Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_H24
         (398 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      26   0.12 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.9  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 26.2 bits (55), Expect = 0.12
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 117 CA*TVPCEGKKYWTLQRICLC 179
           CA  +   G K W ++R C+C
Sbjct: 69  CASYIQVSGSKIWQMERSCMC 89


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +3

Query: 171 CLCALQVQGRCCES 212
           C C L   GR CES
Sbjct: 324 CNCKLGFMGRHCES 337


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,799
Number of Sequences: 336
Number of extensions: 1468
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)