length = 541
Score = 50.0 bits (114), Expect = 7e-06
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +3
Query: 117 RNFLVEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+ F VE ++D+R KNG +Y ++WKGY +D+TWEPE +L
Sbjct: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHL 44
>BC130426-1|AAI30427.1| 541|Homo sapiens chromodomain protein,
Y-linked, 2B protein.
Length = 541
Score = 50.0 bits (114), Expect = 7e-06
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +3
Query: 117 RNFLVEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+ F VE ++D+R KNG +Y ++WKGY +D+TWEPE +L
Sbjct: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHL 44
>BC069087-1|AAH69087.1| 541|Homo sapiens chromodomain protein,
Y-linked, 2B protein.
Length = 541
Score = 50.0 bits (114), Expect = 7e-06
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +3
Query: 117 RNFLVEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+ F VE ++D+R KNG +Y ++WKGY +D+TWEPE +L
Sbjct: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHL 44
>AF080598-1|AAD22733.1| 541|Homo sapiens testis-specific
chromodomain protein Y isoform 2 protein.
Length = 541
Score = 50.0 bits (114), Expect = 7e-06
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +3
Query: 117 RNFLVEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+ F VE ++D+R KNG +Y ++WKGY +D+TWEPE +L
Sbjct: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHL 44
>AF080597-1|AAD22732.1| 540|Homo sapiens testis-specific
chromodomain protein Y isoform 1 protein.
Length = 540
Score = 50.0 bits (114), Expect = 7e-06
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +3
Query: 117 RNFLVEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+ F VE ++D+R KNG +Y ++WKGY +D+TWEPE +L
Sbjct: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHL 44
>AF000981-1|AAC52116.1| 554|Homo sapiens testis-specific
ChromoDomain Y isoform 1 protein.
Length = 554
Score = 50.0 bits (114), Expect = 7e-06
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +3
Query: 117 RNFLVEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNL 236
+ F VE ++D+R KNG +Y ++WKGY +D+TWEPE +L
Sbjct: 4 QEFEVEAIVDKRQDKNGNTQYLVRWKGYDKQDDTWEPEQHL 44
>BC051773-1|AAH51773.1| 251|Homo sapiens chromobox homolog 7
protein.
Length = 251
Score = 49.2 bits (112), Expect = 1e-05
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +3
Query: 123 FLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLI 254
F VE + +R++ G +EY +KWKG+ + +TWEPE+++ P L+
Sbjct: 11 FAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILDPRLV 54
>AL031846-3|CAB36555.1| 251|Homo sapiens chromobox homolog 7
protein.
Length = 251
Score = 49.2 bits (112), Expect = 1e-05
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +3
Query: 123 FLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLI 254
F VE + +R++ G +EY +KWKG+ + +TWEPE+++ P L+
Sbjct: 11 FAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILDPRLV 54
>CR457372-1|CAG33653.1| 350|Homo sapiens SUV39H2 protein.
Length = 350
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 168 LEYYL-KWKGYSDEDNTWEPEDNLDCPDLIQ 257
+EYYL KWKG+ D NTWEP NL CP L+Q
Sbjct: 1 MEYYLVKWKGWPDSTNTWEPLQNLKCPLLLQ 31
>BC007754-1|AAH07754.1| 350|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 350
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 168 LEYYL-KWKGYSDEDNTWEPEDNLDCPDLIQ 257
+EYYL KWKG+ D NTWEP NL CP L+Q
Sbjct: 1 MEYYLVKWKGWPDSTNTWEPLQNLKCPLLLQ 31
>AL360083-15|CAI40032.1| 350|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 350
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 168 LEYYL-KWKGYSDEDNTWEPEDNLDCPDLIQ 257
+EYYL KWKG+ D NTWEP NL CP L+Q
Sbjct: 1 MEYYLVKWKGWPDSTNTWEPLQNLKCPLLLQ 31
>AL360083-14|CAI40031.1| 152|Homo sapiens suppressor of variegation
3-9 homolog 2 (Drosophila) protein.
Length = 152
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 168 LEYYL-KWKGYSDEDNTWEPEDNLDCPDLIQ 257
+EYYL KWKG+ D NTWEP NL CP L+Q
Sbjct: 1 MEYYLVKWKGWPDSTNTWEPLQNLKCPLLLQ 31
>AK027067-1|BAB15645.1| 350|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23414 fis, clone HEP20704. ).
Length = 350
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +3
Query: 168 LEYYL-KWKGYSDEDNTWEPEDNLDCPDLIQ 257
+EYYL KWKG+ D NTWEP NL CP L+Q
Sbjct: 1 MEYYLVKWKGWPDSTNTWEPLQNLKCPLLLQ 31
>DQ064603-1|AAY68391.1| 158|Homo sapiens chromobox-like 7 protein.
Length = 158
Score = 47.6 bits (108), Expect = 4e-05
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +3
Query: 123 FLVEKVLDRRIKNGVLEYYLKWKGYSDEDNTWEPEDNLDCPDLI 254
F VE +R++ G +EY +KWKG+ + +TWEPE+++ P L+
Sbjct: 11 FAVESFRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILDPRLV 54
>BC100806-1|AAI00807.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDN-LDCPDLI 254
VE+++D+R K G EY ++WKGY ++TWEPE + L C + I
Sbjct: 9 VERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFI 52
>BC100805-1|AAI00806.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDN-LDCPDLI 254
VE+++D+R K G EY ++WKGY ++TWEPE + L C + I
Sbjct: 9 VERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFI 52
>BC100804-1|AAI00805.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDN-LDCPDLI 254
VE+++D+R K G EY ++WKGY ++TWEPE + L C + I
Sbjct: 9 VERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFI 52
>BC100803-1|AAI00804.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDN-LDCPDLI 254
VE+++D+R K G EY ++WKGY ++TWEPE + L C + I
Sbjct: 9 VERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFI 52
>BC069440-1|AAH69440.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDN-LDCPDLI 254
VE+++D+R K G EY ++WKGY ++TWEPE + L C + I
Sbjct: 9 VERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFI 52
>AY273798-1|AAP83842.1| 506|Homo sapiens chromodomain Y-like
protein 2 protein.
Length = 506
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDN-LDCPDLI 254
VE+++D+R K G EY ++WKGY ++TWEPE + L C + I
Sbjct: 9 VERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFI 52
>AK096185-1|BAC04720.1| 506|Homo sapiens protein ( Homo sapiens
cDNA FLJ38866 fis, clone MESAN2013022, moderately
similar to Homo sapiens testis-specific chromodomain
Y-like protein (CDYL) mRNA. ).
Length = 506
Score = 46.8 bits (106), Expect = 7e-05
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDN-LDCPDLI 254
VE+++D+R K G EY ++WKGY ++TWEPE + L C + I
Sbjct: 9 VERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFI 52
>CR541746-1|CAG46546.1| 412|Homo sapiens SUV39H1 protein.
Length = 412
Score = 44.4 bits (100), Expect = 4e-04
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 120 NFLVEKVLDRRIKNGVLEYYL-KWKGYSDEDNTWEPEDNLDCPDLIQ 257
+F VE + D + K EYYL KW+GY D ++TWEP NL C +++
Sbjct: 42 DFEVEYLCDYK-KIREQEYYLVKWRGYPDSESTWEPRQNLKCVRILK 87
>BC006238-1|AAH06238.1| 412|Homo sapiens suppressor of variegation
3-9 homolog 1 (Drosophila) protein.
Length = 412
Score = 44.4 bits (100), Expect = 4e-04
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 120 NFLVEKVLDRRIKNGVLEYYL-KWKGYSDEDNTWEPEDNLDCPDLIQ 257
+F VE + D + K EYYL KW+GY D ++TWEP NL C +++
Sbjct: 42 DFEVEYLCDYK-KIREQEYYLVKWRGYPDSESTWEPRQNLKCVRILK 87
>AK223071-1|BAD96791.1| 412|Homo sapiens suppressor of variegation
3-9 homolog 1 variant protein.
Length = 412
Score = 44.4 bits (100), Expect = 4e-04
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 120 NFLVEKVLDRRIKNGVLEYYL-KWKGYSDEDNTWEPEDNLDCPDLIQ 257
+F VE + D + K EYYL KW+GY D ++TWEP NL C +++
Sbjct: 42 DFEVEYLCDYK-KIREQEYYLVKWRGYPDSESTWEPRQNLKCVRILK 87
>AF019968-1|AAB92224.1| 412|Homo sapiens Su(var)3-9 homolog
protein.
Length = 412
Score = 44.4 bits (100), Expect = 4e-04
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +3
Query: 120 NFLVEKVLDRRIKNGVLEYYL-KWKGYSDEDNTWEPEDNLDCPDLIQ 257
+F VE + D + K EYYL KW+GY D ++TWEP NL C +++
Sbjct: 42 DFEVEYLCDYK-KIREQEYYLVKWRGYPDSESTWEPRQNLKCVRILK 87
>BC117134-1|AAI17135.1| 1709|Homo sapiens chromodomain helicase DNA
binding protein 1 protein.
Length = 1709
Score = 36.7 bits (81), Expect = 0.072
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 162 GVLEYYLKWKGYSDEDNTWEPEDNL 236
G ++Y +KWKG+S NTWE E+ L
Sbjct: 314 GEIQYLIKWKGWSHIHNTWETEETL 338
>AF006513-1|AAB87381.1| 1709|Homo sapiens CHD1 protein.
Length = 1709
Score = 36.7 bits (81), Expect = 0.072
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 162 GVLEYYLKWKGYSDEDNTWEPEDNL 236
G ++Y +KWKG+S NTWE E+ L
Sbjct: 314 GEIQYLIKWKGWSHIHNTWETEETL 338
>BT007050-1|AAP35699.1| 501|Homo sapiens chromodomain helicase DNA
binding protein 2 protein.
Length = 501
Score = 34.7 bits (76), Expect = 0.29
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 144 DRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 236
D G ++Y +KWKG+S +TWE E++L
Sbjct: 297 DTEKDEGEIQYLIKWKGWSYIHSTWESEESL 327
>BC020810-1|AAH20810.1| 501|Homo sapiens chromodomain helicase DNA
binding protein 2 protein.
Length = 501
Score = 34.7 bits (76), Expect = 0.29
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 144 DRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 236
D G ++Y +KWKG+S +TWE E++L
Sbjct: 297 DTEKDEGEIQYLIKWKGWSYIHSTWESEESL 327
>BC007347-1|AAH07347.1| 501|Homo sapiens chromodomain helicase DNA
binding protein 2 protein.
Length = 501
Score = 34.7 bits (76), Expect = 0.29
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 144 DRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 236
D G ++Y +KWKG+S +TWE E++L
Sbjct: 297 DTEKDEGEIQYLIKWKGWSYIHSTWESEESL 327
>AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein.
Length = 1739
Score = 34.7 bits (76), Expect = 0.29
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 144 DRRIKNGVLEYYLKWKGYSDEDNTWEPEDNL 236
D G ++Y +KWKG+S +TWE E++L
Sbjct: 297 DTEKDEGEIQYLIKWKGWSYIHSTWESEESL 327
>BC018088-1|AAH18088.1| 29|Homo sapiens LOC645158 protein protein.
Length = 29
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 129 VEKVLDRRIKNGVLEYYLKWKGYSDEDN 212
VEKVL + + NG +EY LK KG++ DN
Sbjct: 1 VEKVLHQGVVNGKVEYSLKRKGFTLADN 28
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase
protein.
Length = 2000
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNLDCPD 248
V ++++ + K G Y +KW+ + +TWE ED ++ P+
Sbjct: 633 VHRIINHSVDKKGNYHYLVKWRDLPYDQSTWE-EDEMNIPE 672
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 129 VEKVLDRRI-KNGVLEYYLKWKGYSDEDNTWEPEDNLDCPD 248
V ++++ + K G Y +KW+ + +TWE ED ++ P+
Sbjct: 633 VHRIINHSVDKKGNYHYLVKWRDLPYDQSTWE-EDEMNIPE 672
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,960,127
Number of Sequences: 237096
Number of extensions: 1443413
Number of successful extensions: 2994
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 2840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2994
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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