Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_H21
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 62 5e-10
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 36 0.022
SB_28346| Best HMM Match : BOP1NT (HMM E-Value=8.2e-14) 34 0.089
SB_16296| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 33 0.15
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_22046| Best HMM Match : PPV_E1_N (HMM E-Value=0.61) 32 0.36
SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3) 31 1.1
SB_41880| Best HMM Match : TolA (HMM E-Value=2.2) 31 1.1
SB_12740| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_55587| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.13) 30 1.4
SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3) 30 1.4
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13) 30 1.4
SB_23567| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00019) 30 1.9
SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 29 2.5
SB_27034| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_7841| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_19734| Best HMM Match : RNA_pol_Rpb1_5 (HMM E-Value=0) 29 3.3
SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_12111| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_57479| Best HMM Match : PKD_channel (HMM E-Value=0) 29 4.4
SB_45794| Best HMM Match : zf-CCCH (HMM E-Value=3.1e-27) 29 4.4
SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15) 29 4.4
SB_15300| Best HMM Match : HemolysinCabind (HMM E-Value=8.9) 29 4.4
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_38061| Best HMM Match : DUF995 (HMM E-Value=4) 28 5.8
SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069) 28 5.8
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_15331| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_1367| Best HMM Match : EGF_2 (HMM E-Value=5.3e-06) 28 7.7
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 61.7 bits (143), Expect = 5e-10
Identities = 34/95 (35%), Positives = 44/95 (46%)
Frame = +1
Query: 370 EITEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPTILDVESSEQLKICQYNNCKFIHDSX 549
E T+ K K RG N+ RP+ + SK C E + C Y HD
Sbjct: 35 EHTDGPPRKKKKNRGMNRQRPRDQRPDNSSKLCSFAARGEECTRGDSCFYG-----HDPQ 89
Query: 550 QFLNSKPKDIGDQCHVYKVRGKCPXGIACRYGSDH 654
+FL +K DIG +C + GKCP GI+CRY H
Sbjct: 90 KFLETKEPDIGKECVNFLKSGKCPYGISCRYWKHH 124
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +1
Query: 256 LQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPK 435
+QK EE+S + E++K + SS K+ K + +DK D K ++ P+
Sbjct: 463 IQKERTEEEESSSKEEKKQESSSKEEKKQESSSKEEKKQEKDDKKDDKEGRKASKSPAPR 522
Query: 436 IFKDGKESKPCP 471
++ KP P
Sbjct: 523 SDSRKEKEKPAP 534
>SB_28346| Best HMM Match : BOP1NT (HMM E-Value=8.2e-14)
Length = 258
Score = 34.3 bits (75), Expect = 0.089
Identities = 20/86 (23%), Positives = 42/86 (48%)
Frame = +1
Query: 244 DEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNK 423
D + + + +EE N+E+ D+++ +NN+E K + K +++ K+
Sbjct: 52 DSHGEEDDDDVEEDEDNIEEDDDDDANKDSKENNIEHDKN----DDQKKNTERGKKPSKV 107
Query: 424 SRPKIFKDGKESKPCPTILDVESSEQ 501
+ P I KD K + + D E+S++
Sbjct: 108 NTPNIIKDNKLREAEKDVDDTETSDE 133
>SB_16296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/99 (23%), Positives = 46/99 (46%)
Frame = +1
Query: 205 NMKNSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITED 384
N KNS+ E + +K+N +EE + ++ + + + +++ K+TK + TE
Sbjct: 1011 NRKNSDQQNGKQTKENIHKKNNPVEESYPGKPRVNNNDYNNTTTEQSVKTKQTKQQETEG 1070
Query: 385 KNDSKTKKRGQNKSRPKIFKDGKESKPCPTILDVESSEQ 501
+ +SK G+ K+ P + C L + S+Q
Sbjct: 1071 RRESKKNSSGKQKNVPTALAESMHCS-CSLPLKTQVSDQ 1108
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 33.5 bits (73), Expect = 0.15
Identities = 26/98 (26%), Positives = 42/98 (42%)
Frame = +1
Query: 247 EYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKS 426
EY +EKS +KRK ++ + DD E KT+ + ED D + + +
Sbjct: 1518 EYEAMMKAAADEKSKEKKKRKKEDEATRSDDGTDE--KTEDSMQEDAKDLDSSNTASDTT 1575
Query: 427 RPKIFKDGKESKPCPTILDVESSEQLKICQYNNCKFIH 540
+ K GK + T+L+ E L C + F+H
Sbjct: 1576 KEK----GKNKEKDKTVLE-RWEESLMACTSLSQVFVH 1608
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 211 KNSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKN 390
K+SN G I ++ +K + + K ++ +K+K + + K + E ++DK
Sbjct: 138 KDSNEGSLTISNDLNSEKKDKKKHKKHSKDKKKKKHKKEKKREKDKHKHKQEKESSDDKP 197
Query: 391 DS-KTKKRGQNKSRPKIFKDGKESK 462
D T K+ K PK DG+E K
Sbjct: 198 DELSTPKKISEKGSPK--GDGRERK 220
>SB_22046| Best HMM Match : PPV_E1_N (HMM E-Value=0.61)
Length = 362
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 265 SNIIEEKSYNLEKRKLDESSASFDDNN-LEFKKTKIEITEDKNDSKTKKRGQNKSRPKIF 441
+N+ EK Y + +L + + DD + +E K ++ I++ + +++ G+N P+I
Sbjct: 240 NNVAVEKKYTINAEELHGTGGTIDDRDAMEGGKGEVYISQIEEENENGNEGENAIPPEIP 299
Query: 442 KDGKESK 462
D +K
Sbjct: 300 PDQDNTK 306
>SB_52452| Best HMM Match : Borrelia_orfA (HMM E-Value=1.3)
Length = 471
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 283 KSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDG--KE 456
K N +++K E + DN KK E +ED+ +K++ + + + K +G K+
Sbjct: 259 KPKNKKRKKKKEKKTNETDNESSIKKKSCEDSEDEEHLPSKEKKKKRKKSKDSSEGYIKQ 318
Query: 457 SK 462
SK
Sbjct: 319 SK 320
>SB_41880| Best HMM Match : TolA (HMM E-Value=2.2)
Length = 374
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/84 (21%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Frame = +1
Query: 241 KDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKN-----DSKTK 405
++ +L++ ++ + + ++++E D+ ++ K+ ++EI EDK + T+
Sbjct: 203 EENRILEEEERVKREEEEKKAKEVEEKRMGEDEEQIKLKEEEVEIKEDKTAELELEETTE 262
Query: 406 K----RGQNKSRPKIFKDGKESKP 465
K + +N S KI K +E P
Sbjct: 263 KSNHAKRENLSPSKIHKKDREKTP 286
>SB_12740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/109 (21%), Positives = 49/109 (44%)
Frame = +1
Query: 235 AIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRG 414
++ DEY +++ +E+ + + E+++SF DN++ + KI +++N +
Sbjct: 388 SLADEY--KQALYVEDNTQTIGVEGRVENNSSFIDNSVCIEFLKISQQDNQNLDSSHSMH 445
Query: 415 QNKSRPKIFKDGKESKPCPTILDVESSEQLKICQYNNCKFIHDSXQFLN 561
+ K+ FKD S +D+ + Q +F +FLN
Sbjct: 446 ETKN----FKDSVTSSHSIASIDITPGNAYMLAQTKPDEFASQDQEFLN 490
>SB_55587| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.13)
Length = 359
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 376 TEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPTILDVESSEQLK 507
+E + + KK+GQNK + +GKESK L+ + +++K
Sbjct: 187 SEWEKERVAKKKGQNKIDDPVETNGKESKDIERFLEWDQEQKVK 230
>SB_57515| Best HMM Match : CBFNT (HMM E-Value=3.3)
Length = 213
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 277 EEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKE 456
++K + +K + S + DD + +KT+I + E+K + K+ + P DGKE
Sbjct: 138 KDKESDKDKAGSETSLNAADDEETK-EKTEIAVEEEKEGEEFKREEAAEETPAEVADGKE 196
Query: 457 SK 462
K
Sbjct: 197 KK 198
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +1
Query: 208 MKNSNAGVCAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDK 387
+KN AGV KDE + K I + EK+ + DDN E + ++ +++
Sbjct: 2772 IKNLEAGVRTAKDETRMDKKRIATLEVEYAEKQGMARDLEKMDDNLTELRLKYDDLVKER 2831
Query: 388 NDSKT 402
+ K+
Sbjct: 2832 EEVKS 2836
>SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13)
Length = 562
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 241 KDEYVLQKSNIIEEKSYNLEKR-----KLDESSASFDDNNLEFKKTKIEITEDKNDSKTK 405
K L+K + +EK + +R K DE +D+ E K + E ED+ +
Sbjct: 464 KKSRTLRKLTVAKEKGASERRRRGRSPKSDEQKKKDEDSKPEEAKPE-EPKEDEKSKPEE 522
Query: 406 KRGQNKSRPKIFKDGKESKPCPTILDVES 492
+ + +++P+ K +E+KP T ++ E+
Sbjct: 523 TKAEEEAKPEAPKAEEEAKPGETKVEEEA 551
>SB_23567| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00019)
Length = 653
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 439 FKDGKESKPCPTILDVESSEQLKICQYNNCKFIHDSXQFLNSKPKDIGDQCH 594
+K K SK PT+++V +S Q I N+ + Q + KP D G H
Sbjct: 486 YKPLKRSKITPTVINVATSSQTNITDVNSISKKQYTEQVNDLKPDDSGLCAH 537
>SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +1
Query: 244 DEYVLQKS----NIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKR 411
DE ++ K NI E + +L ++++ +D+ N T + + K+D KT ++
Sbjct: 824 DEMIMDKPPPQINITETQDNSLGDLQIEDVEERYDEENTTIGPTATTVEQPKDDKKT-RQ 882
Query: 412 GQNKSRPK 435
G+ PK
Sbjct: 883 GRKTPAPK 890
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +1
Query: 337 DNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPTILDVESSEQLK 507
D++ E +T+ E ++K KK+G NK + +GKESK L+ + +++K
Sbjct: 1363 DSDSEATETESEWEKEK---VAKKKGHNKIDDPVETNGKESKDIERFLEWDQEQKVK 1416
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 29.5 bits (63), Expect = 2.5
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +1
Query: 241 KDEYVLQKSNIIEEK-SYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQ 417
KD+ +K EEK + E++K+++S S D ++T +E E K D + G+
Sbjct: 1599 KDDTASEKKESSEEKMEVDGEEQKVEKSPESVDKTE-GHERTDVEDDEKKADDSNEDIGK 1657
Query: 418 NKSRPKIFKDGK--ESKPCPTILDVESSEQ 501
+D K ESK D ES ++
Sbjct: 1658 KDESRDQAEDAKKEESKTEEMETDAESKQE 1687
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 29.5 bits (63), Expect = 2.5
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +1
Query: 241 KDEYVLQKSNIIEEK-SYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQ 417
KD+ +K EEK + E++K+++S S D ++T +E E K D + G+
Sbjct: 178 KDDTASEKKESSEEKMEVDGEEQKVEKSPESVDKTE-GHERTDVEDDEKKADDSNEDIGK 236
Query: 418 NKSRPKIFKDGK--ESKPCPTILDVESSEQ 501
+D K ESK D ES ++
Sbjct: 237 KDESRDQAEDAKKEESKTEEMETDAESKQE 266
>SB_27034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 629
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 259 QKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSR 429
Q+ N E SY++EK D+ + DD+N ++ + + E + N+SK K K R
Sbjct: 168 QQRNRPAEVSYDIEKSDYDDDNG--DDDNYDYDEEE-ESNINNNESKKKASSNLKER 221
>SB_7841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +1
Query: 280 EKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKES 459
+K + + K ++D+ + N EF+K +E ++ +D + KKR + + R + G +
Sbjct: 5 DKEFRMTKEEVDKLEKAM--KNEEFRKLLVEYAQEISDPENKKRYEEEIRQMENERGMDV 62
Query: 460 K 462
K
Sbjct: 63 K 63
>SB_19734| Best HMM Match : RNA_pol_Rpb1_5 (HMM E-Value=0)
Length = 1452
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/61 (22%), Positives = 33/61 (54%)
Frame = +1
Query: 262 KSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIF 441
K+N +E K + +++ + L F+ +E + K+D+ +K G++K++ ++F
Sbjct: 439 KANKLESKIHKWQRKHPSVDKQNRTSAFLAFEADNLEEVQGKHDTVPEKFGRSKAQLELF 498
Query: 442 K 444
K
Sbjct: 499 K 499
>SB_5593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 235 AIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFD-DNNLEFKKTKIEITEDKNDSKTKKR 411
AIK++ + ++ +E+ + R +DE+S++ D D L ++ + + N +R
Sbjct: 62 AIKNQNLRDQAARLEKFDGHTSARNIDENSSNIDTDELLSSGSSQTPTSAEYNQYNENER 121
Query: 412 GQNKSRPKIFK 444
QN + P F+
Sbjct: 122 RQNANLPPTFR 132
>SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 289 YNLEKRKLDESSASFDDNNLEFKK--TKIEITEDKNDSKTKKRGQNKSRPKIFKDGKESK 462
+N+E + + + ++N + K+ +IE ++ K T+ + Q++SRPK +GK+
Sbjct: 594 HNIESQNNPKGGSHRSESNSKTKRGPKRIEESQSKPKRDTEGKEQSQSRPKGDTEGKDES 653
Query: 463 PCPTILDVESSEQL 504
D E+L
Sbjct: 654 QQKPKGDTGGKEEL 667
>SB_12111| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 340 NNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKD 447
NN+ KK K + N+ + K G K+ PK+ +D
Sbjct: 36 NNVSMKKDKALLMIGSNEFEFKASGTRKNMPKVIRD 71
>SB_57479| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 939
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Frame = +1
Query: 259 QKSNIIEEKSYNLEKRKLD------ESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQN 420
+K++II E+ +E + D S S D+ + K EDK D+ T++R +N
Sbjct: 26 EKASIIGEEQEAVEDKGKDFGSDDEPGSVSIGDDGTDLVKNDELEPEDKVDNSTQERAEN 85
Query: 421 KSRPKIFKDGKESKPCPTILDVESSEQLK 507
+ G KP E ++ K
Sbjct: 86 REDKVKIDPGANDKPSENSQGKEEKKKKK 114
>SB_45794| Best HMM Match : zf-CCCH (HMM E-Value=3.1e-27)
Length = 527
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +1
Query: 496 EQLKICQYNN-CKFIHDSXQF--LNSKPKDIGDQCHVYKVRGKCPXGIACRY 642
E+ C+Y + C+F H + L PK + C + G CP G C +
Sbjct: 164 EESGTCKYGDKCQFAHGYHELRQLARHPKYKTELCRTFHTIGFCPYGPRCHF 215
>SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15)
Length = 1605
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 232 CAIKDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKR 411
C + +YV +E KSY+ K + S+ D L+FK ++ E +N+ T +
Sbjct: 1305 CNVMSKYVKFNDPSLE-KSYSNRKIPIYVLYESYADGKLDFKMEPLQALEHRNEFTTYEL 1363
Query: 412 G 414
G
Sbjct: 1364 G 1364
>SB_15300| Best HMM Match : HemolysinCabind (HMM E-Value=8.9)
Length = 159
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +1
Query: 316 ESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPTILDVESS 495
+ SFD + KK K+E+ + +D++ N + + D KE K T+ D+ +
Sbjct: 3 DDGMSFDPTKKKKKKKKVELDLEADDAEDTI--SNSAPEEQATDNKEEKGTITLHDITDA 60
Query: 496 EQ 501
EQ
Sbjct: 61 EQ 62
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 286 SYNLEKRKLDESSASFDDNN---LEFKKTKIEITEDKNDSKTK-KRGQNKSRPK 435
++N+ K+KL E A ++ N E K+ KI + E+ +K + + + RPK
Sbjct: 1317 NHNITKKKLQEEQAKREERNKLFKELKQRKISVDEEVEQAKDELMKSLDARRPK 1370
>SB_38061| Best HMM Match : DUF995 (HMM E-Value=4)
Length = 220
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/71 (22%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 292 NLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSK-TKKRGQNKSRPKIFKDGKESKPC 468
N+EK + D +S+ ++ + ++ + ++ND K T+K +K++ K+ K ++ K
Sbjct: 105 NMEKNEHDGNSSDSGNSEVTEQEHDEDANSEENDDKPTRKTKLDKAQRKLNKRLRQKKKN 164
Query: 469 PTILDVESSEQ 501
+ + E +E+
Sbjct: 165 KNVANGEENER 175
>SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1449
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 379 EDKNDSKTKKRGQNKSRPKIFKDGKESKPCPT 474
E + D K KKR + K R K + S CP+
Sbjct: 1191 EHRKDKKKKKRSEEKERKKHKLEAASSSACPS 1222
>SB_35536| Best HMM Match : zf-C2H2 (HMM E-Value=0.0069)
Length = 657
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/89 (20%), Positives = 43/89 (48%)
Frame = +1
Query: 241 KDEYVLQKSNIIEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQN 420
+DE + N +E Y+ ++ E A+ DD++ K K++ T+D+ + K+R +
Sbjct: 168 RDEMARELDNAKKELQYH---KQTTEECATADDDDYAMLKLKLKSTKDELFTYQKRRNEY 224
Query: 421 KSRPKIFKDGKESKPCPTILDVESSEQLK 507
+ + + ++ T+ + E++K
Sbjct: 225 EEKLNALLEKEKIVEMTTLQLEDEKEKIK 253
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 298 EKRKLDESSASFDDNNLEFK-KTKIEITEDKNDSKTKKRGQNKSRPKIFKDGKESKPCPT 474
+KRK +E S D+ E + + + E E K D+KT ++ P + KE++P
Sbjct: 1057 KKRKEEEESKKKDEKEKEEEDEDEEEEEEKKEDAKTDDSETKEAEP----ESKEAEPESK 1112
Query: 475 ILDVESSEQLK 507
+ ES E+ K
Sbjct: 1113 EAEPESKEETK 1123
>SB_15331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 27.9 bits (59), Expect = 7.7
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 262 KSNIIEEKSYNLEKRKLDESSASFDDNNLE--FKKTKIEITEDKNDSKTKKRGQNKSRPK 435
K + I EKS+ K+K D+SS + L+ KK+K + DSK K + + K K
Sbjct: 135 KPDKINEKSHVKAKKKKDKSSVPGNTEKLKRHLKKSKEKTKTPTADSKVKIK-EEKVEKK 193
Query: 436 IFK 444
I K
Sbjct: 194 IEK 196
>SB_1367| Best HMM Match : EGF_2 (HMM E-Value=5.3e-06)
Length = 776
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/83 (19%), Positives = 31/83 (37%)
Frame = +1
Query: 274 IEEKSYNLEKRKLDESSASFDDNNLEFKKTKIEITEDKNDSKTKKRGQNKSRPKIFKDGK 453
+E+ Y+ + +E D +LE+ + +I K K +D
Sbjct: 587 VEDSVYSDDIIDHEERGFFVDQKDLEYTQIRIRSRRSIGKEPISKENATKICKSFIEDSV 646
Query: 454 ESKPCPTILDVESSEQLKICQYN 522
K C + +E S +K C ++
Sbjct: 647 TGKVCKRVSGIEFSSFIKDCVFD 669
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,403,566
Number of Sequences: 59808
Number of extensions: 294722
Number of successful extensions: 1173
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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