SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_H19
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF181648-1|AAD55434.1|  783|Drosophila melanogaster BcDNA.GH1255...    85   8e-17
AE014134-1659|AAN10698.1|  744|Drosophila melanogaster CG4389-PC...    85   8e-17
AE014134-1658|AAN10697.1|  744|Drosophila melanogaster CG4389-PB...    85   8e-17
AE014134-1657|AAF52789.1|  783|Drosophila melanogaster CG4389-PA...    85   8e-17
AY061252-1|AAL28800.1|  280|Drosophila melanogaster LD18769p pro...    31   1.4  
AE014134-1724|AAF52829.1|  280|Drosophila melanogaster CG4594-PA...    31   1.4  
AY071389-1|AAL49011.1|  288|Drosophila melanogaster RE44177p pro...    31   1.8  
AF005239-1|AAC23709.1|  460|Drosophila melanogaster DEAD-box hel...    31   1.8  
BT011480-1|AAR99138.1|  287|Drosophila melanogaster RE09736p pro...    30   2.4  
AE014134-1725|AAF52830.2|  287|Drosophila melanogaster CG4592-PA...    30   2.4  
BT023151-1|AAY55567.1|  337|Drosophila melanogaster IP10831p pro...    30   3.1  
AE014297-4042|AAF56650.1|  337|Drosophila melanogaster CG17192-P...    30   3.1  
X73220-1|CAA51690.1|  463|Drosophila melanogaster Rlb1 protein.        28   9.6  
X73219-2|CAA51688.1|  463|Drosophila melanogaster Rlb1 protein.        28   9.6  
X73216-1|CAA51684.1|  463|Drosophila melanogaster Rlb1 protein.        28   9.6  
DQ062778-1|AAY56651.1|  458|Drosophila melanogaster Rlb protein.       28   9.6  
AY119200-1|AAM51060.1|  463|Drosophila melanogaster SD13613p pro...    28   9.6  
AY061165-1|AAL28713.1|  493|Drosophila melanogaster LD13176p pro...    28   9.6  
AY060953-1|AAL28501.1|  225|Drosophila melanogaster GM08734p pro...    28   9.6  
AE014297-954|AAF54389.1|  463|Drosophila melanogaster CG8161-PA ...    28   9.6  
AE014296-2650|AAF49528.3|  493|Drosophila melanogaster CG5151-PA...    28   9.6  
AE014296-2649|AAS64987.1|  695|Drosophila melanogaster CG5151-PB...    28   9.6  

>AF181648-1|AAD55434.1|  783|Drosophila melanogaster BcDNA.GH12558
           protein.
          Length = 783

 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 34/67 (50%), Positives = 49/67 (73%)
 Frame = +3

Query: 213 PASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGK 392
           P +  H   K+VNGV V+ +DSPN KVNSL ++V +E   ++ ++ETN  + +AV+ISGK
Sbjct: 46  PVANKHLHTKVVNGVLVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSAVLISGK 105

Query: 393 PGCFIAG 413
           PGCF+AG
Sbjct: 106 PGCFVAG 112



 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 24/47 (51%), Positives = 32/47 (68%)
 Frame = +1

Query: 412 GADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLG 552
           GADI M+E C+T EE   +S     +F R+E+S+KP +AAI G CLG
Sbjct: 112 GADIGMLEACQTAEEATLISHGAQVMFDRMERSKKPIVAAISGVCLG 158



 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = +2

Query: 578 CKYRIAVKDSXTGFGLPXVMLGLLP 652
           C YRIA KDS T  GLP VMLGLLP
Sbjct: 167 CHYRIATKDSKTKLGLPEVMLGLLP 191


>AE014134-1659|AAN10698.1|  744|Drosophila melanogaster CG4389-PC,
           isoform C protein.
          Length = 744

 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 34/67 (50%), Positives = 49/67 (73%)
 Frame = +3

Query: 213 PASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGK 392
           P +  H   K+VNGV V+ +DSPN KVNSL ++V +E   ++ ++ETN  + +AV+ISGK
Sbjct: 7   PVANKHLHTKVVNGVLVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSAVLISGK 66

Query: 393 PGCFIAG 413
           PGCF+AG
Sbjct: 67  PGCFVAG 73



 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 24/47 (51%), Positives = 32/47 (68%)
 Frame = +1

Query: 412 GADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLG 552
           GADI M+E C+T EE   +S     +F R+E+S+KP +AAI G CLG
Sbjct: 73  GADIGMLEACQTAEEATLISHGAQVMFDRMERSKKPIVAAISGVCLG 119



 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = +2

Query: 578 CKYRIAVKDSXTGFGLPXVMLGLLP 652
           C YRIA KDS T  GLP VMLGLLP
Sbjct: 128 CHYRIATKDSKTKLGLPEVMLGLLP 152


>AE014134-1658|AAN10697.1|  744|Drosophila melanogaster CG4389-PB,
           isoform B protein.
          Length = 744

 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 34/67 (50%), Positives = 49/67 (73%)
 Frame = +3

Query: 213 PASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGK 392
           P +  H   K+VNGV V+ +DSPN KVNSL ++V +E   ++ ++ETN  + +AV+ISGK
Sbjct: 7   PVANKHLHTKVVNGVLVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSAVLISGK 66

Query: 393 PGCFIAG 413
           PGCF+AG
Sbjct: 67  PGCFVAG 73



 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 24/47 (51%), Positives = 32/47 (68%)
 Frame = +1

Query: 412 GADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLG 552
           GADI M+E C+T EE   +S     +F R+E+S+KP +AAI G CLG
Sbjct: 73  GADIGMLEACQTAEEATLISHGAQVMFDRMERSKKPIVAAISGVCLG 119



 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = +2

Query: 578 CKYRIAVKDSXTGFGLPXVMLGLLP 652
           C YRIA KDS T  GLP VMLGLLP
Sbjct: 128 CHYRIATKDSKTKLGLPEVMLGLLP 152


>AE014134-1657|AAF52789.1|  783|Drosophila melanogaster CG4389-PA,
           isoform A protein.
          Length = 783

 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 34/67 (50%), Positives = 49/67 (73%)
 Frame = +3

Query: 213 PASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGK 392
           P +  H   K+VNGV V+ +DSPN KVNSL ++V +E   ++ ++ETN  + +AV+ISGK
Sbjct: 46  PVANKHLHTKVVNGVLVIKIDSPNAKVNSLGSEVSDEFERVIKDLETNPAVNSAVLISGK 105

Query: 393 PGCFIAG 413
           PGCF+AG
Sbjct: 106 PGCFVAG 112



 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 24/47 (51%), Positives = 32/47 (68%)
 Frame = +1

Query: 412 GADISMIENCKTKEEVVSLSKRGHEIFRRIEQSRKPYIAAIQGSCLG 552
           GADI M+E C+T EE   +S     +F R+E+S+KP +AAI G CLG
Sbjct: 112 GADIGMLEACQTAEEATLISHGAQVMFDRMERSKKPIVAAISGVCLG 158



 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 19/25 (76%), Positives = 19/25 (76%)
 Frame = +2

Query: 578 CKYRIAVKDSXTGFGLPXVMLGLLP 652
           C YRIA KDS T  GLP VMLGLLP
Sbjct: 167 CHYRIATKDSKTKLGLPEVMLGLLP 191


>AY061252-1|AAL28800.1|  280|Drosophila melanogaster LD18769p
           protein.
          Length = 280

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
 Frame = +3

Query: 153 ILRSR-KELFISGVHSRKYAVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVS 329
           +LRS    L   G  SR  +        +     G+  +T++ P   VNS N Q++ ++ 
Sbjct: 1   MLRSNFLRLMAHGAPSRLMSTATKLTTVEINDKTGIATLTMNRP--PVNSQNVQLLLDLQ 58

Query: 330 NIVNEIETNSGIEAAVIISGKPGCFIAG 413
             ++EIE N      ++ S     F AG
Sbjct: 59  TSISEIENNKS-RGLILTSASSNVFSAG 85


>AE014134-1724|AAF52829.1|  280|Drosophila melanogaster CG4594-PA
           protein.
          Length = 280

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
 Frame = +3

Query: 153 ILRSR-KELFISGVHSRKYAVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVS 329
           +LRS    L   G  SR  +        +     G+  +T++ P   VNS N Q++ ++ 
Sbjct: 1   MLRSNFLRLMAHGAPSRLMSTATKLTTVEINDKTGIATLTMNRP--PVNSQNVQLLLDLQ 58

Query: 330 NIVNEIETNSGIEAAVIISGKPGCFIAG 413
             ++EIE N      ++ S     F AG
Sbjct: 59  TSISEIENNKS-RGLILTSASSNVFSAG 85


>AY071389-1|AAL49011.1|  288|Drosophila melanogaster RE44177p
           protein.
          Length = 288

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 12/55 (21%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +3

Query: 225 VHTKCKLVNGVYVVTLDSPN-VKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIIS 386
           +H K  L+ G+Y +  ++P+ ++  +L T + +   N++ + ++ +G  AA +++
Sbjct: 78  LHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 132


>AF005239-1|AAC23709.1|  460|Drosophila melanogaster DEAD-box
           helicase protein.
          Length = 460

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 12/55 (21%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +3

Query: 225 VHTKCKLVNGVYVVTLDSPN-VKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIIS 386
           +H K  L+ G+Y +  ++P+ ++  +L T + +   N++ + ++ +G  AA +++
Sbjct: 78  LHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLA 132


>BT011480-1|AAR99138.1|  287|Drosophila melanogaster RE09736p
           protein.
          Length = 287

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 21/86 (24%), Positives = 39/86 (45%)
 Frame = +3

Query: 156 LRSRKELFISGVHSRKYAVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNI 335
           +R  K +   G   R  A  A+   T  ++ +   + TL      VN+L  ++M ++ + 
Sbjct: 10  VRRIKPILCGGQSLRSLANGATSKLTTIEVDDRSGIATLSMNLPPVNTLTMELMHDLIDS 69

Query: 336 VNEIETNSGIEAAVIISGKPGCFIAG 413
           +N+IE+N      ++ S     F AG
Sbjct: 70  INQIESNKS-RGLILTSSNDKVFSAG 94


>AE014134-1725|AAF52830.2|  287|Drosophila melanogaster CG4592-PA
           protein.
          Length = 287

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 21/86 (24%), Positives = 39/86 (45%)
 Frame = +3

Query: 156 LRSRKELFISGVHSRKYAVPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNI 335
           +R  K +   G   R  A  A+   T  ++ +   + TL      VN+L  ++M ++ + 
Sbjct: 10  VRRIKPILCGGQSLRSLANGATSKLTTIEVDDRSGIATLSMNLPPVNTLTMELMHDLIDS 69

Query: 336 VNEIETNSGIEAAVIISGKPGCFIAG 413
           +N+IE+N      ++ S     F AG
Sbjct: 70  INQIESNKS-RGLILTSSNDKVFSAG 94


>BT023151-1|AAY55567.1|  337|Drosophila melanogaster IP10831p
           protein.
          Length = 337

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
 Frame = +3

Query: 186 GVHSRKYA---VPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETN 356
           G H   YA   V   +VHT   L   + + + D+P+ +++S       E +  V  I+TN
Sbjct: 181 GAHVAGYAGKQVGQKRVHTIVGLDPALPLFSYDNPDKRLSS-------EDAFYVESIQTN 233

Query: 357 SGIEAAVIISGKPGCFIAGG 416
            G++  V   GK   +++GG
Sbjct: 234 GGVKGFVKPIGKAAFYVSGG 253


>AE014297-4042|AAF56650.1|  337|Drosophila melanogaster CG17192-PA
           protein.
          Length = 337

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
 Frame = +3

Query: 186 GVHSRKYA---VPASQVHTKCKLVNGVYVVTLDSPNVKVNSLNTQVMEEVSNIVNEIETN 356
           G H   YA   V   +VHT   L   + + + D+P+ +++S       E +  V  I+TN
Sbjct: 181 GAHVAGYAGKQVGQKRVHTIVGLDPALPLFSYDNPDKRLSS-------EDAFYVESIQTN 233

Query: 357 SGIEAAVIISGKPGCFIAGG 416
            G++  V   GK   +++GG
Sbjct: 234 GGVKGFVKPIGKAAFYVSGG 253


>X73220-1|CAA51690.1|  463|Drosophila melanogaster Rlb1 protein.
          Length = 463

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 355 ILVLKLQSLYQASLDASLQGADISMIEN-CKTKEEVVSLSKRGHEIFRRIEQSRK 516
           I +L+L  L    +D  ++   +S  +   K +EE++  SKR  +I R  E+ RK
Sbjct: 98  IAMLRLNKLMHGLVDKFVETLKLSTTDKEAKWREEILETSKRRAKIERTEERKRK 152


>X73219-2|CAA51688.1|  463|Drosophila melanogaster Rlb1 protein.
          Length = 463

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 355 ILVLKLQSLYQASLDASLQGADISMIEN-CKTKEEVVSLSKRGHEIFRRIEQSRK 516
           I +L+L  L    +D  ++   +S  +   K +EE++  SKR  +I R  E+ RK
Sbjct: 98  IAMLRLNKLMHGLVDKFVETLKLSTTDKEAKWREEILETSKRRAKIERTEERKRK 152


>X73216-1|CAA51684.1|  463|Drosophila melanogaster Rlb1 protein.
          Length = 463

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 355 ILVLKLQSLYQASLDASLQGADISMIEN-CKTKEEVVSLSKRGHEIFRRIEQSRK 516
           I +L+L  L    +D  ++   +S  +   K +EE++  SKR  +I R  E+ RK
Sbjct: 98  IAMLRLNKLMHGLVDKFVETLKLSTTDKEAKWREEILETSKRRAKIERTEERKRK 152


>DQ062778-1|AAY56651.1|  458|Drosophila melanogaster Rlb protein.
          Length = 458

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 355 ILVLKLQSLYQASLDASLQGADISMIEN-CKTKEEVVSLSKRGHEIFRRIEQSRK 516
           I +L+L  L    +D  ++   +S  +   K +EE++  SKR  +I R  E+ RK
Sbjct: 98  IAMLRLNKLMHGLVDKFVETLKLSTTDKEAKWREEILETSKRRAKIERTEERKRK 152


>AY119200-1|AAM51060.1|  463|Drosophila melanogaster SD13613p
           protein.
          Length = 463

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 355 ILVLKLQSLYQASLDASLQGADISMIEN-CKTKEEVVSLSKRGHEIFRRIEQSRK 516
           I +L+L  L    +D  ++   +S  +   K +EE++  SKR  +I R  E+ RK
Sbjct: 98  IAMLRLNKLMHGLVDKFVETLKLSTTDKEAKWREEILETSKRRAKIERTEERKRK 152


>AY061165-1|AAL28713.1|  493|Drosophila melanogaster LD13176p
           protein.
          Length = 493

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = +3

Query: 327 SNIVNEIETN---SGIEAAVIISGKPGCFIAGG*YKHDRKLQNKGRSCQSV 470
           SN  N I +N    GIEA  +  G  G     G YK D    + G SC S+
Sbjct: 129 SNNNNSISSNVARGGIEATTLKYGNTGSGSGSGCYKGDCGNSSTGSSCSSL 179


>AY060953-1|AAL28501.1|  225|Drosophila melanogaster GM08734p
           protein.
          Length = 225

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 355 ILVLKLQSLYQASLDASLQGADISMIEN-CKTKEEVVSLSKRGHEIFRRIEQSRK 516
           I +L+L  L    +D  ++   +S  +   K +EE++  SKR  +I R  E+ RK
Sbjct: 31  IAMLRLNKLMHGLVDKFVETLKLSTTDKEAKWREEILETSKRRAKIERTEERKRK 85


>AE014297-954|AAF54389.1|  463|Drosophila melanogaster CG8161-PA
           protein.
          Length = 463

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 355 ILVLKLQSLYQASLDASLQGADISMIEN-CKTKEEVVSLSKRGHEIFRRIEQSRK 516
           I +L+L  L    +D  ++   +S  +   K +EE++  SKR  +I R  E+ RK
Sbjct: 98  IAMLRLNKLMHGLVDKFVETLKLSTTDKEAKWREEILETSKRRAKIERTEERKRK 152


>AE014296-2650|AAF49528.3|  493|Drosophila melanogaster CG5151-PA,
           isoform A protein.
          Length = 493

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = +3

Query: 327 SNIVNEIETN---SGIEAAVIISGKPGCFIAGG*YKHDRKLQNKGRSCQSV 470
           SN  N I +N    GIEA  +  G  G     G YK D    + G SC S+
Sbjct: 129 SNNNNSISSNVARGGIEATTLKYGNTGSGSGSGCYKGDCGNSSTGSSCSSL 179


>AE014296-2649|AAS64987.1|  695|Drosophila melanogaster CG5151-PB,
           isoform B protein.
          Length = 695

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = +3

Query: 327 SNIVNEIETN---SGIEAAVIISGKPGCFIAGG*YKHDRKLQNKGRSCQSV 470
           SN  N I +N    GIEA  +  G  G     G YK D    + G SC S+
Sbjct: 331 SNNNNSISSNVARGGIEATTLKYGNTGSGSGSGCYKGDCGNSSTGSSCSSL 381


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,424,109
Number of Sequences: 53049
Number of extensions: 475182
Number of successful extensions: 1086
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -