Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_H24
         (398 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    24   0.56 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   1.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   3.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   3.9  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   6.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   6.9  

>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 117 CA*TVPCEGKKYWTLQRICLC 179
           C+  +   G K W ++R C+C
Sbjct: 57  CSSYLQVSGSKIWQMERSCMC 77


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +1

Query: 187 KFRADAAKAIQSLNGHGYDHLILNV 261
           +F  +  KA+ S+N   ++H +L +
Sbjct: 872 EFALELKKALSSINEQSFNHFVLKM 896



 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 301 MELFNCFVEA*TIPRSKS 248
           +++FNC V   TIP   S
Sbjct: 609 LDMFNCVVVEETIPSLNS 626


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = +1

Query: 202 AAKAIQSLNGHGYD-HL 249
           AA A+ S  GHG+D HL
Sbjct: 11  AAAAVTSAGGHGFDAHL 27


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = +1

Query: 202 AAKAIQSLNGHGYD-HL 249
           AA A+ S  GHG+D HL
Sbjct: 11  AAAAVTSAGGHGFDAHL 27


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 1   WS*SAPXCVVKT*LPSCISNLSNFAVE 81
           W   A  C +K+ +PS  S+ ++ A+E
Sbjct: 614 WGGKAGPCAIKSVVPSDESHWNDLAME 640


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 1   WS*SAPXCVVKT*LPSCISNLSNFAVE 81
           W   A  C +K+ +PS  S+ ++ A+E
Sbjct: 652 WGGKAGPCAIKSVVPSDESHWNDLAME 678


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 214 IQSLNGHGYDHLILN 258
           +Q+   H YDHL+ N
Sbjct: 460 LQTRTMHPYDHLVWN 474


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 284 TIKKFHLYTNL 316
           +I  +HLYTNL
Sbjct: 458 SISHYHLYTNL 468


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,008
Number of Sequences: 438
Number of extensions: 1593
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)