Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_H21
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   1.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   1.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   3.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.9  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/51 (23%), Positives = 22/51 (43%)
 Frame = +1

Query: 277 EEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSR 429
           +E+   L   + +E     +  + +  K KIE   +  D  TKK  + K +
Sbjct: 217 KEREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKK 267


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 252 IFIFYCTNSCV 220
           +F+F CTNSC+
Sbjct: 316 LFLFACTNSCM 326


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 252 IFIFYCTNSCV 220
           +F+F CTNSC+
Sbjct: 316 LFLFACTNSCM 326


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 328  SFDDNNLEFKKTKIEITEDKNDS-KTKKRGQNKSRPKIFKDGKES 459
            S+    +  KKTK E+ E+K  + + K++ + KS     + G  S
Sbjct: 1058 SWGTREVAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTS 1102


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 328  SFDDNNLEFKKTKIEITEDKNDS-KTKKRGQNKSRPKIFKDGKES 459
            S+    +  KKTK E+ E+K  + + K++ + KS     + G  S
Sbjct: 1058 SWGTREVAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTS 1102


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 328  SFDDNNLEFKKTKIEITEDKNDS-KTKKRGQNKSRPKIFKDGKES 459
            S+    +  KKTK E+ E+K  + + K++ + KS     + G  S
Sbjct: 1058 SWGTREVAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTS 1102


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 328  SFDDNNLEFKKTKIEITEDKNDS-KTKKRGQNKSRPKIFKDGKES 459
            S+    +  KKTK E+ E+K  + + K++ + KS     + G  S
Sbjct: 1058 SWGTREVAVKKTKKELEEEKKQAEEAKRKAKQKSLLGFLQSGGTS 1102


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -2

Query: 259 VTHIHLLLHKLLRWNSSYLCVM 194
           VT +HL +  +LR   +++C++
Sbjct: 247 VTFVHLAVLNILRVGKNFVCLL 268


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 252 IFIFYCTNSCVGILHIYVLCS 190
           I+ FYC +    +  +++LCS
Sbjct: 56  IYYFYCVSITFNVHLLFLLCS 76


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 229 VCAIKDEYVLQKSNIIEEKSYNLEKRKLD 315
           +C IK++ VL   N  EE+  + +  +LD
Sbjct: 78  LCEIKEKTVLSLRNTQEEEPPDPQLMRLD 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,717
Number of Sequences: 336
Number of extensions: 2715
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)