Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_H21
(656 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3 |Schizosaccha... 64 2e-11
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 35 0.009
SPCC16C4.05 |||RNase P and RNase MRP subunit |Schizosaccharomyce... 33 0.027
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 31 0.15
SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyc... 30 0.26
SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated |Schizosac... 29 0.78
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.1
SPCC126.13c |||histone deacetylase complex subunit, SAP128 famil... 27 3.1
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 27 3.1
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 27 3.1
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 27 3.1
SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomy... 27 3.1
SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter |Schizosa... 26 4.2
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 26 4.2
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 26 4.2
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 26 5.5
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 5.5
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 5.5
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 25 7.3
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 7.3
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 25 7.3
SPBP8B7.22 |erd2||HDEL receptor|Schizosaccharomyces pombe|chr 2|... 25 9.6
SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificit... 25 9.6
SPCC757.02c |||epimarase |Schizosaccharomyces pombe|chr 3|||Manual 25 9.6
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 25 9.6
>SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 617
Score = 63.7 bits (148), Expect = 2e-11
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Frame = +1
Query: 373 ITEDKNDS-KTKKRGQNKSRPKIFKDGKESKPCPTILDVESSEQLKICQYN-NCKFIHDS 546
+ +D N K K+RGQNK R KI + + CP I + + C Y NCKF HD
Sbjct: 17 VKQDGNKKRKRKERGQNKRREKIHVK-ENNALCPAI-SIGNE-----CPYKENCKFPHDV 69
Query: 547 XQFLNSKPKDIGDQCHVYKVRGKCPXGIACRYGSDH 654
+L +K DIGD+C +++ G CP G CR+ + H
Sbjct: 70 EAYLATKAPDIGDKCPIFERYGVCPAGFKCRWLAGH 105
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 35.1 bits (77), Expect = 0.009
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 4/107 (3%)
Frame = +1
Query: 208 MKNSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDK 387
+K + A+KD+ VLQ+ N +++ +K E +N E + I + ++
Sbjct: 40 IKTKVKDINALKDQLVLQEVNHEHKENVLTKKINFLEQQLQSSNNQAEESRNLISVLRNE 99
Query: 388 NDS-KTKKRGQNKSRPKIFKDGKESKPCPTILDVES---SEQLKICQ 516
N+S KT QNK + + + + + L +S SEQL I +
Sbjct: 100 NESLKTNLENQNKRFDALTTENQSLRRANSELQEQSKIASEQLSIAK 146
>SPCC16C4.05 |||RNase P and RNase MRP subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 201
Score = 33.5 bits (73), Expect = 0.027
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 217 SNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIE--ITEDKN 390
S AG A++D+ L K +++ N+E E A + N E++ TK+E IT K
Sbjct: 131 SRAGAIAVQDDSPLWK--YLKDLVMNIE-----EPQARWLSENPEYEVTKVEKIITSQKE 183
Query: 391 DSKTKKRGQNK 423
+ TKK G+N+
Sbjct: 184 NQGTKKEGKNE 194
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 31.1 bits (67), Expect = 0.15
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 511 CQYNN-CKFIHDSXQFLNSK--PKDIGDQCHVYKVRGKCPXGIACRYGSD 651
C+Y + C+F H + + PK ++C + + G CP G+ C + D
Sbjct: 341 CRYGSKCQFAHGNQELKEPPRHPKYKSERCRSFMMYGYCPYGLRCCFLHD 390
>SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 209
Score = 30.3 bits (65), Expect = 0.26
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 247 EYVLQKS-NIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKK 408
EY KS +II E S+N R+LD+S D+N + TK + + +N +K
Sbjct: 86 EYTASKSPSIISEASHNSPSRELDDSG---DENTSKLTGTKQSMLKARNRQAAQK 137
>SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 28.7 bits (61), Expect = 0.78
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +1
Query: 208 MKNSNAGVCAIKDEYVLQKSNIIEEKS--YNLEKRKLDESSASFDDNNLEFKKTKIEITE 381
++N +K + S + + KS + K+ L S +F D+N +F K TE
Sbjct: 119 LENEQKSYEEMKQNMAINNSRLADLKSKLHPYLKKGLKISHDNFSDSN-DFSFQKKLNTE 177
Query: 382 DKNDSKTKKRGQNKSRPKIF 441
D N SKT K + K F
Sbjct: 178 DSNTSKTSTLDMYKEKLKPF 197
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 280 EKSYNLEKRKLDESSASFDDNNLEF-KKTKIEITEDKNDSKTKKRGQNKS 426
EKS N KL E++ +F++ EF ++ K I ++K S + N++
Sbjct: 251 EKSLNERATKLSEANENFNNRFKEFEEREKSAIKQNKEQSSEGSKTANQT 300
>SPCC126.13c |||histone deacetylase complex subunit, SAP128 family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 145
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/34 (26%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -2
Query: 352 ILNCYHQMKRNSHLVYVFQDCMIFLQLC-WIFVT 254
+++ YHQ + +H++ +F+D + +Q+ W+ +T
Sbjct: 26 LISVYHQFQTKNHVLDIFEDVIPSIQVYGWLTMT 59
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 241 KDEYVLQKSNIIEE---KSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDK 387
K E + Q IIEE + +LE+ + ESSA+ + N + ++ + EDK
Sbjct: 510 KTETIAQLEQIIEELHEELRSLEEESIKESSATQQNENQHKRSSRKLLYEDK 561
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/76 (19%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 238 IKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITED--KNDSKTKKR 411
+ +E L K E+ E++K+ E + + + + + +++D K K KK+
Sbjct: 886 LAEEEALLKEKQERERQLQEERQKMQEEVLEWRKSQQKASEDDMSLSDDEEKQSGKKKKK 945
Query: 412 GQNKSRPKIFKDGKES 459
+ K + K ++ +S
Sbjct: 946 DRKKRKSKSKQESSDS 961
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 298 EKRKLDESSASFDDN--NLEFKKTKIEITEDKNDSKTKKRGQNKSR 429
+KRK ESS +D E K+ K E ++K + K KK + K +
Sbjct: 426 KKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKKEKKEKKEKKK 471
>SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 478
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 205 NMKNSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKT---KIEI 375
NM N+ A + DEYV ++ + ++S DDN+ E +IE+
Sbjct: 197 NMDNTTAFYDSDHDEYVSYGGKRASRDKIRMQAKLGIKASTQKDDNDFELLNNTTGEIEV 256
Query: 376 TEDKNDSK 399
T++ N+ +
Sbjct: 257 TKELNEEQ 264
>SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 652 DRNHIDKQFLSGIFHELYRHGIDLQ 578
DR+ I+ +LSG+ +L HG +LQ
Sbjct: 46 DRSSINNAYLSGMQEDLKMHGNELQ 70
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 26.2 bits (55), Expect = 4.2
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 313 DESSASFDD-NNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPTILDVE 489
+E+S S DD N++ + + E T D S K+G+ R K + K ++ T D
Sbjct: 441 NETSESDDDANSISSMENEEERTSDSKSSA--KQGKGNGRAKETPEEKRARKKKTKEDKA 498
Query: 490 SSEQLKICQYNNCKFIHDS 546
+ KI +Y + + S
Sbjct: 499 EKRKSKIPKYEKKRKLKQS 517
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 26.2 bits (55), Expect = 4.2
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = +1
Query: 505 KICQYNNCKFIHDSXQFLNSKPKDIGDQ-----CHVYKVRGKCPXGIACRY 642
K +NN ++ +FL K++G+ C Y G C G ACR+
Sbjct: 180 KYLYWNNKSYLLKKKRFL----KEVGNSPSAVYCRYYNANGICGKGAACRF 226
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1052
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +1
Query: 202 INMKNSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEI 375
I+M +NA ++ E + + + E + ++EK +L++ +D NL + IEI
Sbjct: 893 ISMTETNAVDDEVQAENSILQDEVEETRQDDIEKDELEDIKEVKEDENLTTLEETIEI 950
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 364 KIEITEDKNDSKTKKRGQ-NKSRPKIFKDGKESKPCP 471
++ + +D+ K++ Q NK +P F G SKP P
Sbjct: 219 RVPVNASWSDAGRKEKSQENKPKPTPFGSGGPSKPTP 255
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 416 KTNLDQKYSKMARKAN--HVPLSLMSNLQNN*KFVNIII 526
+TNL + ++ + H+P L+SN + KF+NI++
Sbjct: 612 ETNLPTFFDQLKKNLTLFHIPQFLLSNESTSSKFLNILL 650
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +1
Query: 295 LEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKESKP 465
+EK +E N + K KIE +D+++ K KK + K ++ ++KP
Sbjct: 214 VEKEVPEEEETEEVKNEEDDKAPKIEEVDDESEKKEKKTKKVKETTTETEELNKTKP 270
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 352 ILNCYHQMKRNSHLVYVFQDCMIFLQL 272
+LNCY + ++ V VF+D +IF ++
Sbjct: 414 LLNCYSLLNVLANYVVVFKDRLIFQEI 440
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 25.4 bits (53), Expect = 7.3
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +1
Query: 262 KSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKI---EITEDKNDSKTKKRGQNKSRP 432
++N+ E+ EK DE++ + ++E K TKI + + + D K K+ ++
Sbjct: 411 EANLEEKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEAND 470
Query: 433 KIFK-DGKESKPCPTILDVESSE 498
K K D KE++ + + ES E
Sbjct: 471 KDEKTDSKETE--DKVEETESKE 491
>SPBP8B7.22 |erd2||HDEL receptor|Schizosaccharomyces pombe|chr
2|||Manual
Length = 212
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = -2
Query: 319 SHLVYVFQDCMIFLQLCWIFVTHIHLLLHKLLRWNSSYLCVML 191
SHL+++ +L L W + + + L+ + + SY+C ++
Sbjct: 36 SHLLFLLVYVTRYLNLFWRYKSLYYFLMRIVFIASESYICYLM 78
>SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ysh1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 25.0 bits (52), Expect = 9.6
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 442 KDGKESKPCPTILDVESSEQLKICQYNNCKFIHDSXQFLN-SKPKDIGDQCHVYKVRGK 615
K+ E P + +E + K N C+ D +F+N ++G CHV + +GK
Sbjct: 5 KEFDEDAPVDPSVSLEFTIFYKGLLSNQCQ---DLLEFINLGAGNEVGRSCHVIQYKGK 60
>SPCC757.02c |||epimarase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 405
Score = 25.0 bits (52), Expect = 9.6
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +1
Query: 436 IFKDGKESKPCPTILDVESSEQLKICQYNNCKFIHDSXQFLNSKPKDIGDQCHVYKVRG 612
I K E C TI + S LK +Y K H S LN +PKDI + + V+G
Sbjct: 21 IIKRLSEDDNCKTIHCI--SRSLKD-EYPR-KIKHHSIDLLNEEPKDIAKKFSLEGVKG 75
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 25.0 bits (52), Expect = 9.6
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 256 LQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKN-DSKTKKRGQNK 423
LQK E S+++ + SA+F+D +L K T+ +I +N S + G +K
Sbjct: 69 LQKHLNTETPSFSVSIENPSKPSAAFNDASLGKKSTEHQIDGIRNGSSNLQMEGNDK 125
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,329,537
Number of Sequences: 5004
Number of extensions: 42217
Number of successful extensions: 204
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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