Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_H24
(398 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 64 3e-11
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 43 9e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 40 9e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 40 9e-04
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 38 0.002
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 37 0.005
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 37 0.005
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 37 0.005
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 37 0.005
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 37 0.005
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 37 0.006
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 37 0.006
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 36 0.008
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 36 0.008
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 36 0.008
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 36 0.008
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 36 0.008
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 36 0.008
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 36 0.008
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 36 0.008
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 36 0.008
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 36 0.008
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 36 0.011
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 36 0.011
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 36 0.011
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 36 0.011
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 36 0.011
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 35 0.019
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 35 0.019
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 34 0.033
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 34 0.033
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 34 0.033
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 34 0.033
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 34 0.043
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 34 0.043
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 34 0.043
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 33 0.057
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.075
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.075
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 31 0.30
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 31 0.30
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 31 0.40
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 30 0.53
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 29 1.2
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 29 1.2
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 29 1.2
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 29 1.6
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 29 1.6
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 29 1.6
AL032646-11|CAE46682.1| 193|Caenorhabditis elegans Hypothetical... 28 2.8
AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical... 28 2.8
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 27 5.0
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 27 6.5
AC024791-38|AAY55888.1| 246|Caenorhabditis elegans Hypothetical... 27 6.5
AC006664-2|AAF39903.1| 346|Caenorhabditis elegans Hypothetical ... 26 8.7
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 64.5 bits (150), Expect = 3e-11
Identities = 31/75 (41%), Positives = 48/75 (64%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
++NL E ++ DL G V ++++A++K TG KGFA+V F+ R DAA+AI LN
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 232 HGYDHLILNVEWSKP 276
H++L VEW++P
Sbjct: 240 IRMYHMVLKVEWTRP 254
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 46.0 bits (104), Expect = 1e-05
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ NL E D+ L K +G V ++ + +K TG CKGFA V F F A A +L+G
Sbjct: 283 LRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDG 342
Query: 232 HGYDHLILNV 261
+ + ++++
Sbjct: 343 YVFKGRMMHI 352
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 44.8 bits (101), Expect = 2e-05
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ NLS++ E D+ D+ FG ++K L ++ +G+ +GF +++F DA A L
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 232 HGYDHLILNVEWS 270
D + V++S
Sbjct: 140 TDLDGHKIRVDFS 152
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 42.7 bits (96), Expect = 9e-05
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ N+ E +I + G V+ + + ++ TG +GFA+V F A A +A++ LNG
Sbjct: 10 VGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNG 69
Query: 232 HGYDHLILNVEWS 270
++ L V ++
Sbjct: 70 VAFNGRNLRVNYA 82
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 39.5 bits (88), Expect = 9e-04
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I LS E D+ + +G V + L ++K TG KGFA++ +K + A+ + NG
Sbjct: 42 IGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNG 101
Query: 232 HGYDHLILNVE 264
++ V+
Sbjct: 102 ISLHKRMIRVD 112
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 39.5 bits (88), Expect = 9e-04
Identities = 21/83 (25%), Positives = 39/83 (46%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I N+ E +++L K + + ++ K+ +A++HF R D KA++ NG
Sbjct: 381 IRNIKEAVTEEKLNELFKEYASLDRVKKVKD--------YAFIHFNERDDCLKAMEEWNG 432
Query: 232 HGYDHLILNVEWSKPPQNN*KVP 300
+ ++ +KPPQ K P
Sbjct: 433 KELEGTVVEASLAKPPQEKKKKP 455
Score = 29.9 bits (64), Expect = 0.70
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ ++ E + L + G + L L + +G +G+A+V + + DAA A ++ +G
Sbjct: 204 VGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTYDG 263
Query: 232 H 234
H
Sbjct: 264 H 264
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +1
Query: 79 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGH 234
E ++ + FG V ++ +A+ + TG+ KG+AYV F +A A A +S+NG+
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMNGY 96
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSL 225
+ NLS E I + + FG + + K K +GH KG A+VHF +A+ I+ +
Sbjct: 267 LRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGV 324
Score = 28.7 bits (61), Expect = 1.6
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLA-KEKSTGHCKGFAYVHFKFRADAAKAIQSLN 228
I NL + D+ +L G ++ L K C GF ++ F +ADA K + N
Sbjct: 99 IRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGREFFN 158
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 37.1 bits (82), Expect = 0.005
Identities = 15/70 (21%), Positives = 34/70 (48%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ N E ++ + G ++ + + ++ TG +GFA++ F A +A++ +NG
Sbjct: 9 VGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNG 68
Query: 232 HGYDHLILNV 261
++ L V
Sbjct: 69 AEFNGRPLRV 78
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 37.1 bits (82), Expect = 0.005
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I L N+ E + +L+ FGP+ K + S G+ KG+A+ + +AI LNG
Sbjct: 295 IGGLPNYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNG 353
Query: 232 H--GYDHLILNVEWSKPPQNN*KVP 300
G L++ + + ++N +P
Sbjct: 354 MQLGDKQLVVQLACANQQRHNTNLP 378
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 37.1 bits (82), Expect = 0.005
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I L N+ E + +L+ FGP+ K + S G+ KG+A+ + +AI LNG
Sbjct: 295 IGGLPNYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNG 353
Query: 232 H--GYDHLILNVEWSKPPQNN*KVP 300
G L++ + + ++N +P
Sbjct: 354 MQLGDKQLVVQLACANQQRHNTNLP 378
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 37.1 bits (82), Expect = 0.005
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I L N+ E + +L+ FGP+ K + S G+ KG+A+ + +AI LNG
Sbjct: 270 IGGLPNYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNG 328
Query: 232 H--GYDHLILNVEWSKPPQNN*KVP 300
G L++ + + ++N +P
Sbjct: 329 MQLGDKQLVVQLACANQQRHNTNLP 353
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 37.1 bits (82), Expect = 0.005
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I L N+ E + +L+ FGP+ K + S G+ KG+A+ + +AI LNG
Sbjct: 273 IGGLPNYLTEDQVKELLCSFGPL-KAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLNG 331
Query: 232 H--GYDHLILNVEWSKPPQNN*KVP 300
G L++ + + ++N +P
Sbjct: 332 MQLGDKQLVVQLACANQQRHNTNLP 356
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 36.7 bits (81), Expect = 0.006
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ N E D+ + G V + + ++ TG +GFA+V F A A +A+ NG
Sbjct: 8 VGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQFNG 67
Query: 232 HGYDHLILNVEWSKPPQN 285
++ L V ++ N
Sbjct: 68 VDFNGRALRVNLAQNRNN 85
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 36.7 bits (81), Expect = 0.006
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 109 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS--KPPQ 282
FG V + + ++ +T KG+ +V + R DA +AI +NG + W+ KP +
Sbjct: 155 FGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDE 214
Query: 283 N 285
+
Sbjct: 215 D 215
Score = 33.1 bits (72), Expect = 0.075
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ N++N E +I FGP++ E T +G+A+V F+ + AA+AI +N
Sbjct: 260 VGNIANLG-EDEIRRAFDRFGPIN------EVRTFKIQGYAFVKFETKESAARAIVQMNN 312
Query: 232 HGYDHLILNVEWSK 273
I+ W K
Sbjct: 313 ADIGGQIVRCSWGK 326
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 36.3 bits (80), Expect = 0.008
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ NLS + E + +L G V ++ + ++ GF +V + R DA A+Q+++
Sbjct: 41 VGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQNISN 100
Query: 232 HGYDHLILNVEW 267
D ++ +W
Sbjct: 101 TRMDDRVIRADW 112
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 36.3 bits (80), Expect = 0.008
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ +LS+ + + + FG V + ++ +T KG+ +V + R +A +AI+ +NG
Sbjct: 26 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 85
Query: 232 HGYDHLILNVEWS 270
+ W+
Sbjct: 86 QWLGRRTIRTNWA 98
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 163 KGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 273
+G+A+V F + AAKAI +N ++ W K
Sbjct: 162 QGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 198
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 36.3 bits (80), Expect = 0.008
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ +LS+ + + + FG V + ++ +T KG+ +V + R +A +AI+ +NG
Sbjct: 36 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 95
Query: 232 HGYDHLILNVEWS 270
+ W+
Sbjct: 96 QWLGRRTIRTNWA 108
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 163 KGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 273
+G+A+V F + AAKAI +N ++ W K
Sbjct: 172 QGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 208
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 36.3 bits (80), Expect = 0.008
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ +LS+ + + + FG V + ++ +T KG+ +V + R +A +AI+ +NG
Sbjct: 139 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 198
Query: 232 HGYDHLILNVEWS 270
+ W+
Sbjct: 199 QWLGRRTIRTNWA 211
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 163 KGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 273
+G+A+V F + AAKAI +N ++ W K
Sbjct: 275 QGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 311
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 36.3 bits (80), Expect = 0.008
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ +LS+ + + + FG V + ++ +T KG+ +V + R +A +AI+ +NG
Sbjct: 107 VGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNG 166
Query: 232 HGYDHLILNVEWS 270
+ W+
Sbjct: 167 QWLGRRTIRTNWA 179
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 163 KGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 273
+G+A+V F + AAKAI +N ++ W K
Sbjct: 243 QGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWGK 279
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 36.3 bits (80), Expect = 0.008
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 112 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 273
GPV + + ++ +T G+AYV+F+ ADA +A+ ++N + + WS+
Sbjct: 56 GPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQ 109
Score = 33.9 bits (74), Expect = 0.043
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I NL I D FG + +A ++ G KG+ +VHF+ A AIQ +NG
Sbjct: 124 IKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETEEAAQNAIQKVNG 182
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 36.3 bits (80), Expect = 0.008
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I NLS D+ + +G + +++ ++K + KGF +V F R DA A+ +G
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82
Query: 232 HGYDHLILNVEWSK 273
D L V +K
Sbjct: 83 KLVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 36.3 bits (80), Expect = 0.008
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I NLS D+ + +G + +++ ++K + KGF +V F R DA A+ +G
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82
Query: 232 HGYDHLILNVEWSK 273
D L V +K
Sbjct: 83 KLVDGRELRVTLAK 96
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 36.3 bits (80), Expect = 0.008
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 112 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 273
GPV + + ++ +T G+AYV+F+ ADA +A+ ++N + + WS+
Sbjct: 56 GPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQ 109
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 36.3 bits (80), Expect = 0.008
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 112 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 273
GPV + + ++ +T G+AYV+F+ ADA +A+ ++N + + WS+
Sbjct: 56 GPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTMNFEALHGKPMRIMWSQ 109
Score = 33.9 bits (74), Expect = 0.043
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I NL I D FG + +A ++ G KG+ +VHF+ A AIQ +NG
Sbjct: 124 IKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETEEAAQNAIQKVNG 182
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 35.9 bits (79), Expect = 0.011
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ N+S E I + G V + + ++ TG KG+ ++ F A AI++LNG
Sbjct: 22 VGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNLNG 81
Query: 232 HGYDHLILNVE 264
+ IL V+
Sbjct: 82 YELSGRILRVD 92
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 35.9 bits (79), Expect = 0.011
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 109 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQ 282
FG V + + + +G +GF +V F DAA AI ++N + V +++PP+
Sbjct: 34 FGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFARPPK 91
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 109 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
FGP+ + ++ + +TGH K FA+V ++ A A +S+NG
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Score = 30.7 bits (66), Expect = 0.40
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 79 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 228
E D+ + + FG + K LA+ + +GF Y+ F ++AI +N
Sbjct: 220 ETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 109 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
FGP+ + ++ + +TGH K FA+V ++ A A +S+NG
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Score = 30.7 bits (66), Expect = 0.40
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 79 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 228
E D+ + + FG + K LA+ + +GF Y+ F ++AI +N
Sbjct: 220 ETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 109 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
FGP+ + ++ + +TGH K FA+V ++ A A +S+NG
Sbjct: 125 FGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESMNG 165
Score = 30.7 bits (66), Expect = 0.40
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 79 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 228
E D+ + + FG + K LA+ + +GF Y+ F ++AI +N
Sbjct: 220 ETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 35.1 bits (77), Expect = 0.019
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 127 LYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNV 261
++L ++ +G KGFAYV F+ AI LNG + + +L V
Sbjct: 41 IHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKV 85
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 35.1 bits (77), Expect = 0.019
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 139 KEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVE 264
K K H +AYV F+ DA KAI ++G+ Y IL+ +
Sbjct: 55 KSKKVRHMSDYAYVTFETPEDAQKAINLVDGYDYKKFILSAQ 96
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 34.3 bits (75), Expect = 0.033
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +1
Query: 61 LSNFAVEADIDDLVKGF----GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 216
+ N E D L+ F GPV + + ++K TG KGFA+V+FK + + A+
Sbjct: 250 VGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 34.3 bits (75), Expect = 0.033
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I L++ E DI+ +G+G + + L GF +V F + DA A+ LNG
Sbjct: 7 IGRLTSRVSEKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVHDLNG 58
Query: 232 H--GYDHLILNVEWSKP 276
G + +IL ++SKP
Sbjct: 59 KELGGERVIL--DYSKP 73
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 34.3 bits (75), Expect = 0.033
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I L++ E DI+ +G+G + + L GF +V F + DA A+ LNG
Sbjct: 7 IGRLTSRVSEKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVHDLNG 58
Query: 232 H--GYDHLILNVEWSKP 276
G + +IL ++SKP
Sbjct: 59 KELGGERVIL--DYSKP 73
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 34.3 bits (75), Expect = 0.033
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I L++ E DI+ +G+G + + L GF +V F + DA A+ LNG
Sbjct: 7 IGRLTSRVSEKDIEHFFRGYGQIRDVLLKN--------GFGFVEFDDKRDAEDAVHDLNG 58
Query: 232 H--GYDHLILNVEWSKP 276
G + +IL ++SKP
Sbjct: 59 KELGGERVIL--DYSKP 73
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 33.9 bits (74), Expect = 0.043
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +1
Query: 112 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 273
GPV + + ++ ++ G+AYV+F+ ADA +A+ ++N + + WS+
Sbjct: 81 GPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQ 134
Score = 33.1 bits (72), Expect = 0.075
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I NL + D FG + +A + G+ KG+ +VHF+ A AI+ +NG
Sbjct: 149 IKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIEKVNG 207
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 33.9 bits (74), Expect = 0.043
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +1
Query: 112 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK 273
GPV + + ++ ++ G+AYV+F+ ADA +A+ ++N + + WS+
Sbjct: 81 GPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRIMWSQ 134
Score = 33.1 bits (72), Expect = 0.075
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I NL + D FG + +A + G+ KG+ +VHF+ A AI+ +NG
Sbjct: 149 IKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIEKVNG 207
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 33.9 bits (74), Expect = 0.043
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I NL I D FG + +A ++ G KG+ +VHF+ A AIQ +NG
Sbjct: 61 IKNLDKVIDNKSIYDTFSLFGNILSCKVAIDED-GFSKGYGFVHFETEEAAQNAIQKVNG 119
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 33.5 bits (73), Expect = 0.057
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHF 186
+ N+ A +I+ G G V ++ + ++ +GH KGFAYV F
Sbjct: 82 VGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEF 126
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.075
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 228
+ L E+ + +L+ GPV + + K++ T + +GF +V F DA AI+ LN
Sbjct: 17 VGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILN 75
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKL-YLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 228
+ NL E + D FG + ++ + ++ +G KGFA+++F + A++++N
Sbjct: 104 VGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMN 163
Query: 229 G 231
G
Sbjct: 164 G 164
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.075
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 228
+ L E+ + +L+ GPV + + K++ T + +GF +V F DA AI+ LN
Sbjct: 27 VGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILN 85
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKL-YLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 228
+ NL E + D FG + ++ + ++ +G KGFA+++F + A++++N
Sbjct: 114 VGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMN 173
Query: 229 G 231
G
Sbjct: 174 G 174
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 31.1 bits (67), Expect = 0.30
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1
Query: 109 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 270
FG V + + ++ T KG+ +V F + +A AI +NG + W+
Sbjct: 158 FGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWA 211
Score = 31.1 bits (67), Expect = 0.30
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ N+S +AD+ DL +G + ++ + K + +A+V ++ + A KAI +NG
Sbjct: 241 VGNISQQTTDADLRDLFSTYGDIAEVRIFKTQR------YAFVRYEKKECATKAIMEMNG 294
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 31.1 bits (67), Expect = 0.30
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
+ NLS+ + + L FG + + + ++ T CKG+A+V +A A+ SLNG
Sbjct: 378 VYNLSSDTDDTLLWQLFSQFGAIVNVKILRDL-TQQCKGYAFVSMSNYTEAYNAMLSLNG 436
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 30.7 bits (66), Expect = 0.40
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I N+ + +I++ KG G + K + K+K T K FAY+ F + A+ +NG
Sbjct: 59 IGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNG 117
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 30.3 bits (65), Expect = 0.53
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I L N A + D++ +G+G + + + GF +V F+ + DA A+ LNG
Sbjct: 6 IGRLPNRASDRDVEHFFRGYGKLSDVIMKN--------GFGFVDFQDQRDADDAVHDLNG 57
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK--FRADAA 207
I LS+ + + + +GPV + ++ +T H +GF +V F F A++A
Sbjct: 53 IGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESA 106
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK--FRADAA 207
I LS+ + + + +GPV + ++ +T H +GF +V F F A++A
Sbjct: 73 IGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESA 126
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK--FRADAA 207
I LS+ + + + +GPV + ++ +T H +GF +V F F A++A
Sbjct: 74 IGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESA 127
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 88 IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVE 264
I+ + GP+ +++AK GFA+V FK A A++ LNG L VE
Sbjct: 44 IEAVFSVMGPIKSIWMAKRPP-----GFAFVTFKRTVHAFDAVKYLNGKKICDLEAKVE 97
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 231
I N+ + ++++ KG G + + + K+K T K FAY+ F + A+ +NG
Sbjct: 65 IGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNG 123
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1
Query: 52 ISNLSNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 189
+ N+ + ++I++ G V ++ + K+K TG+ K FA+V F+
Sbjct: 50 VGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
>AL032646-11|CAE46682.1| 193|Caenorhabditis elegans Hypothetical
protein Y54E2A.11b protein.
Length = 193
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 76 VEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYD 243
+++ + +++ P KLY+ G C G + + A A++SLNG+ +D
Sbjct: 64 LQSVLKKVLERLDPAVKLYIPPSPEGG-CLGVLLTEWADQRSAQFAVKSLNGYAFD 118
>AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical
protein Y54E2A.11a protein.
Length = 725
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 76 VEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYD 243
+++ + +++ P KLY+ G C G + + A A++SLNG+ +D
Sbjct: 64 LQSVLKKVLERLDPAVKLYIPPSPEGG-CLGVLLTEWADQRSAQFAVKSLNGYAFD 118
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 91 DDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNV 261
DD+++ F P K+ + +GF +V F A ++ +SLNG + L+V
Sbjct: 98 DDIIELFRPFGKIIAVNYFAQ---QGFGFVQFNEAGSADESCRSLNGMSWKACCLDV 151
>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical
protein F21G4.6 protein.
Length = 1885
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 167 DLLMCTSSSGQMLRKQFNHLMVMVMII*F*TWNGLSLHKTIKKF 298
D++ ++S+ L +Q M +V+ +NGL L K++KKF
Sbjct: 332 DVICYSTSTDDQLSQQAIKFMFLVLQRGTEIYNGLDLFKSVKKF 375
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +1
Query: 79 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 219
++ ++ K +G + + + + TG +GFA + F + A KAI+
Sbjct: 38 KSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIE 84
>AC024791-38|AAY55888.1| 246|Caenorhabditis elegans Hypothetical
protein Y47G6A.32 protein.
Length = 246
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 129 VPCEGKKYWTLQRICLCALQVQG 197
VPC G L R+C+C L+ G
Sbjct: 84 VPCAGNAQQLLLRMCVCVLREHG 106
>AC006664-2|AAF39903.1| 346|Caenorhabditis elegans Hypothetical
protein H24O09.2 protein.
Length = 346
Score = 26.2 bits (55), Expect = 8.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 193 RADAAKAIQSLNGHGYDHLILNVEW 267
R D A+A +NG G++H + +W
Sbjct: 319 RTDGARATVKINGVGHNHFVQFFKW 343
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,665,917
Number of Sequences: 27780
Number of extensions: 142199
Number of successful extensions: 442
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -